Referenced by ⇅
Year
abcADM : Fit Accumulated Damage Models and Estimate Reliability using ABC (Version 1.0)
2019
acrt : Autocorrelation Robust Testing (Version 1.0.1)
2016
AdaptiveSparsity : Adaptive Sparsity Models (Version 1.6)
2013
ADMMnet : Regularized Model with Selecting the Number of Non-Zeros (Version 0.1.1)
2015
AlphaHull3D : Alpha Hull Computation (Version 2.0.0)
2022
APAtree : Computation of the "Area Potentially Available" (APA) to Trees (Version 1.0.1)
2021
APML0 : Augmented and Penalized Minimization Method L0 (Version 0.10)
2017
BacArena : Modeling Framework for Cellular Communities in their
Environments (Version 1.8.2)
2015
bartBMA : Bayesian Additive Regression Trees using Bayesian Model
Averaging (Version 1.0)
2020
BartMixVs : Variable Selection Using Bayesian Additive Regression Trees (Version 1.0.0)
2022
Barycenter : Regularized Wasserstein Distances and Barycenters (Version 1.3.1)
2016
bayesbr : Beta Regression on a Bayesian Model (Version 0.0.1.0)
2020
BayesMRA : Bayesian Multi-Resolution Gaussian Process Approximations (Version 1.0.0)
2020
BayesSPsurv : Bayesian Spatial Split Population Survival Model (Version 0.1.4)
2020
bcp : Bayesian Analysis of Change Point Problems (Version 4.0.3)
2006
beam : Fast Bayesian Inference in Large Gaussian Graphical Models (Version 2.0.2)
2018
Biocomb : Feature Selection and Classification with the Embedded
Validation Procedures for Biomedical Data Analysis (Version 0.4)
2015
BiProbitPartial : Bivariate Probit with Partial Observability (Version 1.0.3)
2019
bmotif : Motif Analyses of Bipartite Networks (Version 2.0.2)
2018
bmrm : Bundle Methods for Regularized Risk Minimization Package (Version 4.1)
2013
BMTME : Bayesian Multi-Trait Multi-Environment for Genomic Selection
Analysis (Version 1.0.19)
2019
Boov : Boolean Operations on Volumes (Version 1.0.0)
2022
cattonum : Encode Categorical Features (Version 0.0.5)
2018
CENFA : Climate and Ecological Niche Factor Analysis (Version 1.1.1)
2018
cfbfastR : Access College Football Play by Play Data (Version 1.9.0)
2021
changepointsHD : Change-Point Estimation for Expensive and High-Dimensional
Models (Version 0.3.3)
2017
chickn : "Compressive" Hierarchical Kernel Clustering Toolbox (Version 1.2.3)
2020
climdex.pcic : PCIC Implementation of Climdex Routines (Version 1.1-11)
2011
ClustMMDD : Variable Selection in Clustering by Mixture Models for Discrete
Data (Version 1.0.4)
2015
Compack : Regression with Compositional Covariates (Version 0.1.0)
2020
cort : Some Empiric and Nonparametric Copula Models (Version 0.3.2)
2020
CSTE : Covariate Specific Treatment Effect (CSTE) Curve (Version 2.0.0)
2021
datastructures : Implementation of Core Data Structures (Version 0.2.9)
2017
deepboost : Deep Boosting Ensemble Modeling (Version 0.1.6)
2016
delaunay : 2d, 2.5d, and 3d Delaunay Tessellations (Version 2.0.0)
2022
dfpk : Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for
Phase I Clinical Trials (Version 3.5.1)
2016
diffusr : Network Diffusion Algorithms (Version 0.1.4)
2016
discretecdAlgorithm : Coordinate-Descent Algorithm for Learning Sparse Discrete
Bayesian Networks (Version 0.0.7)
2016
diseq : Estimation Methods for Markets in Equilibrium and Disequilibrium (Version 0.4.6)
2020
diveRsity : A Comprehensive, General Purpose Population Genetics Analysis
Package (Version 1.9.90)
2012
dnapath : Differential Network Analysis using Gene Pathways (Version 0.7.4)
2020
dynamichazard : Dynamic Hazard Models using State Space Models (Version 1.0.2)
2016
DynComm : Dynamic Network Communities Detection and Generation (Version 2020.1.6)
2020
dynsbm : Dynamic Stochastic Block Models (Version 0.7)
2017
ECctmc : Simulation from Endpoint-Conditioned Continuous Time Markov
Chains (Version 0.2.5)
2016
EMVS : The Expectation-Maximization Approach to Bayesian Variable
Selection (Version 1.2.1)
2018
ergmclust : ERGM-Based Network Clustering (Version 1.0.0)
2021
EstHer : Estimation of Heritability in High Dimensional Sparse Linear
Mixed Models using Variable Selection (Version 1.0)
2015
fastlogranktest : A Fast Way to Calculate the p-Value of One or Multiple
Log-Rank-Tests (Version 0.2.1)
2019
FDRSeg : FDR-Control in Multiscale Change-Point Segmentation (Version 1.0-3)
2017
ffstream : Forgetting Factor Methods for Change Detection in Streaming Data (Version 0.1.7.2)
2016
fm.index : Fast String Searching (Version 0.1.1)
2022
futureheatwaves : Find, Characterize, and Explore Extreme Events in Climate
Projections (Version 1.0.3)
2016
GenomicMating : Efficient Breeding by Genomic Mating (Version 2.0)
2017
gfpop : Graph-Constrained Functional Pruning Optimal Partitioning (Version 1.1.1)
2020
glmdisc : Discretization and Grouping for Logistic Regression (Version 0.6)
2019
gppm : Gaussian Process Panel Modeling (Version 0.2.0)
2018
gren : Adaptive Group-Regularized Logistic Elastic Net Regression (Version 0.0.1)
2018
gwfa : Geographically Weighted Fractal Analysis (Version 0.0.4)
2016
HARModel : Heterogeneous Autoregressive Models (Version 1.0)
2018
hdtg : Generate Samples from Multivariate Truncated Normal
Distributions (Version 0.2.0)
2022
hergm : Hierarchical Exponential-Family Random Graph Models (Version 4.1-10)
2010
HHG : Heller-Heller-Gorfine Tests of Independence and Equality of
Distributions (Version 2.3.7)
2013
hit : Hierarchical Inference Testing (Version 0.4.0)
2015
hmlasso : Lasso with High Missing Rate (Version 0.0.1)
2019
htdp : Horizontal Time Dependent Positioning (Version 0.1.4)
2016
iBATCGH : Integrative Bayesian Analysis of Transcriptomic and CGH Data (Version 1.3.1)
2014
iilasso : Independently Interpretable Lasso (Version 0.0.2)
2018
independence : Fast Rank-Based Independence Testing (Version 1.0.1)
2020
iptools : Manipulate, Validate and Resolve "IP" Addresses (Version 0.7.2)
2015
kernelPSI : Post-Selection Inference for Nonlinear Variable Selection (Version 1.1.1)
2019
L1mstate : L1-Regularized Multi-State Models (Version 1.0.1)
2020
lazygreedy : Applying the Lazy-Greedy Spanning Algorithm (Version 1.0)
2020
lclGWAS : Efficient Estimation of Discrete-Time Multivariate Frailty Model
Using Exact Likelihood Function for Grouped Survival Data (Version 1.0.3)
2016
ldat : Large Data Sets (Version 0.3.3)
2017
LDheatmap : Graphical Display of Pairwise Linkage Disequilibria Between SNPs (Version 1.0-6)
2005
libstableR : Fast and Accurate Evaluation, Random Number Generation and
Parameter Estimation of Skew Stable Distributions (Version 1.0.2)
2017
LinearDetect : Change Point Detection in High-Dimensional Linear Regression
Models (Version 0.1.5)
2021
linearQ : Linear Algorithm for Simulating Quantiles in Multiscale
Change-Point Segmentation Problem (Version 2.0)
2018
lvec : Out of Memory Vectors (Version 0.2.5)
2017
MapeBay : Multivariate Analysis of Variance Panel, PERMANOVA and Bayesian (Version 0.1.0)
2021
match2C : Match One Sample using Two Criteria (Version 1.2.4)
2020
MeshesTools : Some Tools for 3D Meshes (Version 1.0.0)
2022
MetaheuristicFPA : An Implementation of Flower Pollination Algorithm in R (Version 1.0)
2016
microsamplingDesign : Finding Optimal Microsampling Designs for Non-Compartmental
Pharmacokinetic Analysis (Version 1.0.8)
2018
MIDASwrappeR : Microcluster-Based Detector of Anomalies in Edge Streams (Version 0.5.1)
2020
minimaxdesign : Minimax and Minimax Projection Designs (Version 0.1.5)
2016
MinkowskiSum : Minkowski Addition Between 3D Meshes (Version 1.0.0)
2022
mixedClust : Co-Clustering of Mixed Type Data (Version 1.0.2)
2019
molic : Multivariate Outlier Detection in Contingency Tables (Version 2.0.3)
2020
MrSGUIDE : Multiple Responses Subgroup Identification using "GUIDE"
Algorithm (Version 0.1.2)
2020
mssm : Multivariate State Space Models (Version 0.1.6)
2019
mudens : Density Estimate (Version 1.3.2)
2018
mumm : Multiplicative Mixed Models using the Template Model Builder (Version 0.2.1)
2018
netchain : Inferring Causal Effects on Collective Outcomes under
Interference (Version 0.2.0)
2019
nVennR : Create n-Dimensional, Quasi-Proportional Venn Diagrams (Version 0.2.3)
2018
odeintr : C++ ODE Solvers Compiled on-Demand (Version 1.7.1)
2015
odpc : One-Sided Dynamic Principal Components (Version 2.0.5)
2017
opentimsr : An Open-Source Loader for Bruker"s timsTOF Data Files (Version 1.0.13)
2020
ordinalClust : Ordinal Data Clustering, Co-Clustering and Classification (Version 1.3.5)
2017
outerbase : Outer Product Regression (Version 0.1.0)
2022
PAMA : Rank Aggregation with Partition Mallows Model (Version 1.2.0)
2020
PAutilities : Streamline Physical Activity Research (Version 1.1.0)
2019
pcoxtime : Penalized Cox Proportional Hazard Model for Time-Dependent
Covariates (Version 1.0.4)
2021
perccal : Implementing Double Bootstrap Linear Regression Confidence
Intervals Using the "perc-cal" Method (Version 1.0)
2016
perfectphyloR : Reconstruct Perfect Phylogenies from DNA Sequence Data (Version 0.2.1)
2019
PerMallows : Permutations and Mallows Distributions (Version 1.13)
2014
pirate : Generated Effect Modifier (Version 1.0.0)
2016
pkgstats : Metrics of R Packages (Version 0.1.1)
2022
polyfreqs : Bayesian Population Genomics in Autopolyploids (Version 1.0.2)
2015
PolygonSoup : Mesh from Polygon Soup (Version 1.0.1)
2022
ProbReco : Score Optimal Probabilistic Forecast Reconciliation (Version 0.1.2)
2020
ProFound : Photometry Tools (Version 1.14.1)
2017
propr : Calculating Proportionality Between Vectors of Compositional
Data (Version 4.2.6)
2016
pseudorank : Pseudo-Ranks (Version 1.0.1)
2018
psrwe : PS-Integrated Methods for Incorporating RWE in Clinical Studies (Version 3.1)
2020
psychtm : Text Mining Methods for Psychological Research (Version 2021.1.0)
2021
ptf : Probit Tensor Factorization (Version 0.0.1)
2021
ptsuite : Tail Index Estimation for Power Law Distributions (Version 1.0.0)
2019
PWD : Time Series Regression Using the Power Weighted Densities (PWD)
Approach (Version 1.0)
2016
R.SamBada : Processing Pipeline for "SamBada" from Pre- To Post-Processing (Version 0.1.3)
2019
rankUncertainty : Methods for Working with Uncertainty in Rankings (Version 1.0.2.0)
2021
ranlip : (Version )
0
rbart : Bayesian Trees for Conditional Mean and Variance (Version 1.0)
2019
RcppDL : Deep Learning Methods via Rcpp (Version 0.0.5)
2014
RcppEigenAD : Compiles "C++" Code using "Rcpp", "Eigen" and "CppAD" to Produce
First and Second Order Partial Derivatives (Version 1.0.0)
2018
rCRM : Regularized Continual Reassessment Method (Version 0.1.1)
2018
rDppDiversity : Subset Searching Algorithm Using DPP Greedy MAP (Version 0.0.2)
2021
reclin : Record Linkage Toolkit (Version 0.1.2)
2018
recom : "Recom" REmoves COMments of Rscript File for you (Version 1.0)
2021
ReorderCluster : Reordering the Dendrogram According to the Class Labels (Version 2.0)
2014
rforensicbatwing : BATWING for Calculating Forensic Trace-Suspect Match
Probabilities (Version 1.3.1)
2013
rgeolocate : IP Address Geolocation (Version 1.4.2)
2015
riot : R Inputs/Outputs for Tractography (Version 1.1.0)
2022
Rlda : Bayesian LDA for Mixed-Membership Clustering Analysis (Version 0.2.6)
2017
rmdcev : Kuhn-Tucker and Multiple Discrete-Continuous Extreme Value
Models (Version 1.2.5)
2019
robcp : Robust Change-Point Tests (Version 0.3.7)
2019
robets : Forecasting Time Series with Robust Exponential Smoothing (Version 1.4)
2016
robFitConGraph : Graph-Constrained Robust Covariance Estimation (Version 0.4.1)
2019
rollRegres : Fast Rolling and Expanding Window Linear Regression (Version 0.1.4)
2018
rootWishart : Distribution of Largest Root for Single and Double Wishart
Settings (Version 0.4.1)
2016
RstoxData : Tools to Read and Manipulate Fisheries Data (Version 1.2.1)
2020
rTLS : Tools to Process Point Clouds Derived from Terrestrial Laser
Scanning (Version 0.2.5.6)
2021
Rvoterdistance : Calculates the Distance Between Voter and Multiple Polling
Locations (Version 1.1)
2017
SAMM : Some Algorithms for Mixed Models (Version 1.1.1)
2016
scPOP : Metrics for Benchmarking scRNA-Seq Batch Correction (Version 0.1.0)
2021
seagull : Lasso, Group Lasso, and Sparse-Group Lasso for Mixed Models (Version 1.1.0)
2020
SelvarMix : Regularization for Variable Selection in Model-Based Clustering
and Discriminant Analysis (Version 1.2.1)
2014
sequences : Generic and Biological Sequences (Version 0.5.9)
2013
SkeweDF : Optimization of Skewed Distributions with Birth-Death Processes (Version 0.1.0)
2021
smog : Structural Modeling by using Overlapped Group Penalty (Version 2.1.0)
2019
SpaCCr : Spatial Convex Clustering (Version 0.1.0)
2016
spamtree : Spatial Multivariate Trees (Version 0.2.2)
2021
SparseFactorAnalysis : Scaling Count and Binary Data with Sparse Factor Analysis (Version 1.0)
2015
spatialfusion : Multivariate Analysis of Spatial Data Using a Unifying Spatial
Fusion Framework (Version 0.6-6)
2019
SPQR : Semi-Parametric Quantile Regression (Version 0.1.0)
2022
spruce : Spatial Random Effects Clustering of Single Cell Data (Version 0.99.1)
2022
StratifiedSampling : Different Methods for Stratified Sampling (Version 0.4.1)
2021
swmmr : R Interface for US EPA"s SWMM (Version 0.9.1)
2017
TauStar : Efficient Computation and Testing of the Bergsma-Dassios Sign
Covariance (Version 1.1.4)
2015
telemac : R Interface to the TELEMAC Model Suite (Version 0.1.1)
2021
trajeR : Group Based Modeling Trajectory (Version 0.9.0.5)
2022
treeclim : Numerical Calibration of Proxy-Climate Relationships (Version 2.0.6.0)
2014
treeducken : Nested Phylogenetic Tree Simulator (Version 1.1.0)
2020
treemisc : Data Sets and Functions to Accompany "Tree-Based Methods for
Statistical Learning in R" (Version 0.0.1)
2022
treeplyr : "dplyr" Functionality for Matched Tree and Data Objects (Version 0.1.10)
2016
vennLasso : Variable Selection for Heterogeneous Populations (Version 0.1.6)
2017
vlad : Variable Life Adjusted Display and Other Risk-Adjusted Quality
Control Charts (Version 0.2.2)
2018
wellknown : Convert Between "WKT" and "GeoJSON" (Version 0.7.4)
2015
wingui : Advanced Windows Functions (Version 0.2)
2015
xtensor : Headers for the "xtensor" Library (Version 0.14.1-0)
2017
yaps : Track Estimation using YAPS (Yet Another Positioning Solver) (Version 1.2.5)
2021
ziphsmm : Zero-Inflated Poisson Hidden (Semi-)Markov Models (Version 2.0.6)
2017
cgalMeshes : R6 Based Utilities for 3D Meshes using "CGAL" (Version 1.0.0)
2022
lazyNumbers : Exact Floating-Point Arithmetic (Version 1.2.1)
2022
glmmrMCML : Markov Chain Monte Carlo Maximum Likelihood for Generalised
Linear Mixed Models (Version 0.2.2)
2023
dsfa : Distributional Stochastic Frontier Analysis (Version 2.0.2)
2022
morf : Modified Ordered Random Forest (Version 1.0.0)
2023
cgalPolygons : (Version )
0
concordancer : An "Rcpp" Implementation of Lin"s Concordance Correlation
Coefficient (CCC) (Version 1.0.2)
2023
Rpcop : Principal Curves of Oriented Points (Version 1.1)
2022
defm : Estimation and Simulation of Multi-Binary Response Models (Version 0.1-1)
2023
concrete : Continuous-Time Competing Risks Estimation using Targeted
Minimum Loss-Based Estimation (TMLE) (Version 1.0.5)
2023
NRAHDLTP : Location Tests for High-Dimensional Problems Including
Normal-Reference Approach (Version 0.1.2)
2023
gdalBindings : GDAL Classes Wrapper for Reading and Writing Raster Blocks (Version 0.1.17)
2023
gbm3 : Generalized Boosted Regression Models (Version 3.0)
2024
vyos : (Version )
0
GSNA : Gene Set Networking Analysis Package (Version 0.1.4.2)
2024
WSGeometry : Geometric Tools Based on Balanced/Unbalanced Optimal Transport (Version 1.2.1)
2021
expertsurv : Incorporate Expert Opinion with Parametric Survival Models (Version 1.3.0)
2023
fwildclusterboot : Fast Wild Cluster Bootstrap Inference for Linear Models (Version 0.13.0)
2021
liger : Lightweight Iterative Geneset Enrichment (Version 2.0.1)
2018
CARlasso : Conditional Autoregressive LASSO (Version 0.1.2)
2021
autocart : Autocorrelation Regression Trees (Version 1.4.5)
2021
fractalRegression : Performs Fractal Analysis and Fractal Regression (Version 1.2)
2021
lpme : Nonparametric Estimation of Measurement Error Models (Version 1.1.3)
2014
seqest : Sequential Method for Classification and Generalized Estimating Equations Problem (Version 1.0.1)
2020
pedmod : Pedigree Models (Version 0.2.4)
2021
supc : The Self-Updating Process Clustering Algorithms (Version 0.2.6.2)
2017
VAJointSurv : Variational Approximation for Joint Survival and Marker Models (Version 0.1.0)
2022
maxnodf : Approximate Maximisation of Nestedness in Bipartite Graphs (Version 1.0.0)
2020
slopeOP : Change-in-Slope OP Algorithm with a Finite Number of States (Version 1.0.1)
2020
gfilmm : Generalized Fiducial Inference for Normal Linear Mixed Models (Version 2.0.5)
2020
gfilogisreg : Generalized Fiducial Inference for Binary Logistic Regression Models (Version 1.0.3)
2021
netcox : Structural Learning in Cox Models with Time-Dependent Covariates (Version 1.0.1)
2023
PANPRSnext : Building PRS Models Based on Summary Statistics of GWAs (Version 1.2.0)
2023
StrucDiv : Spatial Structural Diversity Quantification in Raster Data (Version 0.2.1)
2022
rxode2et : Event Table Functions for 'rxode2' (Version 2.0.13)
2022
rxode2random : Random Number Generation Functions for 'rxode2' (Version 2.1.1)
2022
image.dlib : Image Processing Functionality using the 'dlib' Package (Version 0.1.1)
2020
landscapetools : Landscape Utility Toolbox (Version 0.5.0)
2018
rxode2parse : Parsing and Code Generation Functions for 'rxode2' (Version 2.0.19)
2022
metacoder : Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data (Version 0.3.7)
2016
myTAI : Evolutionary Transcriptomics (Version 0.9.3)
2014
sacRebleu : Metrics for Assessing the Quality of Generated Text (Version 0.1.3)
2024
rgeoda : R Library for Spatial Data Analysis (Version 0.0.10-4)
2021
spNetwork : Spatial Analysis on Network (Version 0.4.4.3)
2021
sphereTessellation : Delaunay and Voronoï Tessellations on the Sphere (Version 1.2.0)
2023
physiology : Calculate physiologic characteristics of awake and anesthetized adults, children and infants (Version 1.2.1)
2015
sgs : Sparse-Group SLOPE: Adaptive Bi-Level Selection with FDR Control (Version 0.3.0)
2023
WpProj : Linear p-Wasserstein Projections (Version 0.2.1)
2024
approxOT : Approximate and Exact Optimal Transport Methods (Version 1.1.1)
2022
iClusterVB : Fast Integrative Clustering and Feature Selection for High Dimensional Data (Version 0.1.2)
2024
publipha : Bayesian Meta-Analysis with Publications Bias and P-Hacking (Version 0.1.2)
2020
puniform : Meta-Analysis Methods Correcting for Publication Bias (Version 0.2.7)
2018
pureseqtmr : Predict Transmembrane Protein Topology (Version 1.4)
2020
purgeR : Inbreeding-Purging Estimation in Pedigreed Populations (Version 1.8.2)
2021
purrrlyr : Tools at the Intersection of 'purrr' and 'dplyr' (Version 0.0.8)
2017
pvar : Calculation and Application of p-Variation (Version 2.2.7)
2012
pwlmm : PWIGLS for Two-Level Multivariate and Multilevel Linear Models (Version 1.1.1)
2022
qGaussian : The q-Gaussian Distribution (Version 0.1.8)
2017
qad : Quantification of Asymmetric Dependence (Version 1.0.4)
2018
qbld : Quantile Regression for Binary Longitudinal Data (Version 1.0.3)
2020
qch : Query Composite Hypotheses (Version 2.0.0)
2021
qfratio : Moments and Distributions of Ratios of Quadratic Forms Using Recursion (Version 1.1.1)
2023
qgg : Statistical Tools for Quantitative Genetic Analyses (Version 1.1.2)
2019
qgraph : Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation (Version 1.9.8)
2011
qlcal : R Bindings to the Calendaring Functionality of 'QuantLib' (Version 0.0.13)
2021
qmd : Quantification of Multivariate Dependence (Version 1.1.2)
2021
qpdf : Split, Combine and Compress PDF Files (Version 1.3.4)
2019
qpmadr : Interface to the 'qpmad' Quadratic Programming Solver (Version 1.1.0-0)
2020
ABCoptim : Implementation of Artificial Bee Colony (ABC) Optimization (Version 0.15.0)
2013
ABM : Agent Based Model Simulation Framework (Version 0.4.1)
2023
ACEt : Estimating Dynamic Heritability and Twin Model Comparison (Version 1.9.0)
2016
ADMM : Algorithms using Alternating Direction Method of Multipliers (Version 0.3.3)
2017
ADMMsigma : Penalized Precision Matrix Estimation via ADMM (Version 2.1)
2018
ALFAM2 : Dynamic Model of Ammonia Emission from Field-Applied Manure (Version 4.2)
2024
ALUES : Agricultural Land Use Evaluation System (Version 0.2.1)
2022
ALassoSurvIC : Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data (Version 0.1.1)
2019
ANN2 : Artificial Neural Networks for Anomaly Detection (Version 2.3.4)
2017
APackOfTheClones : Visualization of Clonal Expansion for Single Cell Immune Profiles (Version 1.2.1)
2023
ARCokrig : Autoregressive Cokriging Models for Multifidelity Codes (Version 0.1.2)
2020
ARCensReg : Fitting Univariate Censored Linear Regression Model with Autoregressive Errors (Version 3.0.1)
2016
ASV : Stochastic Volatility Models with or without Leverage (Version 1.1.4)
2022
ATAforecasting : Automatic Time Series Analysis and Forecasting using the Ata Method (Version 0.0.60)
2021
ATNr : Run Allometric Trophic Networks Models (Version 1.1.0)
2022
AcceptReject : Acceptance-Rejection Method for Generating Pseudo-Random Observations (Version 0.1.2)
2024
AdaptGauss : Gaussian Mixture Models (GMM) (Version 1.6)
2015
AhoCorasickTrie : Fast Searching for Multiple Keywords in Multiple Texts (Version 0.1.2)
2016
AllelicSeries : Allelic Series Test (Version 0.1.0.2)
2023
AlphaPart : Partition/Decomposition of Breeding Values by Paths of Information (Version 0.9.8)
2019
AlphaSimR : Breeding Program Simulations (Version 1.6.1)
2018
Amelia : A Program for Missing Data (Version 1.8.3)
2007
AnaCoDa : Analysis of Codon Data under Stationarity using a Bayesian Framework (Version 0.1.4.4)
2018
AntMAN : Anthology of Mixture Analysis Tools (Version 1.1.0)
2019
AovBay : Classic, Nonparametric and Bayesian One-Way Analysis of Variance Panel (Version 0.1.0)
2021
Apoderoides : Prioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree (Version 3.0.0)
2024
Apollonius : 2D Apollonius Graphs (Version 1.0.1)
2023
BAMMtools : Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees (Version 2.1.12)
2014
BAMBI : Bivariate Angular Mixture Models (Version 2.3.6)
2017
BART : Bayesian Additive Regression Trees (Version 2.9.9)
2017
BCClong : Bayesian Consensus Clustering for Multiple Longitudinal Features (Version 1.0.3)
2023
BCEE : The Bayesian Causal Effect Estimation Algorithm (Version 1.3.2)
2015
BCSub : A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering) (Version 0.5)
2016
BCT : Bayesian Context Trees for Discrete Time Series (Version 1.2)
2020
BClustLonG : A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data (Version 0.1.3)
2017
BEKKs : Multivariate Conditional Volatility Modelling and Forecasting (Version 1.4.4)
2022
BET : Binary Expansion Testing (Version 0.5.4)
2020
BGGM : Bayesian Gaussian Graphical Models (Version 2.1.3)
2020
BGVAR : Bayesian Global Vector Autoregressions (Version 2.5.8)
2020
BHMSMAfMRI : Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI (fMRI) Data (Version 2.2)
2014
BHSBVAR : Structural Bayesian Vector Autoregression Models (Version 3.1.1)
2018
BIFIEsurvey : Tools for Survey Statistics in Educational Assessment (Version 3.6-6)
2014
BINtools : Bayesian BIN (Bias, Information, Noise) Model of Forecasting (Version 0.2.0)
2021
BLPestimatoR : Performs a BLP Demand Estimation (Version 0.3.4)
2017
BLSM : Bayesian Latent Space Model (Version 0.1.0)
2018
BMisc : Miscellaneous Functions for Panel Data, Quantiles, and Printing Results (Version 1.4.6)
2017
BNSL : Bayesian Network Structure Learning (Version 0.1.4)
2017
BNPmix : Bayesian Nonparametric Mixture Models (Version 1.0.2)
2019
BOSSreg : Best Orthogonalized Subset Selection (BOSS) (Version 0.2.0)
2019
BPrinStratTTE : Causal Effects in Principal Strata Defined by Antidrug Antibodies (Version 0.0.7)
2023
BSL : Bayesian Synthetic Likelihood (Version 3.2.5)
2018
BSPBSS : Bayesian Spatial Blind Source Separation (Version 1.0.5)
2022
BSSprep : Whitening Data as Preparation for Blind Source Separation (Version 0.1)
2021
BTLLasso : Modelling Heterogeneity in Paired Comparison Data (Version 0.1-13)
2015
BTM : Biterm Topic Models for Short Text (Version 0.3.7)
2018
BTYDplus : Probabilistic Models for Assessing and Predicting your Customer Base (Version 1.2.0)
2016
BTtest : Estimate the Number of Factors in Large Nonstationary Datasets (Version 0.10.3)
2023
BVSNLP : Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors (Version 1.1.9)
2017
BWStest : Baumgartner Weiss Schindler Test of Equal Distributions (Version 0.2.3)
2016
BalancedSampling : Balanced and Spatially Balanced Sampling (Version 2.0.6)
2014
Bayenet : Bayesian Quantile Elastic Net for Genetic Study (Version 0.2)
2023
BayesComm : Bayesian Community Ecology Analysis (Version 0.1-2)
2014
BayesDLMfMRI : Statistical Analysis for Task-Based Fmri Data (Version 0.0.3)
2023
BayesESS : Determining Effective Sample Size (Version 0.1.19)
2018
BayesFactor : Computation of Bayes Factors for Common Designs (Version 0.9.12-4.7)
2012
BayesGmed : Bayesian Causal Mediation Analysis using 'Stan' (Version 0.0.3)
2023
BayesGrowth : Estimate Fish Growth Using MCMC Analysis (Version 1.0.0)
2023
BayesLN : Bayesian Inference for Log-Normal Data (Version 0.2.10)
2020
BayesMFSurv : Bayesian Misclassified-Failure Survival Model (Version 0.1.0)
2019
BayesMallows : Bayesian Preference Learning with the Mallows Rank Model (Version 2.2.2)
2018
BayesPPD : Bayesian Power Prior Design (Version 1.1.2)
2021
BayesPPDSurv : Bayesian Power Prior Design for Survival Data (Version 1.0.3)
2024
BayesProject : Fast Projection Direction for Multivariate Changepoint Detection (Version 1.0)
2020
BayesRGMM : Bayesian Robust Generalized Mixed Models for Longitudinal Data (Version 2.2)
2021
BayesReversePLLH : Fits the Bayesian Piecewise Linear Log-Hazard Model (Version 1.5)
2020
BayesSUR : Bayesian Seemingly Unrelated Regression Models in High-Dimensional Settings (Version 2.2-1)
2019
BayesSenMC : Different Models of Posterior Distributions of Adjusted Odds Ratio (Version 0.1.5)
2019
BayesSurvive : Bayesian Survival Models for High-Dimensional Data (Version 0.0.2)
2024
BayesfMRI : Spatial Bayesian Methods for Task Functional MRI Studies (Version 0.3.11)
2023
BayesianPlatformDesignTimeTrend : Simulate and Analyse Bayesian Platform Trial with Time Trend (Version 1.2.3)
2023
BayesianTools : General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics (Version 0.1.8)
2017
Bayesrel : Bayesian Reliability Estimation (Version 0.7.7)
2019
BeSS : Best Subset Selection in Linear, Logistic and CoxPH Models (Version 2.0.4)
2017
BeeGUTS : General Unified Threshold Model of Survival for Bees using Bayesian Inference (Version 1.3.0)
2022
Benchmarking : Benchmark and Frontier Analysis Using DEA and SFA (Version 0.32)
2010
Bernadette : Bayesian Inference and Model Selection for Stochastic Epidemics (Version 1.1.5)
2023
Bestie : Bayesian Estimation of Intervention Effects (Version 0.1.5)
2020
BeviMed : Bayesian Evaluation of Variant Involvement in Mendelian Disease (Version 5.10)
2016
BiDAG : Bayesian Inference for Directed Acyclic Graphs (Version 2.1.4)
2017
BigQuic : Big Quadratic Inverse Covariance Estimation (Version 1.1-13)
2016
BigVAR : Dimension Reduction Methods for Multivariate Time Series (Version 1.1.2)
2016
BinSegBstrap : Piecewise Smooth Regression by Bootstrapped Binary Segmentation (Version 1.0-1)
2019
BinaryDosage : Creates, Merges, and Reads Binary Dosage Files (Version 1.0.0)
2020
Bioi : Biological Image Analysis (Version 0.2.10)
2018
BipartiteModularityMaximization : Partition Bipartite Network into Non-Overlapping Biclusters by Optimizing Bipartite Modularity (Version 1.23.120.1)
2022
BivRec : Bivariate Alternating Recurrent Event Data Analysis (Version 1.2.1)
2018
BoltzMM : Boltzmann Machines with MM Algorithms (Version 0.1.4)
2018
BondValuation : Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions (Version 0.1.1)
2018
BoostMLR : Boosting for Multivariate Longitudinal Responses (Version 1.0.3)
2020
BosonSampling : Classical Boson Sampling (Version 0.1.5)
2017
BranchGLM : Efficient Best Subset Selection for GLMs via Branch and Bound Algorithms (Version 3.0.1)
2022
Buddle : A Deep Learning for Statistical Classification and Regression Analysis with Random Effects (Version 2.0.1)
2018
BuyseTest : Generalized Pairwise Comparisons (Version 3.0.5)
2016
CAESAR.Suite : CAESAR: a Cross-Technology and Cross-Resolution Framework for Spatial Omics Annotation (Version 0.1.0)
2024
CARBayes : Spatial Generalised Linear Mixed Models for Areal Unit Data (Version 6.1.1)
2012
CARBayesST : Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data (Version 4.0)
2014
CARME : CAR-MM Modelling in Stan (Version 0.1.1)
2023
CARMS : Continuous Time Markov Rate Modeling for Reliability Analysis (Version 1.0.1)
2024
CASMAP : Detection of Statistically Significant Combinations of SNPs in Association Mapping (Version 0.6.1)
2018
CB2 : CRISPR Pooled Screen Analysis using Beta-Binomial Test (Version 1.3.4)
2019
CCMMR : Minimization of the Convex Clustering Loss Function (Version 0.2.1)
2023
CDM : Cognitive Diagnosis Modeling (Version 8.2-6)
2011
CDatanet : Econometrics of Network Data (Version 2.2.0)
2021
CERFIT : Causal Effect Random Forest of Interaction Tress (Version 0.1.0)
2022
CFC : Cause-Specific Framework for Competing-Risk Analysis (Version 1.2.0)
2015
CGGP : Composite Grid Gaussian Processes (Version 1.0.4)
2019
CKLRT : Composite Kernel Machine Regression Based on Likelihood Ratio Test (Version 0.2.3)
2018
CKMRpop : Forward-in-Time Simulation and Tallying of Pairwise Relationships (Version 0.1.3)
2021
CLVTools : Tools for Customer Lifetime Value Estimation (Version 0.11.1)
2020
CMGFM : Covariate-Augumented Generalized Factor Model (Version 1.1)
2024
CNVRG : Dirichlet Multinomial Modeling of Relative Abundance Data (Version 1.0.0)
2020
COAP : High-Dimensional Covariate-Augmented Overdispersed Poisson Factor Model (Version 1.2)
2024
COMIX : Coarsened Mixtures of Hierarchical Skew Kernels (Version 1.0.0)
2022
COMPoissonReg : Conway-Maxwell Poisson (COM-Poisson) Regression (Version 0.8.1)
2010
CPAT : Change Point Analysis Tests (Version 0.1.0)
2018
CPGLIB : Competing Proximal Gradients Library (Version 1.1.1)
2021
CRTConjoint : Conditional Randomization Testing (CRT) Approach for Conjoint Analysis (Version 0.1.0)
2022
CVR : Canonical Variate Regression (Version 0.1.1)
2017
CVXR : Disciplined Convex Optimization (Version 1.0-15)
2017
CWT : Continuous Wavelet Transformation for Spectroscopy (Version 0.2.1)
2024
CamelUp : 'CamelUp' Board Game as a Teaching Aid for Introductory Statistics (Version 2.0.3)
2019
Carlson : Carlson Elliptic Integrals and Incomplete Elliptic Integrals (Version 3.0.0)
2020
CaseBasedReasoning : Case Based Reasoning (Version 0.3)
2018
CatReg : Solution Paths for Linear and Logistic Regression Models with Categorical Predictors, with SCOPE Penalty (Version 2.0.3)
2020
CausalGPS : Matching on Generalized Propensity Scores with Continuous Exposures (Version 0.5.0)
2021
CautiousLearning : Control Charts with Guaranteed In-Control Performance and Cautious Parameters Learning (Version 1.0.1)
2019
CausalQueries : Make, Update, and Query Binary Causal Models (Version 1.2.1)
2020
CensSpatial : Censored Spatial Models (Version 3.6)
2016
ChangePointTaylor : Identify Changes in Mean (Version 0.3)
2020
ChannelAttribution : Markov Model for Online Multi-Channel Attribution (Version 2.0.7)
2015
CircSpaceTime : Spatial and Spatio-Temporal Bayesian Model for Circular Data (Version 0.9.0)
2019
CircularDDM : Circular Drift-Diffusion Model (Version 0.1.0)
2017
CircularSilhouette : Fast Silhouette on Circular or Linear Data Clusters (Version 0.0.1)
2022
Ckmeans.1d.dp : Optimal, Fast, and Reproducible Univariate Clustering (Version 4.3.5)
2010
ClinicalTrialSummary : Summary Measures for Clinical Trials with Survival Outcomes (Version 1.1.1)
2017
ClusPred : Simultaneous Semi-Parametric Estimation of Clustering and Regression (Version 1.1.0)
2021
ClusROC : ROC Analysis in Three-Class Classification Problems for Clustered Data (Version 1.0.2)
2022
ClusVis : Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering (Version 1.2.0)
2017
ClustAssess : Tools for Assessing Clustering (Version 0.3.0)
2021
ClustVarLV : Clustering of Variables Around Latent Variables (Version 2.1.1)
2013
ClusterR : Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering (Version 1.3.3)
2016
ClusterStability : Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions (Version 1.0.4)
2015
CoMiRe : Convex Mixture Regression (Version 0.8)
2020
CoOL : Causes of Outcome Learning (Version 1.1.2)
2021
CodeDepends : Analysis of R Code for Reproducible Research and Code Comprehension (Version 0.6.6)
2017
Colossus : "Risk Model Regression and Analysis with Complex Non-Linear Models" (Version 1.1.4.2)
2023
ConConPiWiFun : Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions (Version 0.4.6.1)
2013
ConsReg : Fits Regression & ARMA Models Subject to Constraints to the Coefficient (Version 0.1.0)
2020
Countr : Flexible Univariate Count Models Based on Renewal Processes (Version 3.5.8)
2016
CovTools : Statistical Tools for Covariance Analysis (Version 0.5.4)
2017
CoxPlus : Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects (Version 1.1.1)
2015
CptNonPar : Nonparametric Change Point Detection for Multivariate Time Series (Version 0.2.1)
2023
Crossover : Analysis and Search of Crossover Designs (Version 0.1-22)
2014
Cyclops : Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis (Version 3.4.1)
2016
CytoSimplex : Simplex Visualization of Cell Fate Similarity in Single-Cell Data (Version 0.1.1)
2023
DAISIE : Dynamical Assembly of Islands by Speciation, Immigration and Extinction (Version 4.4.1)
2015
DCEM : Clustering Big Data using Expectation Maximization Star (EM*) Algorithm (Version 2.0.5)
2018
DCLEAR : Distance Based Cell Lineage Reconstruction (Version 1.0.13)
2021
DCPO : Dynamic Comparative Public Opinion (Version 0.5.3)
2020
DCSmooth : Nonparametric Regression and Bandwidth Selection for Spatial Models (Version 1.1.2)
2021
DDD : Diversity-Dependent Diversification (Version 5.2.2)
2012
DDRTree : Learning Principal Graphs with DDRTree (Version 0.1.5)
2016
DEploid : Deconvolute Mixed Genomes with Unknown Proportions (Version 0.5.4)
2016
DGM : Dynamic Graphical Models (Version 1.7.4)
2018
DGP4LCF : Dependent Gaussian Processes for Longitudinal Correlated Factors (Version 1.0.0)
2024
DIFM : Dynamic ICAR Spatiotemporal Factor Models (Version 1.0)
2024
DLMtool : Data-Limited Methods Toolkit (Version 6.0.6)
2014
DMCfun : Diffusion Model of Conflict (DMC) in Reaction Time Tasks (Version 4.0.1)
2020
DMQ : Dynamic Multiple Quantile (DMQ) Model (Version 0.1.2)
2023
DNAmotif : DNA Sequence Motifs (Version 0.1.1)
2024
DNAtools : Tools for Analysing Forensic Genetic DNA Data (Version 0.2-4)
2010
DOVE : Durability of Vaccine Efficacy (Version 1.10)
2021
DPP : Inference of Parameters of Normal Distributions from a Mixture of Normals (Version 0.1.2)
2017
DPTM : Dynamic Panel Multiple Threshold Model with Fixed Effects (Version 1.5.0)
2024
DR.SC : Joint Dimension Reduction and Spatial Clustering (Version 3.4)
2021
DRDID : Doubly Robust Difference-in-Differences Estimators (Version 1.2.0)
2020
DSWE : Data Science for Wind Energy (Version 1.8.2)
2021
DTDA.cif : Doubly Truncated Data Analysis, Cumulative Incidence Functions (Version 1.0.2)
2019
DTRKernSmooth : Estimate and Make Inference About Optimal Treatment Regimes via Smoothed Methods (Version 1.1.0)
2023
DatAssim : Data Assimilation (Version 1.0)
2017
DataGraph : Export Data from 'R' to 'DataGraph' (Version 1.2.14)
2017
DataVisualizations : Visualizations of High-Dimensional Data (Version 1.3.2)
2018
DataViz : Data Visualisation Using an HTML Page and 'D3.js' (Version 0.2.8)
2019
DatabionicSwarm : Swarm Intelligence for Self-Organized Clustering (Version 2.0.0)
2017
DeCAFS : Detecting Changes in Autocorrelated and Fluctuating Signals (Version 3.3.3)
2020
DepthProc : Statistical Depth Functions for Multivariate Analysis (Version 2.1.5)
2014
DescTools : Tools for Descriptive Statistics (Version 0.99.58)
2014
Dire : Linear Regressions with a Latent Outcome Variable (Version 2.2.0)
2021
DiscreteDists : Discrete Statistical Distributions (Version 1.0.0)
2024
DiscreteFDR : FDR Based Multiple Testing Procedures with Adaptation for Discrete Tests (Version 2.0.1)
2018
DrImpute : Imputing Dropout Events in Single-Cell RNA-Sequencing Data (Version 1.0)
2017
DriftBurstHypothesis : Calculates the Test-Statistic for the Drift Burst Hypothesis (Version 0.4.0.1)
2019
DstarM : Analyze Two Choice Reaction Time Data with the D*M Method (Version 0.4.0)
2016
DtD : Distance to Default (Version 0.2.2)
2018
DySS : Dynamic Screening Systems (Version 1.0)
2022
DysPIA : Dysregulated Pathway Identification Analysis (Version 1.3)
2020
EAinference : Estimator Augmentation and Simulation-Based Inference (Version 0.2.3)
2017
EBMAforecast : Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms (Version 1.0.32)
2012
EFAfactors : Determining the Number of Factors in Exploratory Factor Analysis (Version 1.1.0)
2024
EFAtools : Fast and Flexible Implementations of Exploratory Factor Analysis Tools (Version 0.4.4)
2020
EMC2 : Bayesian Hierarchical Analysis of Cognitive Models of Choice (Version 2.1.0)
2024
EMMIXgene : A Mixture Model-Based Approach to the Clustering of Microarray Expression Data (Version 0.1.4)
2018
EMbC : Expectation-Maximization Binary Clustering (Version 2.0.4)
2015
EMgaussian : Expectation-Maximization Algorithm for Multivariate Normal (Gaussian) with Missing Data (Version 0.2.1)
2024
ETAS : Modeling Earthquake Data Using 'ETAS' Model (Version 0.6.1.1)
2012
EWGoF : Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions (Version 2.2.2)
2014
Ease : Simulating Explicit Population Genetics Models (Version 0.1.2)
2022
EcoEnsemble : A General Framework for Combining Ecosystem Models (Version 1.1.0)
2022
EigenR : Complex Matrix Algebra with 'Eigen' (Version 1.3.0)
2020
EloChoice : Preference Rating for Visual Stimuli Based on Elo Ratings (Version 0.29.4)
2015
EloRating : Animal Dominance Hierarchies by Elo Rating (Version 0.46.18)
2014
EloSteepness : Bayesian Dominance Hierarchy Steepness via Elo Rating and David's Scores (Version 0.5.0)
2022
EmiR : Evolutionary Minimizer for R (Version 1.0.4)
2021
EmpiricalCalibration : Routines for Performing Empirical Calibration of Observational Study Estimates (Version 3.1.3)
2016
EpiInvert : Variational Techniques in Epidemiology (Version 0.3.1)
2022
EpiLPS : A Fast and Flexible Bayesian Tool for Estimating Epidemiological Parameters (Version 1.3.0)
2021
EpiNow2 : Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters (Version 1.6.1)
2020
EquiTrends : Equivalence Testing for Pre-Trends in Difference-in-Differences Designs (Version 1.0.0)
2024
EstMix : Tumor Clones Percentage Estimations (Version 1.0.1)
2018
EthSEQ : Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data (Version 3.0.2)
2017
Euclimatch : Euclidean Climatch Algorithm (Version 1.0.2)
2023
ExactMultinom : Multinomial Goodness-of-Fit Tests (Version 0.1.2)
2020
ExhaustiveSearch : A Fast and Scalable Exhaustive Feature Selection Framework (Version 1.0.1)
2021
FBCRM : Phase I Optimal Dose Assignment using the FBCRM and MFBCRM Methods (Version 1.1)
2022
FBFsearch : Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors (Version 1.2)
2013
FBMS : Flexible Bayesian Model Selection and Model Averaging (Version 1.0)
2023
FDX : False Discovery Exceedance Controlling Multiple Testing Procedures (Version 2.0.1)
2020
FENmlm : Fixed Effects Nonlinear Maximum Likelihood Models (Version 2.4.4)
2015
FIESTAutils : Utility Functions for Forest Inventory Estimation and Analysis (Version 1.2.3)
2022
FIT : Transcriptomic Dynamics Models in Field Conditions (Version 0.0.6)
2016
FKSUM : Fast Kernel Sums (Version 1.0.1)
2019
FLOPART : Functional Labeled Optimal Partitioning (Version 2024.6.19)
2023
FLORAL : Fit Log-Ratio Lasso Regression for Compositional Data (Version 0.3.0)
2023
FLSSS : Mining Rigs for Problems in the Subset Sum Family (Version 9.1.8)
2014
FMCCSD : Efficient Estimation of Clustered Current Status Data (Version 1.0)
2020
FORTLS : Automatic Processing of Terrestrial-Based Technologies Point Cloud Data for Forestry Purposes (Version 1.4.0)
2021
FRESA.CAD : Feature Selection Algorithms for Computer Aided Diagnosis (Version 3.4.8)
2014
FRESHD : Fast Robust Estimation of Signals in Heterogeneous Data (Version 1.0)
2022
FRK : Fixed Rank Kriging (Version 2.3.1)
2017
FSInteract : Fast Searches for Interactions (Version 0.1.2)
2015
FSSF : Generate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube (Version 0.1.1)
2020
FSelectorRcpp : 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support (Version 0.3.13)
2017
FVDDPpkg : Implement Fleming-Viot-Dependent Dirichlet Processes (Version 0.1.2)
2024
FamilyRank : Algorithm for Ranking Predictors Using Graphical Domain Knowledge (Version 1.0)
2021
FarmTest : Factor-Adjusted Robust Multiple Testing (Version 2.2.0)
2017
FarmSelect : Factor Adjusted Robust Model Selection (Version 1.0.2)
2018
FastBandChol : Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor (Version 0.1.1)
2015
FastGP : Efficiently Using Gaussian Processes with Rcpp and RcppEigen (Version 1.2)
2015
FastGaSP : Fast and Exact Computation of Gaussian Stochastic Process (Version 0.5.3)
2019
FastJM : Semi-Parametric Joint Modeling of Longitudinal and Survival Data (Version 1.4.2)
2022
FastSF : Fast Structural Filtering (Version 0.1.1)
2017
FastUtils : Fast, Readable Utility Functions (Version 0.2.1)
2024
FaultTree : Fault Trees for Risk and Reliability Analysis (Version 1.0.1)
2020
FeatureHashing : Creates a Model Matrix via Feature Hashing with a Formula Interface (Version 0.9.2)
2014
FiRE : Finder of Rare Entities (FiRE) (Version 1.0.1)
2019
FinNet : Quickly Build and Manipulate Financial Networks (Version 0.2.1)
2023
FisPro : Fuzzy Inference System Design and Optimization (Version 1.1.4)
2019
FlexReg : Regression Models for Bounded Continuous and Discrete Responses (Version 1.3.0)
2020
FlexVarJM : Estimate Joint Models with Subject-Specific Variance (Version 0.1.0)
2023
FlyingR : Simulation of Bird Flight Range (Version 0.2.2)
2020
FunChisq : Model-Free Functional Chi-Squared and Exact Tests (Version 2.5.4)
2014
FuncDiv : Compute Contributional Diversity Metrics (Version 1.0.0)
2023
GA : Genetic Algorithms (Version 3.2.4)
2012
GADAG : A Genetic Algorithm for Learning Directed Acyclic Graphs (Version 0.99.0)
2017
GAGAs : Global Adaptive Generative Adjustment Algorithm for Generalized Linear Models (Version 0.6.2)
2022
GAS : Generalized Autoregressive Score Models (Version 0.3.4.1)
2016
GBJ : Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies (Version 0.5.4)
2017
GCPBayes : Bayesian Meta-Analysis of Pleiotropic Effects Using Group Structure (Version 4.2.0)
2021
GCPM : Generalized Credit Portfolio Model (Version 1.2.2)
2014
GCSM : Implements Generic Composite Similarity Measure (Version 0.1.1)
2020
GDINA : The Generalized DINA Model Framework (Version 2.9.4)
2016
GEEaSPU : Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE) (Version 1.0.2)
2016
GENLIB : Genealogical Data Analysis (Version 1.1.10)
2014
GFDmcv : General Hypothesis Testing Problems for Multivariate Coefficients of Variation (Version 0.1.0)
2023
GFM : Generalized Factor Model (Version 1.2.1)
2022
GGClassification : Gabriel Graph Based Large-Margin Classifiers (Version 0.1)
2020
GGIRread : Wearable Accelerometer Data File Readers (Version 1.0.2)
2022
GGMncv : Gaussian Graphical Models with Nonconvex Regularization (Version 2.1.1)
2020
GLCMTextures : GLCM Textures of Raster Layers (Version 0.4.2)
2022
GLMaSPU : An Adaptive Test on High Dimensional Parameters in Generalized Linear Models (Version 1.0)
2016
GLMcat : Generalized Linear Models for Categorical Responses (Version 0.2.7)
2020
GMCM : Fast Estimation of Gaussian Mixture Copula Models (Version 1.4)
2014
GMKMcharlie : Unsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints (Version 1.1.5)
2019
GMMAT : Generalized Linear Mixed Model Association Tests (Version 1.4.2)
2023
GPBayes : Tools for Gaussian Process Modeling in Uncertainty Quantification (Version 0.1.0-6)
2021
GPCERF : Gaussian Processes for Estimating Causal Exposure Response Curves (Version 0.2.4)
2022
GPCMlasso : Differential Item Functioning in Generalized Partial Credit Models (Version 0.1-7)
2018
GPFDA : Gaussian Process for Functional Data Analysis (Version 3.1.3)
2013
GPGame : Solving Complex Game Problems using Gaussian Processes (Version 1.2.0)
2017
GPM : Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets (Version 3.0.1)
2018
GPareto : Gaussian Processes for Pareto Front Estimation and Optimization (Version 1.1.8)
2014
GPvam : Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling (Version 3.1-1)
2012
GPvecchia : Scalable Gaussian-Process Approximations (Version 0.1.7)
2019
GSE : Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data (Version 4.2-1)
2013
GUD : Bayesian Modal Regression Based on the GUD Family (Version 1.0.2)
2024
GUILDS : Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure (Version 1.4.6)
2014
GUTS : Fast Calculation of the Likelihood of a Stochastic Survival Model (Version 1.2.5)
2011
GUniFrac : Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis (Version 1.8)
2012
GWASinlps : Non-Local Prior Based Iterative Variable Selection Tool for Genome-Wide Association Studies (Version 2.3)
2017
GWEX : Multi-Site Stochastic Models for Daily Precipitation and Temperature (Version 1.1.3)
2019
GWmodel : Geographically-Weighted Models (Version 2.4-1)
2013
GauPro : Gaussian Process Fitting (Version 0.2.13)
2016
GeDS : Geometrically Designed Spline Regression (Version 0.2.4)
2017
GenEst : Generalized Mortality Estimator (Version 1.4.9)
2018
GeneralizedUmatrix : Credible Visualization for Two-Dimensional Projections of Data (Version 1.2.6)
2017
GeneralizedWendland : Fully Parameterized Generalized Wendland Covariance Function (Version 0.6.0)
2022
GenomeAdmixR : Simulate Admixture of Genomes (Version 2.1.7)
2021
GeoFIS : Spatial Data Processing for Decision Making (Version 1.1.0)
2021
GeoThinneR : Simple Spatial Thinning for Ecological and Spatial Analysis (Version 1.1.0)
2024
GiRaF : Gibbs Random Fields Analysis (Version 1.0.1)
2016
GillespieSSA2 : Gillespie's Stochastic Simulation Algorithm for Impatient People (Version 0.3.0)
2019
GiniDistance : A New Gini Correlation Between Quantitative and Qualitative Variables (Version 0.1.1)
2019
Glarmadillo : Solve the Graphical Lasso Problem with 'Armadillo' (Version 1.1.1)
2023
Gmedian : Geometric Median, k-Medians Clustering and Robust Median PCA (Version 1.2.7)
2016
Gmisc : Descriptive Statistics, Transition Plots, and More (Version 3.0.3)
2015
GofKmt : Khmaladze Martingale Transformation Goodness-of-Fit Test (Version 2.2.0)
2016
GpGp : Fast Gaussian Process Computation Using Vecchia's Approximation (Version 0.5.1)
2018
GreedyEPL : Greedy Expected Posterior Loss (Version 1.2)
2017
GreedyExperimentalDesign : Greedy Experimental Design Construction (Version 1.5.6.1)
2016
GridOnClusters : Cluster-Preserving Multivariate Joint Grid Discretization (Version 0.1.0.1)
2020
GrpString : Patterns and Statistical Differences Between Two Groups of Strings (Version 0.3.2)
2017
GxEScanR : Run GWAS/GWEIS Scans Using Binary Dosage Files (Version 2.0.2)
2020
HACSim : Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment (Version 1.0.6-1)
2019
HBV.IANIGLA : Modular Hydrological Model (Version 0.2.6)
2019
HDJM : Penalized High-Dimensional Joint Model (Version 0.1.0)
2023
HDLSSkST : Distribution-Free Exact High Dimensional Low Sample Size k-Sample Tests (Version 2.1.0)
2020
HDMAADMM : ADMM for High-Dimensional Mediation Models (Version 0.0.1)
2023
HDNRA : High-Dimensional Location Testing with Normal-Reference Approaches (Version 2.0.1)
2024
HDSpatialScan : Multivariate and Functional Spatial Scan Statistics (Version 1.0.4)
2021
HDTSA : High Dimensional Time Series Analysis Tools (Version 1.0.4)
2021
HDclust : Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks (Version 1.0.4)
2018
HMB : Hierarchical Model-Based Estimation Approach (Version 1.1)
2018
HLMdiag : Diagnostic Tools for Hierarchical (Multilevel) Linear Models (Version 0.5.0)
2011
HMMEsolver : A Fast Solver for Henderson Mixed Model Equation via Row Operations (Version 0.1.2)
2017
HMMmlselect : Determine the Number of States in Hidden Markov Models via Marginal Likelihood (Version 0.1.6)
2019
HTLR : Bayesian Logistic Regression with Heavy-Tailed Priors (Version 0.4-4)
2019
HTT : Hypothesis Testing Tree (Version 0.1.2)
2022
HUM : Compute HUM Value and Visualize ROC Curves (Version 2.0)
2014
HardyWeinberg : Statistical Tests and Graphics for Hardy-Weinberg Equilibrium (Version 1.7.8)
2007
HiGarrote : Nonnegative Garrote Method Incorporating Hierarchical Relationships (Version 1.0)
0
HistDAWass : Histogram-Valued Data Analysis (Version 1.0.8)
2015
HypergeoMat : Hypergeometric Function of a Matrix Argument (Version 4.0.3)
2019
IAPWS95 : Thermophysical Properties of Water and Steam (Version 1.2.4)
2016
IBMPopSim : Individual Based Model Population Simulation (Version 1.1.0)
2020
ICAOD : Optimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA) (Version 1.0.1)
2016
ICRanks : Simultaneous Confidence Intervals for Ranks (Version 3.1)
2017
ICSKAT : Interval-Censored Sequence Kernel Association Test (Version 0.2.0)
2021
ICcalib : Cox Model with Interval-Censored Starting Time of a Covariate (Version 1.0.8)
2018
ICtest : Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction (Version 0.3-5)
2016
ICvectorfields : Vector Fields from Spatial Time Series of Population Abundance (Version 0.1.2)
2021
IFC : Tools for Imaging Flow Cytometry (Version 0.2.1)
2020
IHSEP : Inhomogeneous Self-Exciting Process (Version 0.3.1)
2016
ILSE : Linear Regression Based on 'ILSE' for Missing Data (Version 1.1.7)
2022
IOHexperimenter : Benchmarking Part of the 'IOHprofiler' (Version 0.1.4)
2020
IOHanalyzer : Data Analysis Part of 'IOHprofiler' (Version 0.1.8.10)
2019
IRon : Solving Imbalanced Regression Tasks (Version 0.1.4)
2022
ISOpureR : Deconvolution of Tumour Profiles (Version 1.1.3)
2014
Immigrate : Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection (Version 0.2.1)
2018
ImpactEffectsize : Calculation and Visualization of the Impact Effect Size Measure (Version 0.7)
2019
IncDTW : Incremental Calculation of Dynamic Time Warping (Version 1.1.4.4)
2017
InteRD : The Integrated and Robust Deconvolution (Version 0.1.1)
2022
IntegratedMRF : Integrated Prediction using Uni-Variate and Multivariate Random Forests (Version 1.1.9)
2016
IntervalSurgeon : Operating on Integer-Bounded Intervals (Version 1.3)
2018
IrishDirectorates : A Dynamic Bipartite Latent Space Model to Analyse Irish Companies' Boards from 2003 to 2013 (Version 1.4)
2016
IsingSampler : Sampling Methods and Distribution Functions for the Ising Model (Version 0.2.3)
2014
IsoSpecR : The IsoSpec Algorithm (Version 2.1.3)
2016
JANE : Just Another Latent Space Network Clustering Algorithm (Version 0.1.1)
0
JFM : Rock Mass Structural Analysis from 3D Mesh of Point Cloud (Version 1.0)
2022
JMH : Joint Model of Heterogeneous Repeated Measures and Survival Data (Version 1.0.3)
2023
JMI : Jackknife Mutual Information (Version 0.1.0)
2018
JMbayes : Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach (Version 0.8-85)
2012
JMbayes2 : Extended Joint Models for Longitudinal and Time-to-Event Data (Version 0.5-0)
2021
JOUSBoost : Implements Under/Oversampling for Probability Estimation (Version 2.1.0)
2016
JSM : Semiparametric Joint Modeling of Survival and Longitudinal Data (Version 1.0.1)
2016
JUMP : Replicability Analysis of High-Throughput Experiments (Version 1.0.1)
2023
JacobiEigen : Classical Jacobi Eigenvalue Algorithm (Version 0.3-4)
2015
JuliaCall : Seamless Integration Between R and 'Julia' (Version 0.17.5)
2017
KODAMA : Knowledge Discovery by Accuracy Maximization (Version 2.4.1)
2014
KONPsurv : KONP Tests: Powerful K-Sample Tests for Right-Censored Data (Version 1.0.4)
2019
KSgeneral : Computing P-Values of the One-Sample K-S Test and the Two-Sample K-S and Kuiper Tests for (Dis)Continuous Null Distribution (Version 2.0.2)
2018
KernSmoothIRT : Nonparametric Item Response Theory (Version 6.4)
2011
KernelKnn : Kernel k Nearest Neighbors (Version 1.1.5)
2016
Keyboard : Bayesian Designs for Early Phase Clinical Trials (Version 0.1.3)
2020
KeyboardSimulator : Keyboard and Mouse Input Simulation for Windows OS (Version 2.6.2)
2018
KoulMde : Koul's Minimum Distance Estimation in Regression and Image Segmentation Problems (Version 3.2.1)
2015
L0Learn : Fast Algorithms for Best Subset Selection (Version 2.1.0)
2018
L1centrality : Graph/Network Analysis Based on L1 Centrality (Version 0.3.0)
2023
LA : Lioness Algorithm (LA) (Version 2.3)
2021
LAM : Some Latent Variable Models (Version 0.7-22)
2017
LARisk : Estimation of Lifetime Attributable Risk of Cancer from Radiation Exposure (Version 1.0.0)
2019
LBSPR : Length-Based Spawning Potential Ratio (Version 0.1.6)
2016
LDAandLDAS : Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS) (Version 1.1.3)
2022
LMMELSM : Fit Latent Multivariate Mixed Effects Location Scale Models (Version 0.2.0)
2021
LMMsolver : Linear Mixed Model Solver (Version 1.0.8)
2021
LMN : Inference for Linear Models with Nuisance Parameters (Version 1.1.3)
2022
LOMAR : Localization Microscopy Data Analysis (Version 0.5.0)
2021
LOPART : Labeled Optimal Partitioning (Version 2024.6.19)
2020
LTFHPlus : Implementation of LT-FH++ (Version 2.1.1)
2024
LaF : Fast Access to Large ASCII Files (Version 0.8.4)
2011
LaMa : Fast Numerical Maximum Likelihood Estimation for Latent Markov Models (Version 1.0.0)
2024
LambertW : Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data (Version 0.6.9-1)
2009
Langevin : Langevin Analysis in One and Two Dimensions (Version 1.3.2)
2015
LassoBacktracking : Modelling Interactions in High-Dimensional Data with Backtracking (Version 1.1)
2016
LassoGEE : High-Dimensional Lasso Generalized Estimating Equations (Version 1.0)
2020
LassoNet : 3CoSE Algorithm (Version 0.8.3)
2020
LeMaRns : Length-Based Multispecies Analysis by Numerical Simulation (Version 0.1.2)
2019
LearnNonparam : R6-Based Flexible Framework for Permutation Tests (Version 1.2.3)
2024
LikertMakeR : Synthesise and Correlate Rating-Scale Data (Version 0.3.0)
2022
Lmoments : L-Moments and Quantile Mixtures (Version 1.3-1)
2005
LocalControl : Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence (Version 1.1.4)
2017
LongMemoryTS : Long Memory Time Series (Version 0.1.0)
2019
LorenzRegression : Lorenz and Penalized Lorenz Regressions (Version 2.1.0)
2023
LowWAFOMNX : Low WAFOM Niederreiter-Xing Sequence (Version 1.1.1)
2017
LowWAFOMSobol : Low WAFOM Sobol Sequence (Version 1.1.1)
2017
Luminescence : Comprehensive Luminescence Dating Data Analysis (Version 0.9.25)
2012
MABOUST : Multi-Armed Bayesian Ordinal Utility-Based Sequential Trial (Version 1.0.1)
2020
MADPop : MHC Allele-Based Differencing Between Populations (Version 1.1.7)
2017
MAGEE : Mixed Model Association Test for GEne-Environment Interaction (Version 1.4.2)
2023
MAINT.Data : Model and Analyse Interval Data (Version 2.7.1)
2011
MAPITR : MArginal ePIstasis Test for Regions (Version 1.1.2)
2020
MAT : Multidimensional Adaptive Testing (Version 2.3.2)
2011
MAVE : Methods for Dimension Reduction (Version 1.3.11)
2017
MAZE : Mediation Analysis for Zero-Inflated Mediators (Version 0.0.2)
2023
MCARtest : Optimal Nonparametric Testing of Missing Completely at Random (Version 1.2.2)
2022
MCMCprecision : Precision of Discrete Parameters in Transdimensional MCMC (Version 0.4.0)
2017
MCPModPack : Simulation-Based Design and Analysis of Dose-Finding Trials (Version 0.5)
2020
MDDC : Modified Detecting Deviating Cells Algorithm in Pharmacovigilance (Version 1.0.0)
2024
MDEI : Implementing the Method of Direct Estimation and Inference (Version 1.0)
2023
MEGENA : Multiscale Clustering of Geometrical Network (Version 1.3.7)
2016
MESS : Miscellaneous Esoteric Statistical Scripts (Version 0.5.12)
2012
MGDrivE : Mosquito Gene Drive Explorer (Version 1.6.0)
2019
MGMM : Missingness Aware Gaussian Mixture Models (Version 1.0.1.1)
2020
MHD : Metric Halfspace Depth (Version 0.1.2)
2023
MIRES : Measurement Invariance Assessment Using Random Effects Models and Shrinkage (Version 0.1.0)
2021
MLModelSelection : Model Selection in Multivariate Longitudinal Data Analysis (Version 1.0)
2020
MM4LMM : Inference of Linear Mixed Models Through MM Algorithm (Version 3.0.3)
2018
MMGFM : Multi-Study Multi-Modality Generalized Factor Model (Version 1.1.0)
2024
MMVBVS : Missing Multivariate Bayesian Variable Selection (Version 0.8.0)
2019
MNARclust : Clustering Data with Non-Ignorable Missingness using Semi-Parametric Mixture Models (Version 1.1.0)
2021
MPBoost : Treatment Allocation in Clinical Trials by the Maximal Procedure (Version 0.1-6)
2019
MPCR : Multi- And Mixed-Precision Computations (Version 1.1.3)
2024
MPTinR : Analyze Multinomial Processing Tree Models (Version 1.14.1)
2011
MR.RGM : Multivariate Bidirectional Mendelian Randomization Networks (Version 0.0.3)
2024
MRS : Multi-Resolution Scanning for Cross-Sample Differences (Version 1.2.6)
2015
MSCquartets : Analyzing Gene Tree Quartets under the Multi-Species Coalescent (Version 3.0)
2019
MSEtool : Management Strategy Evaluation Toolkit (Version 3.7.2)
2018
MSGARCH : Markov-Switching GARCH Models (Version 2.51)
2016
MSIMST : Bayesian Monotonic Single-Index Regression Model with the Skew-T Likelihood (Version 1.1)
2024
MSTest : Hypothesis Testing for Markov Switching Models (Version 0.1.3)
2022
MSinference : Multiscale Inference for Nonparametric Time Trend(s) (Version 0.2.1)
2023
MSmix : Finite Mixtures of Mallows Models with Spearman Distance for Full and Partial Rankings (Version 1.0.2)
2024
MTLR : Survival Prediction with Multi-Task Logistic Regression (Version 0.2.1)
2018
MTS : All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models (Version 1.2.1)
2014
MagmaClustR : Clustering and Prediction using Multi-Task Gaussian Processes with Common Mean (Version 1.2.1)
2022
ManifoldOptim : An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization (Version 1.0.1)
2016
MarZIC : Marginal Mediation Effects with Zero-Inflated Compositional Mediator (Version 1.0.0)
2023
MatchIt : Nonparametric Preprocessing for Parametric Causal Inference (Version 4.5.5)
2005
MatrixCorrelation : Matrix Correlation Coefficients (Version 0.10.0)
2016
MatrixExtra : Extra Methods for Sparse Matrices (Version 0.1.15)
2021
MatrixLDA : Penalized Matrix-Normal Linear Discriminant Analysis (Version 0.2)
2016
MazamaRollUtils : Efficient Rolling Functions (Version 0.1.3)
2021
MediaK : Calculate MeDiA_K Distance (Version 1.0)
2015
MedianaDesigner : Power and Sample Size Calculations for Clinical Trials (Version 0.13)
2021
MendelianRandomization : Mendelian Randomization Package (Version 0.10.0)
2016
MetaHD : A Multivariate Meta-Analysis Model for High-Dimensional Metabolomics Data (Version 0.1.3)
2024
MetaStan : Bayesian Meta-Analysis via 'Stan' (Version 1.0.0)
2018
MetricGraph : Random Fields on Metric Graphs (Version 1.3.0)
2023
Mhorseshoe : Approximate Algorithm for Horseshoe Prior (Version 0.1.3)
2023
MiSPU : Microbiome Based Sum of Powered Score (MiSPU) Tests (Version 1.0)
2016
MissCP : Change Point Detection with Missing Values (Version 0.1.0)
2023
MixLFA : Mixture of Longitudinal Factor Analysis Methods (Version 1.0.0)
2024
MixMatrix : Classification with Matrix Variate Normal and t Distributions (Version 0.2.8)
2019
ModelMetrics : Rapid Calculation of Model Metrics (Version 1.2.2.2)
2016
MomTrunc : Moments of Folded and Doubly Truncated Multivariate Distributions (Version 6.1)
2018
Morpho : Calculations and Visualisations Related to Geometric Morphometrics (Version 2.12)
2013
MuChPoint : Multiple Change Point (Version 0.6.3)
2018
MultOrdRS : Model Multivariate Ordinal Responses Including Response Styles (Version 0.1-3)
2021
MultSurvTests : Permutation Tests for Multivariate Survival Analysis (Version 0.2)
2021
MultiBD : Multivariate Birth-Death Processes (Version 0.2.0)
2016
MultiCOAP : High-Dimensional Covariate-Augmented Overdispersed Multi-Study Poisson Factor Model (Version 1.1)
2024
MultiFit : Multiscale Fisher's Independence Test for Multivariate Dependence (Version 1.1.1)
2018
MultiscaleDTM : Multi-Scale Geomorphometric Terrain Attributes (Version 0.8.3)
2022
MultivariateRandomForest : Models Multivariate Cases Using Random Forests (Version 1.1.5)
2016
N2R : Fast and Scalable Approximate k-Nearest Neighbor Search Methods using 'N2' Library (Version 1.0.3)
2020
NAIR : Network Analysis of Immune Repertoire (Version 1.0.4)
2023
NAM : Nested Association Mapping (Version 1.7.3)
2015
NCutYX : Clustering of Omics Data of Multiple Types with a Multilayer Network Representation (Version 0.1.0)
2018
NNS : Nonlinear Nonparametric Statistics (Version 10.9.3)
2016
NPBayesImputeCat : Non-Parametric Bayesian Multiple Imputation for Categorical Data (Version 0.5)
2018
NPCirc : Nonparametric Circular Methods (Version 3.1.1)
2013
NPflow : Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data (Version 0.13.5)
2016
NUSS : Mixed N-Grams and Unigram Sequence Segmentation (Version 0.1.0)
2024
NestMRMC : Single Reader Between-Cases AUC Estimator in Nested Data (Version 1.0)
2022
NestedCategBayesImpute : Modeling, Imputing and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations (Version 1.2.1)
2016
NetMix : Dynamic Mixed-Membership Network Regression Model (Version 0.2.0.2)
2019
NetRep : Permutation Testing Network Module Preservation Across Datasets (Version 1.2.7)
2016
NetworkDistance : Distance Measures for Networks (Version 0.3.4)
2017
NetworkInference : Inferring Latent Diffusion Networks (Version 1.2.4)
2017
NlinTS : Models for Non Linear Causality Detection in Time Series (Version 1.4.5)
2018
Numero : Statistical Framework to Define Subgroups in Complex Datasets (Version 1.9.8)
2017
OCNet : Optimal Channel Networks (Version 1.2.2)
2019
ODRF : Oblique Decision Random Forest for Classification and Regression (Version 0.0.4)
2023
OPSR : Ordinal Probit Switching Regression (Version 0.1.2)
2024
OSFD : Output Space-Filling Design (Version 1.0)
2023
OTclust : Mean Partition, Uncertainty Assessment, Cluster Validation and Visualization Selection for Cluster Analysis (Version 1.0.6)
2019
OncoBayes2 : Bayesian Logistic Regression for Oncology Dose-Escalation Trials (Version 0.8-9)
2019
OpenImageR : An Image Processing Toolkit (Version 1.3.0)
2016
OpenMx : Extended Structural Equation Modelling (Version 2.21.13)
2015
Opt5PL : Optimal Designs for the 5-Parameter Logistic Model (Version 0.1.1)
2018
OptCirClust : Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible (Version 0.0.4)
2020
Orcs : Omnidirectional R Code Snippets (Version 1.2.3)
2018
OwenQ : Owen Q-Function (Version 1.0.7)
2019
PAC : Partition-Assisted Clustering and Multiple Alignments of Networks (Version 1.1.4)
2016
PAFit : Generative Mechanism Estimation in Temporal Complex Networks (Version 1.2.10)
2015
PAGFL : Joint Estimation of Latent Groups and Group-Specific Coefficients in Panel Data Models (Version 1.1.2)
2024
PCMBaseCpp : Fast Likelihood Calculation for Phylogenetic Comparative Models (Version 0.1.9)
2019
PCMRS : Model Response Styles in Partial Credit Models (Version 0.1-4)
2017
PCObw : Bandwidth Selector with Penalized Comparison to Overfitting Criterion (Version 0.0.1)
2022
PEPBVS : Bayesian Variable Selection using Power-Expected-Posterior Prior (Version 2.0)
2023
PFIM : Population Fisher Information Matrix (Version 6.1)
2022
PHSMM : Penalised Maximum Likelihood Estimation for Hidden Semi-Markov Models (Version 1.0)
2021
PINSPlus : Clustering Algorithm for Data Integration and Disease Subtyping (Version 2.0.7)
2018
PJFM : Variational Inference for High-Dimensional Joint Frailty Model (Version 0.1.0)
2024
PKPDsim : Tools for Performing Pharmacokinetic-Pharmacodynamic Simulations (Version 1.4.0)
2022
PLFD : Portmanteau Local Feature Discrimination for Matrix-Variate Data (Version 0.2.0)
2021
PLMIX : Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings (Version 2.1.1)
2016
PLNmodels : Poisson Lognormal Models (Version 1.2.0)
2019
PLSiMCpp : Methods for Partial Linear Single Index Model (Version 1.0.4)
2021
POMaSPU : Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU) (Version 1.0.0)
2017
POSetR : Partially Ordered Sets in R (Version 1.1.4)
2021
POUMM : The Phylogenetic Ornstein-Uhlenbeck Mixed Model (Version 2.1.7)
2017
PP : Person Parameter Estimation (Version 0.6.3-11)
2011
PPMR : Probabilistic Two Sample Mendelian Randomization (Version 1.0)
2019
PPRL : Privacy Preserving Record Linkage (Version 0.3.8)
2018
PPSFS : Partial Profile Score Feature Selection in High-Dimensional Generalized Linear Interaction Models (Version 0.1.0)
2022
PPforest : Projection Pursuit Classification Forest (Version 0.1.3)
2017
PPtreeViz : Projection Pursuit Classification Tree Visualization (Version 2.0.4)
2015
PPtreeregViz : Projection Pursuit Regression Tree Visualization (Version 2.0.5)
2022
PQLseq : Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies (Version 1.2.1)
2018
PRDA : Conduct a Prospective or Retrospective Design Analysis (Version 1.0.0)
2020
PRECAST : Embedding and Clustering with Alignment for Spatial Datasets (Version 1.6.5)
2022
PRIMME : Eigenvalues and Singular Values and Vectors from Large Matrices (Version 3.2-6)
2017
PROsetta : Linking Patient-Reported Outcomes Measures (Version 0.4.1)
2020
PReMiuM : Dirichlet Process Bayesian Clustering, Profile Regression (Version 3.2.13)
2013
PSGD : Projected Subset Gradient Descent (Version 1.0.3)
2022
PUlasso : High-Dimensional Variable Selection with Presence-Only Data (Version 3.2.5)
2017
PanelCount : Random Effects and/or Sample Selection Models for Panel Count Data (Version 2.0.1)
2015
PanelMatch : Matching Methods for Causal Inference with Time-Series Cross-Sectional Data (Version 2.2.0)
2020
PartialNetwork : Estimating Peer Effects Using Partial Network Data (Version 1.0.4)
2023
PenCoxFrail : Regularization in Cox Frailty Models (Version 2.0.0)
2016
Peptides : Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences (Version 2.4.6)
2014
Phase123 : Simulating and Conducting Phase 123 Trials (Version 2.1)
2018
Phase12Compare : Simulates SPSO and Efftox Phase 12 Trials with Correlated Outcomes (Version 1.5)
2019
PheVis : Automatic Phenotyping of Electronic Health Record at Visit Resolution (Version 1.0.4)
2021
PhenotypeSimulator : Flexible Phenotype Simulation from Different Genetic and Noise Models (Version 0.3.4)
2017
PhylogeneticEM : Automatic Shift Detection using a Phylogenetic EM (Version 1.7.0)
2017
PieceExpIntensity : Bayesian Model to Find Changepoints Based on Rates and Count Data (Version 1.0.4)
2017
Pijavski : Global Univariate Minimization (Version 1.0.3)
2016
PoDBAY : Vaccine Efficacy Estimation Package (Version 1.4.3)
2021
PoissonBinomial : Efficient Computation of Ordinary and Generalized Poisson Binomial Distributions (Version 1.2.7)
2020
PoissonMultinomial : The Poisson-Multinomial Distribution (Version 1.1)
2022
PolynomF : Polynomials in R (Version 2.0-8)
2008
PoolTestR : Prevalence and Regression for Pool-Tested (Group-Tested) Data (Version 0.1.3)
2021
PopED : Population (and Individual) Optimal Experimental Design (Version 0.7.0)
2014
PracTools : Designing and Weighting Survey Samples (Version 1.5)
2013
ProFAST : Probabilistic Factor Analysis for Spatially-Aware Dimension Reduction (Version 1.4)
2023
ProbBreed : Probability Theory for Selecting Candidates in Plant Breeding (Version 1.0.4.3)
2023
ProbitSpatial : Probit with Spatial Dependence, SAR, SEM and SARAR Models (Version 1.1)
2016
ProcData : Process Data Analysis (Version 0.3.2)
2020
ProjectionBasedClustering : Projection Based Clustering (Version 1.2.2)
2017
QF : Density, Cumulative and Quantile Functions of Quadratic Forms (Version 0.0.6)
2020
QRM : Provides R-Language Code to Examine Quantitative Risk Management Concepts (Version 0.4-31)
2012
QTL.gCIMapping.GUI : QTL Genome-Wide Composite Interval Mapping with Graphical User Interface (Version 2.1.1)
2018
QTL.gCIMapping : QTL Genome-Wide Composite Interval Mapping (Version 3.4)
2018
QWDAP : Quantum Walk-Based Data Analysis and Prediction (Version 1.1.20)
2021
Qtools : Utilities for Quantiles (Version 1.5.9)
2016
QuadratiK : Collection of Methods Constructed using Kernel-Based Quadratic Distances (Version 1.1.2)
2024
QuantRegGLasso : Adaptively Weighted Group Lasso for Semiparametric Quantile Regression Models (Version 1.0.0)
2024
Quartet : Comparison of Phylogenetic Trees Using Quartet and Split Measures (Version 1.2.7)
2019
R2sample : Various Methods for the Two Sample Problem (Version 2.2.0)
2022
RAINBOWR : Genome-Wide Association Study with SNP-Set Methods (Version 0.1.35)
2019
RBesT : R Bayesian Evidence Synthesis Tools (Version 1.7-3)
2017
RCDT : Fast 2D Constrained Delaunay Triangulation (Version 1.3.0)
2022
RCSF : Airborne LiDAR Filtering Method Based on Cloth Simulation (Version 1.0.2)
2018
RClickhouse : 'Yandex Clickhouse' Interface for R with Basic 'dplyr' Support (Version 0.6.9)
2017
RDM : Quantify Dependence using Rearranged Dependence Measures (Version 0.1.1)
2023
RDP : The Ramer-Douglas-Peucker Algorithm (Version 0.3.0)
2021
RDSsamplesize : RDS Sample Size Estimation and Power Calculation (Version 0.5.0)
2022
REddyProc : Post Processing of (Half-)Hourly Eddy-Covariance Measurements (Version 1.3.3)
2018
REndo : Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables (Version 2.4.10)
2015
RGMM : Robust Mixture Model (Version 2.1.0)
2022
RGeode : Geometric Density Estimation (Version 0.1.0)
2017
RI2by2 : Randomization Inference for Treatment Effects on a Binary Outcome (Version 1.4)
2014
RITCH : R Parser for the ITCH-Protocol (Version 0.1.26)
2023
RInside : C++ Classes to Embed R in C++ (and C) Applications (Version 0.2.18)
2009
RJafroc : Artificial Intelligence Systems and Observer Performance (Version 2.1.2)
2015
RJcluster : A Fast Clustering Algorithm for High Dimensional Data Based on the Gram Matrix Decomposition (Version 3.2.4)
2020
RKHSMetaMod : Ridge Group Sparse Optimization Problem for Estimation of a Meta Model Based on Reproducing Kernel Hilbert Spaces (Version 1.1)
2019
RLRsim : Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models (Version 3.1-8)
2007
RLumCarlo : Monte-Carlo Methods for Simulating Luminescence Phenomena (Version 0.1.9)
2020
RLumModel : Solving Ordinary Differential Equations to Understand Luminescence (Version 0.2.10)
2016
RMCC : Airborne LiDAR Filtering Method Based on Multiscale Curvature (Version 0.1.1)
2022
RMM : Revenue Management Modeling (Version 0.1.0)
2022
RMPSH : Recursive Modified Pattern Search on Hyper-Rectangle (Version 1.1.1)
2020
RMSNumpress : 'Rcpp' Bindings to Native C++ Implementation of MS Numpress (Version 1.0.1)
2020
RMSS : Robust Multi-Model Subset Selection (Version 1.1.1)
2023
RMixtCompIO : Minimal Interface of the C++ 'MixtComp' Library for Mixture Models with Heterogeneous and (Partially) Missing Data (Version 4.0.11)
2019
RNOmni : Rank Normal Transformation Omnibus Test (Version 1.0.1.2)
2017
RNewsflow : Tools for Comparing Text Messages Across Time and Media (Version 1.2.8)
2016
RNifti : Fast R and C++ Access to NIfTI Images (Version 1.7.0)
2016
RNiftyReg : Image Registration Using the 'NiftyReg' Library (Version 2.8.4)
2010
ROI.plugin.qpoases : 'qpOASES' Plugin for the 'R' Optimization Infrastructure (Version 1.0-3)
2018
ROptSpace : Matrix Reconstruction from a Few Entries (Version 0.2.3)
2017
RPEGLMEN : Gamma and Exponential Generalized Linear Models with Elastic Net Penalty (Version 1.1.2)
2019
RPatternJoin : String Similarity Joins for Hamming and Levenshtein Distances (Version 1.0.0)
2024
RPhosFate : Soil and Chemical Substance Emission and Transport Model (Version 1.0.4)
2022
RProtoBuf : R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3) (Version 0.4.22)
2010
RPtests : Goodness of Fit Tests for High-Dimensional Linear Regression Models (Version 0.1.5)
2016
RQuantLib : R Interface to the 'QuantLib' Library (Version 0.4.24)
2002
RRI : Residual Randomization Inference for Regression Models (Version 1.1)
2019
RSNNS : Neural Networks using the Stuttgart Neural Network Simulator (SNNS) (Version 0.4-17)
2010
RSSL : Implementations of Semi-Supervised Learning Approaches for Classification (Version 0.9.7)
2016
RScelestial : Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference (Version 1.0.4)
2019
RSpectra : Solvers for Large-Scale Eigenvalue and SVD Problems (Version 0.16-2)
2016
RStoolbox : Remote Sensing Data Analysis (Version 1.0.0)
2015
RTCC : Detecting Trait Clustering in Environmental Gradients (Version 0.1.1)
2020
RTL : Risk Tool Library - Trading, Risk, 'Analytics' for Commodities (Version 1.3.5)
2020
RTMB : 'R' Bindings for 'TMB' (Version 1.6)
2023
RTSA : 'Trial Sequential Analysis' for Error Control and Inference in Sequential Meta-Analyses (Version 0.2.2)
2023
RTransferEntropy : Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy (Version 0.2.21)
2018
RVCompare : Compare Real Valued Random Variables (Version 0.1.8)
2021
RWDataPlyr : Read and Manipulate Data from 'RiverWare' (Version 0.6.4)
2018
RWNN : Random Weight Neural Networks (Version 0.4)
2024
RZigZag : Zig-Zag Sampler (Version 0.2.1)
2017
Racmacs : Antigenic Cartography Macros (Version 1.2.9)
2023
RaceID : Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data (Version 0.3.8)
2018
RadEro : Cs-137 Conversion Model (Version 1.0.4)
2024
Radviz : Project Multidimensional Data in 2D Space (Version 0.9.3)
2016
Rankcluster : Model-Based Clustering for Multivariate Partial Ranking Data (Version 0.98.0)
2013
Rapi : Interface for Multiple Data Providers 'EDDS' and 'FRED' (Version 1.0.5)
2024
RationalMatrix : Exact Matrix Algebra for Rational Matrices (Version 1.0.0)
2023
Ravages : Rare Variant Analysis and Genetic Simulations (Version 1.1.3)
2020
RavenR : Raven Hydrological Modelling Framework R Support and Analysis (Version 2.2.2)
2020
Rblpapi : R Interface to 'Bloomberg' (Version 0.3.15)
2015
Rborist : Extensible, Parallelizable Implementation of the Random Forest Algorithm (Version 0.3-7)
2015
Rcatch22 : Calculation of 22 Canonical Time-Series Characteristics (Version 0.2.3)
2021
Rcereal : "Cereal Headers for R and C++ Serialization" (Version 1.3.2)
2015
RcppAPT : 'Rcpp' Interface to the APT Package Manager (Version 0.0.9)
2015
RcppAnnoy : 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors (Version 0.0.22)
2014
RcppArmadillo : 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library (Version 14.0.2-1)
2010
RcppArray : 'Rcpp' Meets 'C++' Arrays (Version 0.3.0)
2023
RcppBDT : 'Rcpp' Bindings for the Boost Date_Time Library (Version 0.2.6)
2011
RcppBessel : Bessel Functions Rcpp Interface (Version 1.0.0)
2024
RcppBlaze : 'Rcpp' Integration for the 'Blaze' High-Performance 'C++' Math Library (Version 1.0.1)
2017
RcppCCTZ : 'Rcpp' Bindings for the 'CCTZ' Library (Version 0.2.12)
2015
RcppCGAL : 'Rcpp' Integration for 'CGAL' (Version 5.6.4)
2021
RcppCNPy : Read-Write Support for 'NumPy' Files via 'Rcpp' (Version 0.2.13)
2012
RcppCWB : 'Rcpp' Bindings for the 'Corpus Workbench' ('CWB') (Version 0.6.5)
2018
RcppCensSpatial : Spatial Estimation and Prediction for Censored/Missing Responses (Version 0.3.0)
2021
RcppClassic : Deprecated 'classic' 'Rcpp' 'API' (Version 0.9.13)
2010
RcppClassicExamples : Examples using 'RcppClassic' to Interface R and C++ (Version 0.1.3)
2012
RcppClock : Seamless 'Rcpp' Benchmarking (Version 1.1)
2021
RcppColors : Color Mappings and 'C++' Header Files for Color Conversion (Version 0.6.0)
2022
RcppDE : Global Optimization by Differential Evolution in C++ (Version 0.1.7)
2010
RcppDate : 'date' C++ Header Library for Date and Time Functionality (Version 0.0.4)
2020
RcppDist : 'Rcpp' Integration of Additional Probability Distributions (Version 0.1.1)
2018
RcppDynProg : 'Rcpp' Dynamic Programming (Version 0.2.1)
2019
RcppEigen : 'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library (Version 0.3.4.0.2)
2011
RcppEnsmallen : Header-Only C++ Mathematical Optimization Library for 'Armadillo' (Version 0.2.21.1.1)
2018
RcppExamples : Examples using 'Rcpp' to Interface R and C++ (Version 0.1.9)
2010
RcppFarmHash : Interface to the Google 'FarmHash' Family of Hash Functions (Version 0.0.3)
2021
RcppFastAD : 'Rcpp' Bindings to 'FastAD' Auto-Differentiation (Version 0.0.4)
2023
RcppFastFloat : 'Rcpp' Bindings for the 'fast_float' Header-Only Library for Number Parsing (Version 0.0.4)
2021
RcppGSL : 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices (Version 0.3.13)
2010
RcppGetconf : 'Rcpp' Interface for Querying System Configuration Variables (Version 0.0.3)
2016
RcppGreedySetCover : Greedy Set Cover (Version 0.1.0)
2018
RcppHMM : Rcpp Hidden Markov Model (Version 1.2.2)
2017
RcppHNSW : 'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors (Version 0.6.0)
2019
RcppHungarian : Solves Minimum Cost Bipartite Matching Problems (Version 0.3)
2019
RcppInt64 : 'Rcpp'-Based Helper Functions to Pass 'Int64' and 'nanotime' Values Between 'R' and 'C++' (Version 0.0.5)
2023
RcppJagger : An R Wrapper for Jagger (Version 0.0.2)
2023
RcppLbfgsBlaze : 'L-BFGS' Algorithm Based on 'Blaze' for 'R' and 'Rcpp' (Version 0.1.0)
2024
RcppML : Rcpp Machine Learning Library (Version 0.3.7)
2021
RcppMagicEnum : 'Rcpp' Bindings to 'Magic Enum' 'C++' 'Enum' Support (Version 0.0.1)
2024
RcppMeCab : 'rcpp' Wrapper for 'mecab' Library (Version 0.0.1.2)
2018
RcppMsgPack : 'MsgPack' C++ Header Files and Interface Functions for R (Version 0.2.3)
2017
RcppNLoptExample : 'Rcpp' Package Illustrating Header-Only Access to 'NLopt' (Version 0.0.1)
2018
RcppNumerical : 'Rcpp' Integration for Numerical Computing Libraries (Version 0.6-0)
2016
RcppParallel : Parallel Programming Tools for 'Rcpp' (Version 5.1.9)
2014
RcppQuantuccia : R Bindings to the Calendaring Functionality of 'QuantLib' (Version 0.1.2)
2017
RcppRedis : 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library (Version 0.2.4)
2014
RcppRoll : Efficient Rolling / Windowed Operations (Version 0.3.1)
2013
RcppSMC : Rcpp Bindings for Sequential Monte Carlo (Version 0.2.7)
2012
RcppSimdJson : 'Rcpp' Bindings for the 'simdjson' Header-Only Library for 'JSON' Parsing (Version 0.1.12)
2020
RcppSpdlog : R and C++ Interfaces to 'spdlog' C++ Header Library for Logging (Version 0.0.18)
2020
RcppStreams : 'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing (Version 0.1.3)
2015
RcppTN : Rcpp-Based Truncated Normal Distribution RNG and Family (Version 0.2-2)
2017
RcppTOML : 'Rcpp' Bindings to Parser for "Tom's Obvious Markup Language" (Version 0.2.2)
2015
RcppThread : R-Friendly Threading in C++ (Version 2.1.7)
2017
RcppUUID : Generating Universally Unique Identificators (Version 1.1.1)
2020
RcppXPtrUtils : XPtr Add-Ons for 'Rcpp' (Version 0.1.2)
2017
RcppXsimd : Xsimd C++ Header-Only Library Files (Version 7.1.6)
2019
RcppXts : Interface the 'xts' API via 'Rcpp' (Version 0.0.6)
2013
RcppZiggurat : 'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations (Version 0.1.6)
2013
Rdimtools : Dimension Reduction and Estimation Methods (Version 1.1.2)
2017
ReAD : Powerful Replicability Analysis of Genome-Wide Association Studies (Version 1.0.1)
2023
ReIns : Functions from "Reinsurance: Actuarial and Statistical Aspects" (Version 1.0.14)
2016
RealVAMS : Multivariate VAM Fitting (Version 0.4-6)
2014
RecAssoRules : Recursive Mining for Frequent Pattern and Confident Association Rules (Version 1.0)
2020
Recocrop : Estimating Environmental Suitability for Plants (Version 0.4-1)
2021
RespirAnalyzer : Analysis Functions of Respiratory Data (Version 1.0.2)
2021
RestRserve : A Framework for Building HTTP API (Version 1.2.3)
2020
Rfast : A Collection of Efficient and Extremely Fast R Functions (Version 2.1.0)
2016
Rfast2 : A Collection of Efficient and Extremely Fast R Functions II (Version 0.1.5.2)
2019
Rfmtool : Fuzzy Measure Tools (Version 5.0.4)
2016
Rforestry : Random Forests, Linear Trees, and Gradient Boosting for Inference and Interpretability (Version 0.10.0)
2021
Rfssa : Functional Singular Spectrum Analysis (Version 3.1.0)
2019
Rgof : 1d Goodness of Fit Tests (Version 2.1.1)
2023
RiemBase : Functions and C++ Header Files for Computation on Manifolds (Version 0.2.5)
2018
Riemann : Learning with Data on Riemannian Manifolds (Version 0.1.4)
2020
Rirt : Data Analysis and Parameter Estimation Using Item Response Theory (Version 0.0.2)
2019
Rlabkey : Data Exchange Between R and 'LabKey' Server (Version 3.4.0)
2008
Rlgt : Bayesian Exponential Smoothing Models with Trend Modifications (Version 0.2-2)
2019
Rlibeemd : Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN) (Version 1.4.3)
2015
Rlibkdv : A Versatile Kernel Density Visualization Library for Geospatial Analytics (Heatmap) (Version 1.1)
2023
Rlinsolve : Iterative Solvers for (Sparse) Linear System of Equations (Version 0.3.2)
2017
Rmalschains : Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) (Version 0.2-10)
2012
RmecabKo : An 'Rcpp' Interface for Eunjeon Project (Version 0.1.6.2)
2017
Rmixmod : Classification with Mixture Modelling (Version 2.1.10)
2012
Rmodule : Automated Markov Chain Monte Carlo for Arbitrarily Structured Correlation Matrices (Version 1.0)
2023
Rnanoflann : Extremely Fast Nearest Neighbor Search (Version 0.0.3)
2023
Rnmr1D : Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra (Version 1.3.2)
2018
RoBTT : Robust Bayesian T-Test (Version 1.3.1)
2022
RobGARCHBoot : Robust Bootstrap Forecast Densities for GARCH Models (Version 1.2.0)
2019
RobKF : Innovative and/or Additive Outlier Robust Kalman Filtering (Version 1.0.2)
2020
RobRegression : Robust Multivariate Regression (Version 0.1.0)
2024
RobustCalibration : Robust Calibration of Imperfect Mathematical Models (Version 0.5.5)
2018
RobustGaSP : Robust Gaussian Stochastic Process Emulation (Version 0.6.6)
2016
Ropj : Import Origin(R) Project Files (Version 0.3-5)
2019
RoughSets : Data Analysis Using Rough Set and Fuzzy Rough Set Theories (Version 1.3-8)
2014
Rphylopars : Phylogenetic Comparative Tools for Missing Data and Within-Species Variation (Version 0.3.10)
2015
RprobitB : Bayesian Probit Choice Modeling (Version 1.1.4)
2021
Rquefts : Quantitative Evaluation of the Native Fertility of Tropical Soils (Version 1.2-4)
2019
Rtsne : T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation (Version 0.17)
2014
Rvcg : Manipulations of Triangular Meshes Based on the 'VCGLIB' API (Version 0.24)
2014
Rwofost : WOFOST Crop Growth Simulation Model (Version 0.8-3)
2020
Ryacas : R Interface to the 'Yacas' Computer Algebra System (Version 1.1.5)
2007
Ryacas0 : Legacy 'Ryacas' (Interface to 'Yacas' Computer Algebra System) (Version 0.4.4)
2019
SAGMM : Clustering via Stochastic Approximation and Gaussian Mixture Models (Version 0.2.4)
2019
SAM : Sparse Additive Modelling (Version 1.1.3)
2012
SAMGEP : A Semi-Supervised Method for Prediction of Phenotype Event Times (Version 0.1.0-1)
2021
SANple : Fitting Shared Atoms Nested Models via Markov Chains Monte Carlo (Version 0.1.1)
2023
SANvi : Fitting Shared Atoms Nested Models via Variational Bayes (Version 0.1.1)
2023
SAR : Smart Adaptive Recommendations (Version 1.0.3)
2019
SBCK : Statistical Bias Correction Kit (Version 1.0.0)
2021
SBmedian : Scalable Bayes with Median of Subset Posteriors (Version 0.1.1)
2020
SC.MEB : Spatial Clustering with Hidden Markov Random Field using Empirical Bayes (Version 1.1)
2021
SCCI : Stochastic Complexity-Based Conditional Independence Test for Discrete Data (Version 1.2)
2019
SCIntRuler : Guiding the Integration of Multiple Single-Cell RNA-Seq Datasets (Version 0.99.6)
2024
SCORNET : Semi-Supervised Calibration of Risk with Noisy Event Times (Version 0.1.1)
2020
SDMtune : Species Distribution Model Selection (Version 1.3.1)
2019
SEERaBomb : SEER and Atomic Bomb Survivor Data Analysis Tools (Version 2019.2)
2012
SELF : A Structural Equation Embedded Likelihood Framework for Causal Discovery (Version 0.1.1)
2017
SFS : Similarity-First Search Seriation Algorithm (Version 0.1.4)
2017
SGDinference : Inference with Stochastic Gradient Descent (Version 0.1.0)
2023
SGPR : Sparse Group Penalized Regression for Bi-Level Variable Selection (Version 0.1.2)
2024
SHT : Statistical Hypothesis Testing Toolbox (Version 0.1.8)
2019
SILGGM : Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks (Version 1.0.0)
2017
SIMplyBee : 'AlphaSimR' Extension for Simulating Honeybee Populations and Breeding Programmes (Version 0.4.1)
2022
SIRmcmc : Compartmental Susceptible-Infectious-Recovered (SIR) Model of Community and Household Infection (Version 1.1.1)
2021
SIT : Association Measurement Through Sliced Independence Test (SIT) (Version 0.1.1)
2022
SITH : A Spatial Model of Intra-Tumor Heterogeneity (Version 1.1.0)
2020
SK4FGA : Scott-Knott for Forensic Glass Analysis (Version 0.1.1)
2023
SKFCPD : Fast Online Changepoint Detection for Temporally Correlated Data (Version 0.2.4)
2024
SLOPE : Sorted L1 Penalized Estimation (Version 0.5.1)
2015
SMITIDvisu : Visualize Data for Host and Viral Population from 'SMITIDstruct' using 'HTMLwidgets' (Version 0.0.9)
2019
SMMA : Soft Maximin Estimation for Large Scale Array-Tensor Models (Version 1.0.3)
2017
SMME : Soft Maximin Estimation for Large Scale Heterogeneous Data (Version 1.1.1)
2021
SMR : Externally Studentized Midrange Distribution (Version 2.1.0)
2012
SMUT : Multi-SNP Mediation Intersection-Union Test (Version 1.1)
2018
SNPknock : Knockoffs for Hidden Markov Models and Genetic Data (Version 0.8.2)
2017
SNSeg : Self-Normalization(SN) Based Change-Point Estimation for Time Series (Version 1.0.3)
2023
SPARSEMODr : SPAtial Resolution-SEnsitive Models of Outbreak Dynamics (Version 1.2.0)
2020
SPSP : Selection by Partitioning the Solution Paths (Version 0.2.0)
2021
SPlit : Split a Dataset for Training and Testing (Version 1.2)
2021
SSOSVM : Stream Suitable Online Support Vector Machines (Version 0.2.1)
2019
STAREG : An Empirical Bayes Approach for Replicability Analysis Across Two Studies (Version 1.0.3)
2023
STARTdesign : Single to Double Arm Transition Design for Phase II Clinical Trials (Version 1.0)
2017
STARTS : Functions for the STARTS Model (Version 1.3-8)
2017
SUNGEO : Sub-National Geospatial Data Archive: Geoprocessing Toolkit (Version 1.3.0)
2020
SVDNF : Discrete Nonlinear Filtering for Stochastic Volatility Models (Version 0.1.11)
2022
ScaleSpikeSlab : Scalable Spike-and-Slab (Version 1.0)
2022
Scalelink : Create Scale Linkage Scores (Version 1.0)
2019
ScatterDensity : Density Estimation and Visualization of 2D Scatter Plots (Version 0.0.4)
2023
SensIAT : Sensitivity Analysis for Irregular Assessment Times (Version 0.1.0)
2024
SeqDetect : Sequence and Latent Process Detector (Version 1.0.7)
2020
SeqKat : Detection of Kataegis (Version 0.0.8)
2017
SequenceSpikeSlab : Exact Bayesian Model Selection Methods for the Sparse Normal Sequence Model (Version 1.0.1)
2019
SeqNet : Generate RNA-Seq Data from Gene-Gene Association Networks (Version 1.1.3)
2019
Seurat : Tools for Single Cell Genomics (Version 5.1.0)
2017
SeuratObject : Data Structures for Single Cell Data (Version 5.0.2)
2021
SheetReader : Parse xlsx Files (Version 1.2.1)
2022
ShrinkCovMat : Shrinkage Covariance Matrix Estimators (Version 1.4.0)
2014
SiPhyNetwork : A Phylogenetic Simulator for Reticulate Evolution (Version 1.1.0)
2022
Sieve : Nonparametric Estimation by the Method of Sieves (Version 2.1)
2022
Signac : Analysis of Single-Cell Chromatin Data (Version 1.14.0)
2020
SimBIID : Simulation-Based Inference Methods for Infectious Disease Models (Version 0.2.1)
2019
SimJoint : Simulate Joint Distribution (Version 0.3.12)
2019
SimReg : Similarity Regression (Version 3.4)
2015
SimSurvNMarker : Simulate Survival Time and Markers (Version 0.1.3)
2020
SmartSVA : Fast and Robust Surrogate Variable Analysis (Version 0.1.3)
2016
SobolSequence : Sobol Sequences with Better Two-Dimensional Projections (Version 1.0)
2017
SoftBart : Implements the SoftBart Algorithm (Version 1.0.1)
2022
SoyNAM : Soybean Nested Association Mapping Dataset (Version 1.6.2)
2015
SpaCCI : Spatially Aware Cell-Cell Interaction Analysis (Version 1.0.2)
2024
SpaCOAP : High-Dimensional Spatial Covariate-Augmented Overdispersed Poisson Factor Model (Version 1.2)
2024
SpaDES.tools : Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models (Version 2.0.7)
2017
SpaTopic : Topic Inference to Identify Tissue Architecture in Multiplexed Images (Version 1.1.0)
2024
SpaceTimeBSS : Blind Source Separation for Multivariate Spatio-Temporal Data (Version 0.4-0)
2022
SparseChol : Sparse Matrix C++ Classes Including Sparse Cholesky LDL Decomposition of Symmetric Matrices (Version 0.3.1)
2022
SparseLPM : The Sparse Latent Position Model for Nonnegative Interaction Data (Version 1.0)
2018
SpatMCA : Regularized Spatial Maximum Covariance Analysis (Version 1.0.4)
2016
SpatPCA : Regularized Principal Component Analysis for Spatial Data (Version 1.3.5)
2015
SpatialBSS : Blind Source Separation for Multivariate Spatial Data (Version 0.14-0)
2020
SpatialEpi : Methods and Data for Spatial Epidemiology (Version 1.2.8)
2012
SpatialKWD : Spatial KWD for Large Spatial Maps (Version 0.4.1)
2021
SpatialTools : Tools for Spatial Data Analysis (Version 1.0.5)
2011
Spbsampling : Spatially Balanced Sampling (Version 1.3.5)
2018
SpecsVerification : Forecast Verification Routines for Ensemble Forecasts of Weather and Climate (Version 0.5-3)
2014
SplitGLM : Split Generalized Linear Models (Version 1.0.5)
2021
SplitReg : Split Regularized Regression (Version 1.0.2)
2019
Sshaped : Nonparametric, Tuning-Free Estimation of S-Shaped Functions (Version 1.1)
2021
StMoSim : Quantile-Quantile Plot with Several Gaussian Simulations (Version 3.1.1)
2010
StanHeaders : C++ Header Files for Stan (Version 2.32.10)
2015
StanMoMo : Bayesian Mortality Modelling with 'Stan' (Version 1.2.0)
2021
StempCens : Spatio-Temporal Estimation and Prediction for Censored/Missing Responses (Version 1.1.0)
2019
StepSignalMargiLike : Step-Wise Signal Extraction via Marginal Likelihood (Version 2.6.0)
2017
StepwiseTest : Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion (Version 1.0)
2016
StereoMorph : Stereo Camera Calibration and Reconstruction (Version 1.6.7)
2014
StochBlock : Stochastic Blockmodeling of One-Mode and Linked Networks (Version 0.1.2)
2023
StuteTest : Stute (1997) Linearity Test (Version 1.0.2)
2024
SubTite : Subgroup Specific Optimal Dose Assignment (Version 4.0.5)
2017
SuperGauss : Superfast Likelihood Inference for Stationary Gaussian Time Series (Version 2.0.3)
2017
SuperRanker : Sequential Rank Agreement (Version 1.2.1)
2016
SuperpixelImageSegmentation : Superpixel Image Segmentation (Version 1.0.5)
2018
SurrogateBMA : Flexible Evaluation of Surrogate Markers with Bayesian Model Averaging (Version 1.0)
2024
SurrogateRegression : Surrogate Outcome Regression Analysis (Version 0.6.0.1)
2020
SurvEval : Methods for the Evaluation of Survival Models (Version 1.1)
2024
SurvivalClusteringTree : Clustering Analysis Using Survival Tree and Forest Algorithms (Version 1.1.1)
2023
T4cluster : Tools for Cluster Analysis (Version 0.1.2)
2020
T4transport : Tools for Computational Optimal Transport (Version 0.1.2)
2020
TAG : Transformed Additive Gaussian Processes (Version 0.5.1)
2019
TAM : Test Analysis Modules (Version 4.2-21)
2013
TCHazaRds : Tropical Cyclone (Hurricane, Typhoon) Spatial Hazard Modelling (Version 1.1.2)
2024
TDA : Statistical Tools for Topological Data Analysis (Version 1.9.1)
2021
TDAkit : Toolkit for Topological Data Analysis (Version 0.1.2)
2021
TDAstats : Pipeline for Topological Data Analysis (Version 0.4.1)
2018
TDAvec : Vector Summaries of Persistence Diagrams (Version 0.1.3)
2022
TDApplied : Machine Learning and Inference for Topological Data Analysis (Version 3.0.4)
2022
TESS : Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events (Version 2.1.2)
2012
TFMPvalue : Efficient and Accurate P-Value Computation for Position Weight Matrices (Version 0.0.9)
2014
TFRE : A Tuning-Free Robust and Efficient Approach to High-Dimensional Regression (Version 0.1.0)
2024
TLMoments : Calculate TL-Moments and Convert Them to Distribution Parameters (Version 0.7.5.3)
2017
TMTI : Too Many, Too Improbable (TMTI) Test Procedures (Version 1.0.3)
2021
TSDFGS : Training Set Determination for Genomic Selection (Version 2.0)
2019
TSrepr : Time Series Representations (Version 1.1.0)
2018
TapeS : Tree Taper Curves and Sorting Based on 'TapeR' (Version 0.12.1)
2023
TensorClustering : Model-Based Tensor Clustering (Version 1.0.2)
2021
TestCor : FWER and FDR Controlling Procedures for Multiple Correlation Tests (Version 0.0.2.2)
2019
TestDesign : Optimal Test Design Approach to Fixed and Adaptive Test Construction (Version 1.7.0)
2019
TestsSymmetry : Tests for Symmetry when the Center of Symmetry is Unknown (Version 1.0.0)
2024
TexExamRandomizer : Personalizes and Randomizes Exams Written in 'LaTeX' (Version 1.2.7)
2017
TiPS : Trajectories and Phylogenies Simulator (Version 1.2.3)
2021
TransPhylo : Inference of Transmission Tree from a Dated Phylogeny (Version 1.4.5)
2020
TreeBUGS : Hierarchical Multinomial Processing Tree Modeling (Version 1.5.0)
2016
TreeDimensionTest : Trajectory Presence and Heterogeneity in Multivariate Data (Version 0.0.2)
2022
TreeDist : Calculate and Map Distances Between Phylogenetic Trees (Version 2.9.1)
2020
TreeSearch : Phylogenetic Analysis with Discrete Character Data (Version 1.5.1)
2017
TreeTools : Create, Modify and Analyse Phylogenetic Trees (Version 1.12.0)
2019
TriDimRegression : Bayesian Statistics for 2D/3D Transformations (Version 1.0.2)
2021
TrialEmulation : Causal Analysis of Observational Time-to-Event Data (Version 0.0.3.9)
2023
TruncatedNormal : Truncated Multivariate Normal and Student Distributions (Version 2.3)
2015
TukeyRegion : Tukey Region and Median (Version 0.1.6.3)
2017
UComp : Automatic Univariate Time Series Modelling of many Kinds (Version 5.0.4)
2020
UPCM : Uncertainty in Partial Credit Models (Version 0.0-3)
2021
Umatrix : Visualization of Structures in High-Dimensional Data (Version 4.0.1)
2017
UniExactFunTest : Uniform Exact Functional Tests for Contingency Tables (Version 1.0.0)
2023
UniIsoRegression : Unimodal and Isotonic L1, L2 and Linf Regression (Version 0.0-0)
2017
UtilityFrailtyPH12 : Implementing EFF-TOX and Monotone Utility Based Phase 12 Trials (Version 1.0)
2019
V8 : Embedded JavaScript and WebAssembly Engine for R (Version 6.0.0)
2014
VARDetect : Multiple Change Point Detection in Structural VAR Models (Version 0.1.8)
2021
VBJM : Variational Inference for Joint Model (Version 0.1.0)
2023
VBel : Variational Bayes for Fast and Accurate Empirical Likelihood Inference (Version 1.0.1)
2024
VEwaningVariant : Vaccine Efficacy Over Time - Variant Aware (Version 1.4)
2021
VIC5 : The Variable Infiltration Capacity (VIC) Hydrological Model (Version 0.2.6)
2021
VIM : Visualization and Imputation of Missing Values (Version 6.2.2)
2012
VMDecomp : Variational Mode Decomposition (Version 1.0.1)
2022
VUROCS : Volume under the ROC Surface for Multi-Class ROC Analysis (Version 1.0)
2020
VarSelLCM : Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values (Version 2.1.3.1)
2015
VeccTMVN : Multivariate Normal Probabilities using Vecchia Approximation (Version 1.2.0)
2024
VeryLargeIntegers : Store and Operate with Arbitrarily Large Integers (Version 0.2.1)
2017
WGCNA : Weighted Correlation Network Analysis (Version 1.73)
2010
WOAkMedoids : Whale Optimization Algorithm for K-Medoids Clustering (Version 0.1.0)
2024
WRI : Wasserstein Regression and Inference (Version 0.2.0)
2020
WaveSampling : Weakly Associated Vectors (WAVE) Sampling (Version 0.1.3)
2019
WebGestaltR : Gene Set Analysis Toolkit WebGestaltR (Version 0.4.6)
2017
WeibullR : Weibull Analysis for Reliability Engineering (Version 1.2.1)
2018
WeightedTreemaps : Generate and Plot Voronoi or Sunburst Treemaps from Hierarchical Data (Version 0.1.3)
2023
WhiteLabRt : Novel Methods for Reproduction Number Estimation, Back-Calculation, and Forecasting (Version 1.0.1)
2024
WinRatio : Win Ratio for Prioritized Outcomes and 95% Confidence Interval (Version 1.0)
2020
XBRL : Extraction of Business Financial Information from 'XBRL' Documents (Version 0.99.19.1)
2013
XDNUTS : Discontinuous Hamiltonian Monte Carlo with Varying Trajectory Length (Version 1.5)
2024
YPBP : Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials (Version 0.0.1)
2020
YPInterimTesting : Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials (Version 1.0.3)
2017
YPPE : Yang and Prentice Model with Piecewise Exponential Baseline Distribution (Version 1.0.1)
2019
YatchewTest : Yatchew (1997), De Chaisemartin & D'Haultfoeuille (2024) Linearity Test (Version 1.1.1)
2024
ZIPBayes : Bayesian Methods in the Analysis of Zero-Inflated Poisson Model (Version 1.0.2)
2021
ZVCV : Zero-Variance Control Variates (Version 2.1.2)
2019
aRtsy : Generative Art with 'ggplot2' (Version 1.0.0)
2021
abclass : Angle-Based Large-Margin Classifiers (Version 0.4.0)
2022
abcrf : Approximate Bayesian Computation via Random Forests (Version 1.9)
2015
abess : Fast Best Subset Selection (Version 0.4.9)
2021
abn : Modelling Multivariate Data with Additive Bayesian Networks (Version 3.1.1)
2011
abseil : 'C++' Header Files from 'Abseil' (Version 2023.8.2.1)
2023
abtest : Bayesian A/B Testing (Version 1.0.1)
2019
acc : Exploring Accelerometer Data (Version 1.3.3)
2015
accelerometry : Functions for Processing Accelerometer Data (Version 3.1.2)
2013
acebayes : Optimal Bayesian Experimental Design using the ACE Algorithm (Version 1.10)
2016
activegp : Gaussian Process Based Design and Analysis for the Active Subspace Method (Version 1.1.1)
2020
adaHuber : Adaptive Huber Estimation and Regression (Version 1.1)
2022
adaR : A Fast 'WHATWG' Compliant URL Parser (Version 0.3.3)
2023
adaptIVPT : Adaptive Bioequivalence Design for In-Vitro Permeation Tests (Version 1.1.0)
2022
ade4 : Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences (Version 1.7-22)
2002
adelie : Group Lasso and Elastic Net Solver for Generalized Linear Models (Version 1.0.2)
2024
adheRenceRX : Assess Medication Adherence from Pharmaceutical Claims Data (Version 1.0.0)
2020
adjSURVCI : Parameter and Adjusted Probability Estimation for Right-Censored Data (Version 1.0)
2021
adjclust : Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix (Version 0.6.10)
2017
admix : Package Admix for Admixture (aka Contamination) Models (Version 2.3.3)
2021
adpss : Design and Analysis of Locally or Globally Efficient Adaptive Designs (Version 0.1.2)
2018
aftgee : Accelerated Failure Time Model with Generalized Estimating Equations (Version 1.2.1)
2012
aftsem : Semiparametric Accelerated Failure Time Model (Version 1.0)
2024
agcounts : Calculate 'ActiGraph' Counts from Accelerometer Data (Version 0.6.6)
2024
agtboost : Adaptive and Automatic Gradient Boosting Computations (Version 0.9.3)
2020
ahMLE : Methods for the Additive Hazard Model (Version 1.20.1)
2021
aifeducation : Artificial Intelligence for Education (Version 0.3.3)
2023
aihuman : Experimental Evaluation of Algorithm-Assisted Human Decision-Making (Version 0.1.0)
2023
alakazam : Immunoglobulin Clonal Lineage and Diversity Analysis (Version 1.3.0)
2016
alcyon : Spatial Network Analysis (Version 0.5.0)
2024
alien : Estimate Invasive and Alien Species (IAS) Introduction Rates (Version 1.0.2)
2024
alpaca : Fit GLM's with High-Dimensional k-Way Fixed Effects (Version 0.3.4)
2018
alphabetr : Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells (Version 0.2.2)
2017
alqrfe : Adaptive Lasso Quantile Regression with Fixed Effects (Version 1.1)
2022
ambit : Simulation and Estimation of Ambit Processes (Version 0.1.2)
2022
ampir : Predict Antimicrobial Peptides (Version 1.1.0)
2019
anMC : Compute High Dimensional Orthant Probabilities (Version 0.2.5)
2017
aniSNA : Statistical Network Analysis of Animal Social Networks (Version 1.1.1)
2023
anomaly : Detecting Anomalies in Data (Version 4.3.3)
2018
anytime : Anything to 'POSIXct' or 'Date' Converter (Version 0.3.9)
2016
aorsf : Accelerated Oblique Random Forests (Version 0.1.5)
2022
apcf : Adapted Pair Correlation Function (Version 0.3.1)
2019
apcluster : Affinity Propagation Clustering (Version 1.4.13)
2010
ape : Analyses of Phylogenetics and Evolution (Version 5.8)
2002
aphid : Analysis with Profile Hidden Markov Models (Version 1.3.5)
2017
aphylo : Statistical Inference and Prediction of Annotations in Phylogenetic Trees (Version 0.3-3)
2022
apollo : Tools for Choice Model Estimation and Application (Version 0.3.4)
2019
aricode : Efficient Computations of Standard Clustering Comparison Measures (Version 1.0.3)
2018
armspp : Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp' (Version 0.0.2)
2019
arrApply : Apply a Function to a Margin of an Array (Version 2.2)
2016
ashr : Methods for Adaptive Shrinkage, using Empirical Bayes (Version 2.2-63)
2016
asmbPLS : Predicting and Classifying Patient Phenotypes with Multi-Omics Data (Version 1.0.0)
2023
aspline : Spline Regression with Adaptive Knot Selection (Version 0.2.0)
2021
ast2ast : Translates an R Function to a C++ Function (Version 0.3.2)
2022
asteRisk : Computation of Satellite Position (Version 1.4.3)
2021
atakrig : Area-to-Area Kriging (Version 0.9.8.1)
2020
augSIMEX : Analysis of Data with Mixed Measurement Error and Misclassification in Covariates (Version 3.7.4)
2017
aum : Area Under Minimum of False Positives and Negatives (Version 2024.6.19)
2022
autoFRK : Automatic Fixed Rank Kriging (Version 1.4.3)
2018
autoRasch : Semi-Automated Rasch Analysis (Version 0.2.2)
2022
autothresholdr : An R Port of the 'ImageJ' Plugin 'Auto Threshold' (Version 1.4.2)
2017
avar : Allan Variance (Version 0.1.3)
2019
bWGR : Bayesian Whole-Genome Regression (Version 2.2.11)
2015
backbone : Extracts the Backbone from Graphs (Version 2.1.4)
2019
baclava : Bayesian Analysis of Cancer Latency with Auxiliary Variable Augmentation (Version 1.0)
2024
baggingbwsel : Bagging Bandwidth Selection in Kernel Density and Regression Estimation (Version 1.1)
2021
baggr : Bayesian Aggregate Treatment Effects (Version 0.7.8)
2019
bakR : Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets (Version 1.0.1)
2022
baldur : Bayesian Hierarchical Modeling for Label-Free Proteomics (Version 0.0.3)
2023
bama : High Dimensional Bayesian Mediation Analysis (Version 1.3.0)
2019
bamm : Species Distribution Models as a Function of Biotic, Abiotic and Movement Factors (BAM) (Version 0.5.0)
2022
banditpam : Almost Linear-Time k-Medoids Clustering (Version 1.0-1)
2023
bartcs : Bayesian Additive Regression Trees for Confounder Selection (Version 1.2.2)
2022
basad : Bayesian Variable Selection with Shrinking and Diffusing Priors (Version 0.3.0)
2017
baseballr : Acquiring and Analyzing Baseball Data (Version 1.6.0)
2022
baskexact : Analytical Calculation of Basket Trial Operating Characteristics (Version 1.0.1)
2021
batchmix : Semi-Supervised Bayesian Mixture Models Incorporating Batch Correction (Version 2.2.1)
2022
batman : Convert Categorical Representations of Logicals to Actual Logicals (Version 0.1.0)
2015
bayMDS : Bayesian Multidimensional Scaling and Choice of Dimension (Version 2.0)
2021
bayesAB : Fast Bayesian Methods for AB Testing (Version 1.1.3)
2016
bayes4psy : User Friendly Bayesian Data Analysis for Psychology (Version 1.2.12)
2019
bayesCureRateModel : Bayesian Cure Rate Modeling for Time-to-Event Data (Version 1.3)
2024
bayesDP : Implementation of the Bayesian Discount Prior Approach for Clinical Trials (Version 1.3.6)
2017
bayesEO : Bayesian Smoothing of Remote Sensing Image Classification (Version 0.2.1)
2024
bayesGAM : Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo (Version 0.0.2)
2020
bayesImageS : Bayesian Methods for Image Segmentation using a Potts Model (Version 0.6-1)
2016
bayesPO : Bayesian Inference for Presence-Only Data (Version 0.5.0)
2021
bayesWatch : Bayesian Change-Point Detection for Process Monitoring with Fault Detection (Version 0.1.3)
2023
bayesZIB : Bayesian Zero-Inflated Bernoulli Regression Model (Version 0.0.5)
2021
bayescopulareg : Bayesian Copula Regression (Version 0.1.3)
2020
bayesdfa : Bayesian Dynamic Factor Analysis (DFA) with 'Stan' (Version 1.3.3)
2018
bayesforecast : Bayesian Time Series Modeling with Stan (Version 1.0.1)
2021
bayesianVARs : MCMC Estimation of Bayesian Vectorautoregressions (Version 0.1.4)
2024
bayeslm : Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors (Version 1.0.1)
2017
bayesm : Bayesian Inference for Marketing/Micro-Econometrics (Version 3.1-6)
2005
bayesmove : Non-Parametric Bayesian Analyses of Animal Movement (Version 0.2.1)
2020
baygel : Bayesian Shrinkage Estimators for Precision Matrices in Gaussian Graphical Models (Version 0.3.0)
2023
bbdetection : Identification of Bull and Bear States of the Market (Version 1.0)
2021
bbknnR : Perform Batch Balanced KNN in R (Version 1.1.1)
2022
bbl : Boltzmann Bayes Learner (Version 1.0.0)
2019
bbmix : Bayesian Model for Genotyping using RNA-Seq (Version 1.0.0)
2023
bcROCsurface : Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests (Version 1.0-6)
2016
bcf : Causal Inference using Bayesian Causal Forests (Version 2.0.2)
2018
bcpa : Behavioral Change Point Analysis of Animal Movement (Version 1.3.2)
2013
bea.R : Bureau of Economic Analysis API (Version 1.0.6)
2016
beanz : Bayesian Analysis of Heterogeneous Treatment Effect (Version 3.1)
2016
belg : Boltzmann Entropy of a Landscape Gradient (Version 1.5.3)
2018
bellreg : Count Regression Models Based on the Bell Distribution (Version 0.0.2.2)
2020
benchr : High Precise Measurement of R Expressions Execution Time (Version 0.2.5)
2016
bennu : Bayesian Estimation of Naloxone Kit Number Under-Reporting (Version 0.3.0)
2023
bespatial : Boltzmann Entropy for Spatial Data (Version 0.1.2)
2024
bestridge : A Comprehensive R Package for Best Subset Selection (Version 1.0.7)
2021
betaBayes : Bayesian Beta Regression (Version 1.0.1)
2021
beyondWhittle : Bayesian Spectral Inference for Time Series (Version 1.2.1)
2017
bfast : Breaks for Additive Season and Trend (Version 1.7.0)
2009
bfp : Bayesian Fractional Polynomials (Version 0.0-48)
2010
bggum : Bayesian Estimation of Generalized Graded Unfolding Model Parameters (Version 1.0.2)
2020
bgms : Bayesian Analysis of Networks of Binary and/or Ordinal Variables (Version 0.1.4)
2023
bgsmtr : Bayesian Group Sparse Multi-Task Regression (Version 0.7)
2016
biClassify : Binary Classification Using Extensions of Discriminant Analysis (Version 1.3)
2020
bife : Binary Choice Models with Fixed Effects (Version 0.7.2)
2016
bigMap : Big Data Mapping (Version 2.3.1)
2019
bigReg : Generalized Linear Models (GLM) for Large Data Sets (Version 0.1.5)
2016
bigSurvSGD : Big Survival Analysis Using Stochastic Gradient Descent (Version 0.0.1)
2020
bigergm : Fit, Simulate, and Diagnose Hierarchical Exponential-Family Models for Big Networks (Version 1.2.3)
2024
biglasso : Extending Lasso Model Fitting to Big Data (Version 1.6.0)
2016
bigmemory : Manage Massive Matrices with Shared Memory and Memory-Mapped Files (Version 4.6.4)
2008
bigreadr : Read Large Text Files (Version 0.2.5)
2018
bigrquerystorage : An Interface to Google's 'BigQuery Storage' API (Version 1.2.1)
2024
bigsnpr : Analysis of Massive SNP Arrays (Version 1.12.15)
2017
bigsparser : Sparse Matrix Format with Data on Disk (Version 0.7.3)
2020
bigstatsr : Statistical Tools for Filebacked Big Matrices (Version 1.6.1)
2017
bigtime : Sparse Estimation of Large Time Series Models (Version 0.2.3)
2017
bigutilsr : Utility Functions for Large-scale Data (Version 0.3.4)
2019
binGroup2 : Identification and Estimation using Group Testing (Version 1.3.1)
2020
binaryGP : Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response (Version 0.2)
2017
binaryMM : Flexible Marginalized Models for Binary Correlated Outcomes (Version 0.1.1)
2022
bindrcpp : An 'Rcpp' Interface to Active Bindings (Version 0.2.3)
2016
binsegRcpp : Efficient Implementation of Binary Segmentation (Version 2023.8.31)
2020
binspp : Bayesian Inference for Neyman-Scott Point Processes (Version 0.1.26)
2022
bio3d : Biological Structure Analysis (Version 2.4-5)
2014
bioacoustics : Analyse Audio Recordings and Automatically Extract Animal Vocalizations (Version 0.2.8)
2018
biosensors.usc : Distributional Data Analysis Techniques for Biosensor Data (Version 1.0)
2022
birdie : Bayesian Instrumental Regression for Disparity Estimation (Version 0.6.1)
2024
bisque : Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models (Version 1.0.2)
2019
bistablehistory : Cumulative History Analysis for Bistable Perception Time Series (Version 1.1.2)
2021
biwavelet : Conduct Univariate and Bivariate Wavelet Analyses (Version 0.20.22)
2012
blackbox : Black Box Optimization and Exploration of Parameter Space (Version 1.1.46)
2016
blaster : Native R Implementation of an Efficient BLAST-Like Algorithm (Version 1.0.7)
2021
blatent : Bayesian Latent Variable Models (Version 0.1.2)
2020
blindrecalc : Blinded Sample Size Recalculation (Version 1.0.1)
2020
blavaan : Bayesian Latent Variable Analysis (Version 0.5-6)
2015
bliss : Bayesian Functional Linear Regression with Sparse Step Functions (Version 1.1.1)
2019
blockCV : Spatial and Environmental Blocking for K-Fold and LOO Cross-Validation (Version 3.1-5)
2020
blockForest : Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data (Version 0.2.6)
2018
blockmodels : Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm (Version 1.1.5)
2015
blorr : Tools for Developing Binary Logistic Regression Models (Version 0.3.0)
2018
bmabasket : Bayesian Model Averaging for Basket Trials (Version 0.1.2)
2021
bmgarch : Bayesian Multivariate GARCH Models (Version 2.0.0)
2020
bmggum : Bayesian Multidimensional Generalized Graded Unfolding Model (Version 0.1.0)
2021
bmlm : Bayesian Multilevel Mediation (Version 1.3.15)
2016
bmstdr : Bayesian Modeling of Spatio-Temporal Data with R (Version 0.7.9)
2022
bnclassify : Learning Discrete Bayesian Network Classifiers from Data (Version 0.4.8)
2015
bnnSurvival : Bagged k-Nearest Neighbors Survival Prediction (Version 0.1.5)
2016
bonsaiforest : Shrinkage Based Forest Plots (Version 0.1.1)
2024
boodist : Some Distributions from the 'Boost' Library and More (Version 1.0.0)
2023
bootCT : Bootstrapping the ARDL Tests for Cointegration (Version 2.1.0)
2022
bootUR : Bootstrap Unit Root Tests (Version 1.0.4)
2020
borrowr : Estimate Causal Effects with Borrowing Between Data Sources (Version 0.2.0)
2019
bpgmm : Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models (Version 1.0.9)
2019
bpnreg : Bayesian Projected Normal Regression Models for Circular Data (Version 2.0.3)
2018
bpr : Fitting Bayesian Poisson Regression (Version 1.0.8)
2021
braggR : Calculate the Revealed Aggregator of Probability Predictions (Version 0.1.1)
2021
bravo : Bayesian Screening and Variable Selection (Version 3.2.2)
2020
breakfast : Methods for Fast Multiple Change-Point/Break-Point Detection and Estimation (Version 2.5)
2017
breathteststan : Stan-Based Fit to Gastric Emptying Curves (Version 0.8.5)
2017
brif : A Tree and Forest Tool for Classification and Regression (Version 1.4.1)
2022
bridgesampling : Bridge Sampling for Marginal Likelihoods and Bayes Factors (Version 1.1-2)
2017
brlrmr : Bias Reduction with Missing Binary Response (Version 0.1.7)
2017
brms.mmrm : Bayesian MMRMs using 'brms' (Version 1.1.1)
2023
brms : Bayesian Regression Models using 'Stan' (Version 2.22.0)
2015
brmsmargins : Bayesian Marginal Effects for 'brms' Models (Version 0.2.0)
2021
bsearchtools : Binary Search Tools (Version 0.0.61)
2016
bsnsing : Build Decision Trees with Optimal Multivariate Splits (Version 1.0.1)
2022
bspline : B-Spline Interpolation and Regression (Version 2.2.2)
2022
bsplinePsd : Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors (Version 0.6.0)
2017
bssm : Bayesian Inference of Non-Linear and Non-Gaussian State Space Models (Version 2.0.2)
2017
bsvarSIGNs : Bayesian SVARs with Sign, Zero, and Narrative Restrictions (Version 1.0.1)
2024
bsvars : Bayesian Estimation of Structural Vector Autoregressive Models (Version 3.2)
2022
bsynth : Bayesian Synthetic Control (Version 1.0)
2024
btb : Beyond the Border - Kernel Density Estimation for Urban Geography (Version 0.2.0)
2016
bvarsv : Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters (Version 1.1)
2014
bvartools : Bayesian Inference of Vector Autoregressive and Error Correction Models (Version 0.2.4)
2019
bvhar : Bayesian Vector Heterogeneous Autoregressive Modeling (Version 2.1.2)
2023
bws : Bayesian Weighted Sums (Version 0.1.0)
2022
bzinb : Bivariate Zero-Inflated Negative Binomial Model Estimator (Version 1.0.8)
2019
cIRT : Choice Item Response Theory (Version 1.3.2)
2015
cPCG : Efficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations (Version 1.0)
2019
cTMed : Continuous Time Mediation (Version 1.0.1)
2024
calculus : High Dimensional Numerical and Symbolic Calculus (Version 1.0.1)
2019
calibrationband : Calibration Bands (Version 0.2.1)
2022
carSurv : Correlation-Adjusted Regression Survival (CARS) Scores (Version 1.0.0)
2018
carat : Covariate-Adaptive Randomization for Clinical Trials (Version 2.2.1)
2020
cartography : Thematic Cartography (Version 3.1.4)
2015
castor : Efficient Phylogenetics on Large Trees (Version 1.8.2)
2017
catSurv : Computerized Adaptive Testing for Survey Research (Version 1.5.0)
2017
catlearn : Formal Psychological Models of Categorization and Learning (Version 1.0)
2016
catsim : Binary and Categorical Image Similarity Index (Version 0.2.4)
2020
causalOT : Optimal Transport Weights for Causal Inference (Version 1.0.2)
2022
cbbinom : Continuous Analog of a Beta-Binomial Distribution (Version 0.2.0)
2024
cbinom : Continuous Analog of a Binomial Distribution (Version 1.6)
2018
cbq : Conditional Binary Quantile Models (Version 0.2.0.3)
2020
ccaPP : (Robust) Canonical Correlation Analysis via Projection Pursuit (Version 0.3.4)
2012
cccp : Cone Constrained Convex Problems (Version 0.3-1)
2015
ccrtm : Coupled Chain Radiative Transfer Models (Version 0.1.6)
2021
cctools : Tools for the Continuous Convolution Trick in Nonparametric Estimation (Version 0.1.2)
2017
cdcsis : Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference (Version 2.0.5)
2014
cellWise : Analyzing Data with Cellwise Outliers (Version 2.5.3)
2016
cenROC : Estimating Time-Dependent ROC Curve and AUC for Censored Data (Version 2.0.0)
2020
cgAUC : Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it (Version 1.2.1)
2012
cglm : Fits Conditional Generalized Linear Models (Version 1.1)
2018
changepoints : A Collection of Change-Point Detection Methods (Version 1.1.0)
2021
chillR : Statistical Methods for Phenology Analysis in Temperate Fruit Trees (Version 0.75)
2013
chopthin : The Chopthin Resampler (Version 0.2.2)
2015
chouca : A Stochastic Cellular Automaton Engine (Version 0.1.99)
2024
chunkR : Read Tables in Chunks (Version 1.1.1)
2018
circlus : Clustering and Simulation of Spherical Cauchy and PKBD Models (Version 0.0.1)
2024
circumplex : Analysis and Visualization of Circular Data (Version 1.0.0)
2018
ciu : Contextual Importance and Utility (Version 0.6.0)
2020
cladoRcpp : C++ Implementations of Phylogenetic Cladogenesis Calculations (Version 0.15.1)
2013
classifierplots : Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots (Version 1.4.0)
2017
cld2 : Google's Compact Language Detector 2 (Version 1.2.5)
2017
cld3 : Google's Compact Language Detector 3 (Version 1.6.1)
2017
clevr : Clustering and Link Prediction Evaluation in R (Version 0.1.2)
2020
clhs : Conditioned Latin Hypercube Sampling (Version 0.9.0)
2012
clifford : Arbitrary Dimensional Clifford Algebras (Version 1.0-8)
2020
clogitL1 : Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties (Version 1.5)
2013
clogitboost : Boosting Conditional Logit Model (Version 1.1)
2015
cloneRate : Estimate Growth Rates from Phylogenetic Trees (Version 0.2.3)
2023
clubpro : Classification Using Binary Procrustes Rotation (Version 0.6.2)
2023
clusrank : Wilcoxon Rank Tests for Clustered Data (Version 1.0-4)
2015
clustAnalytics : Cluster Evaluation on Graphs (Version 0.5.5)
2022
clusterHD : Tools for Clustering High-Dimensional Data (Version 1.0.2)
2022
clusterMI : Cluster Analysis with Missing Values by Multiple Imputation (Version 1.2.2)
2024
clustermq : Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) (Version 0.9.5)
2017
clustur : Clustering (Version 0.1.0)
0
cmenet : Bi-Level Selection of Conditional Main Effects (Version 0.1.2)
2019
cmstatrExt : More Statistical Methods for Composite Material Data (Version 0.4.0)
2024
cna : Causal Modeling with Coincidence Analysis (Version 3.6.2)
2014
cnaOpt : Optimizing Consistency and Coverage in Configurational Causal Modeling (Version 0.5.2)
2019
cnum : Chinese Numerals Processing (Version 0.1.3)
2020
coala : A Framework for Coalescent Simulation (Version 0.7.2)
2015
coconots : Convolution-Closed Models for Count Time Series (Version 1.1.3)
2023
cocons : Covariate-Based Covariance Functions for Nonstationary Spatial Modeling (Version 0.1.3)
2024
coda.base : A Basic Set of Functions for Compositional Data Analysis (Version 0.5.5)
2017
coga : Convolution of Gamma Distributions (Version 1.2.2)
2017
coglasso : Collaborative Graphical Lasso - Multi-Omics Network Reconstruction (Version 1.0.2)
2024
collUtils : Auxiliary Package for Package 'CollapsABEL' (Version 1.0.5)
2016
collapse : Advanced and Fast Data Transformation (Version 2.0.17)
2020
colorednoise : Simulate Temporally Autocorrelated Populations (Version 1.1.2)
2017
colourvalues : Assigns Colours to Values (Version 0.3.9)
2018
comat : Creates Co-Occurrence Matrices of Spatial Data (Version 0.9.5)
2019
combinIT : A Combined Interaction Test for Unreplicated Two-Way Tables (Version 2.0.0)
2022
combiter : Combinatorics Iterators (Version 1.0.3)
2016
communication : Feature Extraction and Model Estimation for Audio of Human Speech (Version 0.1)
2021
comparator : Comparison Functions for Clustering and Record Linkage (Version 0.1.2)
2020
compas : Conformational Manipulations of Protein Atomic Structures (Version 0.1.1)
2018
comperank : Ranking Methods for Competition Results (Version 0.1.1)
2018
conStruct : Models Spatially Continuous and Discrete Population Genetic Structure (Version 1.0.6)
2018
concom : Connected Components of an Undirected Graph (Version 1.0.0)
2022
coneproj : Primal or Dual Cone Projections with Routines for Constrained Regression (Version 1.19)
2013
conleyreg : Estimations using Conley Standard Errors (Version 0.1.7)
2021
conquer : Convolution-Type Smoothed Quantile Regression (Version 1.3.3)
2020
conquestr : An R Package to Extend 'ACER ConQuest' (Version 1.3.4)
2019
contoureR : Contouring of Non-Regular Three-Dimensional Data (Version 1.0.5)
2015
cooltools : Practical Tools for Scientific Computations and Visualizations (Version 2.4)
2022
copCAR : Fitting the copCAR Regression Model for Discrete Areal Data (Version 2.0-4)
2014
cophescan : Adaptation of the Coloc Method for PheWAS (Version 1.4.1)
2023
copre : Tools for Nonparametric Martingale Posterior Sampling (Version 0.2.1)
2022
cord : Community Estimation in G-Models via CORD (Version 0.1.1)
2015
coreCollection : Core Collection (Version 0.9.5)
2022
corels : R Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner (Version 0.0.4)
2020
corpustools : Managing, Querying and Analyzing Tokenized Text (Version 0.5.1)
2017
corrcoverage : Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping (Version 1.2.1)
2019
cosimmr : Fast Fitting of Stable Isotope Mixing Models with Covariates (Version 1.0.12)
2024
countSTAR : Flexible Modeling of Count Data (Version 1.0.2)
2023
countsplit : Splitting a Count Matrix into Independent Folds (Version 4.0.0)
2023
covTestR : Covariance Matrix Tests (Version 0.1.4)
2017
covafillr : Local Polynomial Regression of State Dependent Covariates in State-Space Models (Version 0.4.4)
2016
covdepGE : Covariate Dependent Graph Estimation (Version 1.0.1)
2022
coveffectsplot : Produce Forest Plots to Visualize Covariate Effects (Version 1.0.5)
2018
covglasso : Sparse Covariance Matrix Estimation (Version 1.0.3)
2020
coxrt : Cox Proportional Hazards Regression for Right-Truncated Data (Version 1.0.3)
2018
cpop : Detection of Multiple Changes in Slope in Univariate Time-Series (Version 1.0.7)
2022
cpp11 : A C++11 Interface for R's C Interface (Version 0.5.0)
2020
cppRouting : Algorithms for Routing and Solving the Traffic Assignment Problem (Version 3.1)
2019
cppcontainers : 'C++' Standard Template Library Containers (Version 1.0.1)
2024
cpr : Control Polygon Reduction (Version 0.4.0)
2017
cpss : Change-Point Detection by Sample-Splitting Methods (Version 0.0.3)
2020
cqrReg : Quantile, Composite Quantile Regression and Regularized Versions (Version 1.2.1)
2014
cramer : Multivariate Nonparametric Cramer-Test for the Two-Sample-Problem (Version 0.9-4)
2001
crandep : Network Analysis of Dependencies of CRAN Packages (Version 0.3.10)
2020
crawl : Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data (Version 2.3.0)
2008
crctStepdown : Univariate Analysis of Cluster Trials with Multiple Outcomes (Version 0.5.2)
2021
crfsuite : Conditional Random Fields for Labelling Sequential Data in Natural Language Processing (Version 0.4.2)
2018
crmPack : Object-Oriented Implementation of CRM Designs (Version 1.0.6)
2015
crosstalkr : Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks (Version 1.0.5)
2021
cstab : Selection of Number of Clusters via Normalized Clustering Instability (Version 0.2-2)
2016
ctgt : Closed Testing with Globaltest for Pathway Analysis (Version 2.0.1)
2020
ctmcd : Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data (Version 1.4.4)
2016
ctsem : Continuous Time Structural Equation Modelling (Version 3.10.1)
2015
cubature : Adaptive Multivariate Integration over Hypercubes (Version 2.1.1)
2009
cuda.ml : R Interface for the RAPIDS cuML Suite of Libraries (Version 0.3.2)
2021
curstatCI : Confidence Intervals for the Current Status Model (Version 0.1.1)
2017
curveDepth : Tukey Curve Depth and Distance in the Space of Curves (Version 0.1.0.9)
2019
cusum : Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance (Version 0.4.1)
2018
cutpointr : Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks (Version 1.1.2)
2018
cvLM : Cross-Validation for Linear & Ridge Regression Models (Version 1.0.4)
2024
cxxfunplus : Extend 'cxxfunction' by Saving the Dynamic Shared Objects (Version 1.0.2)
2012
cycleRtools : Tools for Cycling Data Analysis (Version 1.1.1)
2015
cytometree : Automated Cytometry Gating and Annotation (Version 2.0.2)
2017
dHSIC : Independence Testing via Hilbert Schmidt Independence Criterion (Version 2.1)
2016
dann : Discriminant Adaptive Nearest Neighbor Classification (Version 1.0.0)
2019
dartR.base : Analysing 'SNP' and 'Silicodart' Data - Basic Functions (Version 0.98)
2023
dartR.sim : Computer Simulations of 'SNP' Data (Version 0.70)
2023
dartR : Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 2.9.7)
2017
datafsm : Estimating Finite State Machine Models from Data (Version 0.2.4)
2015
datasailr : Row by Row Data Processing Tool, Using 'DataSailr' Script (Version 0.8.11)
2020
datefixR : Standardize Dates in Different Formats or with Missing Data (Version 1.7.0)
2021
dateutils : Date Utils (Version 0.1.5)
2021
dbmss : Distance-Based Measures of Spatial Structures (Version 2.9-2)
2012
dbnR : Dynamic Bayesian Network Learning and Inference (Version 0.7.9)
2020
dbscan : Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms (Version 1.2-0)
2015
dccpp : Fast Computation of Distance Correlations (Version 0.1.0)
2022
dcm2 : Calculating the M2 Model Fit Statistic for Diagnostic Classification Models (Version 1.0.2)
2023
dcortools : Providing Fast and Flexible Functions for Distance Correlation Analysis (Version 0.1.6)
2021
dcov : A Fast Implementation of Distance Covariance (Version 0.1.1)
2020
dcurver : Utility Functions for Davidian Curves (Version 0.9.2)
2018
ddalpha : Depth-Based Classification and Calculation of Data Depth (Version 1.3.16)
2013
ddsPLS : Data-Driven Sparse Partial Least Squares (Version 1.2.1)
2018
decido : Bindings for 'Mapbox' Ear Cutting Triangulation Library (Version 0.3.0)
2018
deepgp : Bayesian Deep Gaussian Processes using MCMC (Version 1.1.3)
2020
deforestable : Classify RGB Images into Forest or Non-Forest (Version 3.1.1)
2022
deform : Spatial Deformation and Dimension Expansion Gaussian Processes (Version 1.0.0)
2023
deformula : Integration of One-Dimensional Functions with Double Exponential Formulas (Version 0.1.2)
2015
demu : Optimal Design Emulators via Point Processes (Version 0.3.0)
2018
denim : Generate and Simulate Deterministic Discrete-Time Compartmental Models (Version 1.0.0)
2024
densEstBayes : Density Estimation via Bayesian Inference Engines (Version 1.0-2.2)
2020
depcoeff : Dependency Coefficients (Version 0.0.1)
2020
deseats : Data-Driven Locally Weighted Regression for Trend and Seasonality in TS (Version 1.1.0)
2023
desla : Desparsified Lasso Inference for Time Series (Version 0.3.0)
2021
detectRUNS : Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes (Version 0.9.6)
2018
detrendr : Detrend Images (Version 0.6.15)
2017
dexterMST : CML and Bayesian Calibration of Multistage Tests (Version 0.9.6)
2018
dexter : Data Management and Analysis of Tests (Version 1.5.0)
2017
dfms : Dynamic Factor Models (Version 0.2.2)
2022
dfphase1 : Phase I Control Charts (with Emphasis on Distribution-Free Methods) (Version 1.2.0)
2016
dga : Capture-Recapture Estimation using Bayesian Model Averaging (Version 2.0.1)
2015
dggridR : Discrete Global Grids (Version 3.1.0)
2016
dgumbel : The Gumbel Distribution Functions and Gradients (Version 1.0.1)
2020
diagis : Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling (Version 0.2.3)
2016
diceR : Diverse Cluster Ensemble in R (Version 2.2.0)
2017
didimputation : Imputation Estimator from Borusyak, Jaravel, and Spiess (2021) (Version 0.3.0)
2021
diffmatchpatch : String Diff, Match, and Patch Utilities (Version 0.1.0)
2021
diffudist : Diffusion Distance for Complex Networks (Version 1.0.1)
2021
dina : Bayesian Estimation of DINA Model (Version 2.0.0)
2015
dipsaus : A Dipping Sauce for Data Analysis and Visualizations (Version 0.2.9)
2019
disbayes : Bayesian Multi-State Modelling of Chronic Disease Burden Data (Version 1.1.0)
2022
disclapmix : Discrete Laplace Mixture Inference using the EM Algorithm (Version 1.7.4)
2012
disclapmix2 : Mixtures of Discrete Laplace Distributions using Numerical Optimisation (Version 0.6.1)
2023
discretefit : Simulated Goodness-of-Fit Tests for Discrete Distributions (Version 0.1.2)
2021
disk.frame : Larger-than-RAM Disk-Based Data Manipulation Framework (Version 0.8.3)
2019
dismo : Species Distribution Modeling (Version 1.3-14)
2010
distops : Usual Operations for Distance Matrices in R (Version 0.1.0)
2024
divDyn : Diversity Dynamics using Fossil Sampling Data (Version 0.8.2)
2018
diversityForest : Innovative Complex Split Procedures in Random Forests Through Candidate Split Sampling (Version 0.5.0)
2020
diversitree : Comparative 'Phylogenetic' Analyses of Diversification (Version 0.10-1)
2010
divest : Get Images Out of DICOM Format Quickly (Version 1.1.1)
2016
dlib : Allow Access to the 'Dlib' C++ Library (Version 1.0.3.1)
2017
dlmtree : Bayesian Treed Distributed Lag Models (Version 1.0.0)
2024
dng : Distributions and Gradients (Version 0.2.1)
2017
dnn : Deep Neural Network Tools for Probability and Statistic Models (Version 0.0.6)
2024
doc2vec : Distributed Representations of Sentences, Documents and Topics (Version 0.2.0)
2020
dodgr : Distances on Directed Graphs (Version 0.4.1)
2017
dosearch : Causal Effect Identification from Multiple Incomplete Data Sources (Version 1.0.11)
2019
dpcc : Dynamic Programming for Convex Clustering (Version 1.0.0)
2021
dpseg : Piecewise Linear Segmentation by Dynamic Programming (Version 0.1.1)
2020
dqrng : Fast Pseudo Random Number Generators (Version 0.4.1)
2018
dracor : Decode Draco Format 3D Mesh Data (Version 0.2.6)
2020
drake : A Pipeline Toolkit for Reproducible Computation at Scale (Version 7.13.10)
2017
drclust : Simultaneous Clustering and (or) Dimensionality Reduction (Version 0.1)
2024
drf : Distributional Random Forests (Version 1.1.0)
2020
drgee : Doubly Robust Generalized Estimating Equations (Version 1.1.10)
2013
drugDemand : Drug Demand Forecasting (Version 0.1.3)
2023
dscore : D-Score for Child Development (Version 1.9.0)
2020
dslice : Dynamic Slicing (Version 1.2.2)
2014
dsmisc : Data Science Box of Pandora Miscellaneous (Version 0.3.3)
2020
dtts : 'data.table' Time-Series (Version 0.1.3)
2022
dtwclust : Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance (Version 6.0.0)
2015
dvmisc : Convenience Functions, Moving Window Statistics, and Graphics (Version 1.1.4)
2017
dynConfiR : Dynamic Models for Confidence and Response Time Distributions (Version 0.0.4)
2022
dynatop : An Implementation of Dynamic TOPMODEL Hydrological Model in R (Version 0.2.3)
2022
dynmix : Estimation of Dynamic Finite Mixtures (Version 2.0)
2020
dynutils : Common Functionality for the 'dynverse' Packages (Version 1.0.11)
2018
eBsc : "Empirical Bayes Smoothing Splines with Correlated Errors" (Version 4.17)
2020
eDITH : Model Transport of Environmental DNA in River Networks (Version 1.0.0)
2023
eDMA : Dynamic Model Averaging with Grid Search (Version 1.5-3)
2016
eDNAjoint : Joint Modeling of Traditional and Environmental DNA Survey Data in a Bayesian Framework (Version 0.2)
2024
eNchange : Ensemble Methods for Multiple Change-Point Detection (Version 1.0)
2020
earthtide : Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides (Version 0.1.5)
2019
easyVerification : Ensemble Forecast Verification for Large Data Sets (Version 0.4.5)
2015
ebTobit : Empirical Bayesian Tobit Matrix Estimation (Version 1.0.2)
2023
ebmstate : Empirical Bayes Multi-State Cox Model (Version 0.1.5)
2020
echoice2 : Choice Models with Economic Foundation (Version 0.2.4)
2023
econetwork : Analyzing Ecological Networks (Version 0.7.0)
2019
ecotraj : Ecological Trajectory Analysis (Version 0.1.1)
2021
ecp : Non-Parametric Multiple Change-Point Analysis of Multivariate Data (Version 3.1.6)
2013
ecr : Evolutionary Computation in R (Version 2.1.1)
2016
eddington : Compute a Cyclist's Eddington Number (Version 4.2.0)
2020
edgebundle : Algorithms for Bundling Edges in Networks and Visualizing Flow and Metro Maps (Version 0.4.2)
2021
edina : Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model (Version 0.1.1)
2020
edlibR : R Integration for Edlib, the C/C++ Library for Exact Pairwise Sequence Alignment using Edit (Levenshtein) Distance (Version 1.0.2)
2022
eggCounts : Hierarchical Modelling of Faecal Egg Counts (Version 2.4)
2013
eimpute : Efficiently Impute Large Scale Incomplete Matrix (Version 0.2.4)
2020
einsum : Einstein Summation (Version 0.1.2)
2021
eive : An Algorithm for Reducing Errors-in-Variable Bias in Simple and Multiple Linear Regressions (Version 3.1.3)
2012
elections.dtree : Ranked Voting Election Audits with Dirichlet-Trees (Version 2.0.0)
2022
elfDistr : Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution (Version 1.0.0)
2019
elgbd : Empirical Likelihood for General Block Designs (Version 0.9.0)
2024
elmNNRcpp : The Extreme Learning Machine Algorithm (Version 1.0.4)
2018
elo : Ranking Teams by Elo Rating and Comparable Methods (Version 3.0.2)
2017
emBayes : Robust Bayesian Variable Selection via Expectation-Maximization (Version 0.1.6)
2023
emIRT : EM Algorithms for Estimating Item Response Theory Models (Version 0.0.14)
2015
empichar : Evaluates the Empirical Characteristic Function for Multivariate Samples (Version 1.0.1)
2019
endogeneity : Recursive Two-Stage Models to Address Endogeneity (Version 2.1.3)
2022
energy : E-Statistics: Multivariate Inference via the Energy of Data (Version 1.7-12)
2004
enerscape : Compute Energy Landscapes (Version 1.1.0)
2021
enmpa : Ecological Niche Modeling using Presence-Absence Data (Version 0.1.8)
2023
epinetr : Epistatic Network Modelling with Forward-Time Simulation (Version 0.96)
2020
epiphy : Analysis of Plant Disease Epidemics (Version 0.5.0)
2018
epizootic : Spatially Explicit Population Models of Disease Transmission in Wildlife (Version 1.0.0)
2024
epm : EcoPhyloMapper (Version 1.1.3)
2022
equateMultiple : Equating of Multiple Forms (Version 1.1.1)
2017
eratosthenes : Archaeological Synchronism (Version 0.0.2)
2024
ergMargins : Process Analysis for Exponential Random Graph Models (Version 1.3)
2019
ergmito : Exponential Random Graph Models for Small Networks (Version 0.3-1)
2020
errum : Exploratory Reduced Reparameterized Unified Model Estimation (Version 0.0.3)
2020
eseis : Environmental Seismology Toolbox (Version 0.7.3)
2018
esemifar : Smoothing Long-Memory Time Series (Version 2.0.1)
2021
espadon : Easy Study of Patient DICOM Data in Oncology (Version 1.8.0)
2022
esreg : Joint Quantile and Expected Shortfall Regression (Version 0.6.2)
2017
ess : Efficient Stepwise Selection in Decomposable Models (Version 1.1.2)
2017
essHist : The Essential Histogram (Version 1.2.2)
2018
estimatr : Fast Estimators for Design-Based Inference (Version 1.0.4)
2018
eulerr : Area-Proportional Euler and Venn Diagrams with Ellipses (Version 7.0.2)
2016
eummd : Efficient Univariate Maximum Mean Discrepancy (Version 0.2.0)
2023
etm : Empirical Transition Matrix (Version 1.1.1)
2008
eurodata : Fast and Easy Eurostat Data Import and Search (Version 1.7.0)
2022
evalR : Evaluation of Unverified Code (Version 0.0.1)
2022
evgam : Generalised Additive Extreme Value Models (Version 1.0.0)
2020
evinf : Inference with Extreme Value Inflated Count Data (Version 0.8.10)
2023
evitaicossa : Antiassociative Algebra (Version 0.0-1)
2024
ewp : An Empirical Model for Underdispersed Count Data (Version 0.1.1)
2024
exactextractr : Fast Extraction from Raster Datasets using Polygons (Version 0.10.0)
2019
exceedProb : Confidence Intervals for Exceedance Probability (Version 0.0.1)
2019
exdex : Estimation of the Extremal Index (Version 1.2.3)
2019
exif : Read EXIF Metadata from JPEGs (Version 0.1.0)
2015
expSBM : An Exponential Stochastic Block Model for Interaction Lengths (Version 1.3.5)
2019
expectreg : Expectile and Quantile Regression (Version 0.53)
2010
expperm : Computing Expectations and Marginal Likelihoods for Permutations (Version 1.6)
2019
extBatchMarking : Extended Batch Marking Models (Version 1.1.0)
2023
extraDistr : Additional Univariate and Multivariate Distributions (Version 1.10.0)
2016
extrememix : Bayesian Estimation of Extreme Value Mixture Models (Version 0.0.1)
2024
exuber : Econometric Analysis of Explosive Time Series (Version 1.0.2)
2018
eyelinkReader : Import Gaze Data for EyeLink Eye Tracker (Version 1.0.2)
2022
fDMA : Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes (Version 2.2.7)
2017
fICA : Classical, Reloaded and Adaptive FastICA Algorithms (Version 1.1-2)
2013
fHMM : Fitting Hidden Markov Models to Financial Data (Version 1.4.1)
2021
fRLR : Fit Repeated Linear Regressions (Version 1.3.0)
2017
fabMix : Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components (Version 5.1)
2018
fable.prophet : Prophet Modelling Interface for 'fable' (Version 0.1.0)
2020
fable : Forecasting Models for Tidy Time Series (Version 0.4.1)
2019
fableCount : INGARCH and GLARMA Models for Count Time Series in Fable Framework (Version 0.1.0)
2024
factorstochvol : Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models (Version 1.1.0)
2016
fad : Factor Analysis for Data (Version 0.9-1)
2020
fasano.franceschini.test : Fasano-Franceschini Test: A Multivariate Kolmogorov-Smirnov Two-Sample Test (Version 2.2.2)
2021
fastGHQuad : Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature (Version 1.0.1)
2011
fastGLCM : 'GLCM' Texture Features (Version 1.0.2)
2022
fastJT : Efficient Jonckheere-Terpstra Test Statistics (Version 1.0.6)
2017
fastLogisticRegressionWrap : Fast Logistic Regression Wrapper (Version 1.2.0)
2023
fastLink : Fast Probabilistic Record Linkage with Missing Data (Version 0.6.1)
2017
fastM : Fast Computation of Multivariate M-Estimators (Version 0.0-4)
2014
fastRhockey : Functions to Access Premier Hockey Federation and National Hockey League Play by Play Data (Version 0.4.0)
2021
fastText : Efficient Learning of Word Representations and Sentence Classification (Version 1.0.4)
2021
fastTextR : An Interface to the 'fastText' Library (Version 2.1.0)
2017
fastWavelets : Compute Maximal Overlap Discrete Wavelet Transform (MODWT) and À Trous Discrete Wavelet Transform (Version 1.0.1)
2022
fastTopics : Fast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data (Version 0.6-192)
2022
fastadi : Self-Tuning Data Adaptive Matrix Imputation (Version 0.1.1)
2022
fastcmh : Significant Interval Discovery with Categorical Covariates (Version 0.2.7)
2016
fastcpd : Fast Change Point Detection via Sequential Gradient Descent (Version 0.14.6)
2023
fasterElasticNet : An Amazing Fast Way to Fit Elastic Net (Version 1.1.2)
2018
fasterize : Fast Polygon to Raster Conversion (Version 1.1.0)
2018
fastglm : Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen' (Version 0.0.3)
2019
fastkmedoids : Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS (Version 1.2)
2020
fastglmpca : Fast Algorithms for Generalized Principal Component Analysis (Version 0.1-103)
2024
fastliu : Fast Functions for Liu Regression with Regularization Parameter and Statistics (Version 1.0)
2024
fastmit : Fast Mutual Information Based Independence Test (Version 0.1.1)
2019
fastpos : Finds the Critical Sequential Point of Stability for a Pearson Correlation (Version 0.5.1)
2019
fastqq : Faster Generation of Quantile Quantile Plots with Large Samples (Version 0.1.3)
2021
fastshap : Fast Approximate Shapley Values (Version 0.1.1)
2019
fbroc : Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves (Version 0.4.1)
2015
fcci : Feldman-Cousins Confidence Intervals (Version 1.0.1)
2021
fcaR : Formal Concept Analysis (Version 1.2.2)
2020
fcirt : Forced Choice in Item Response Theory (Version 0.1.0)
2022
fclust : Fuzzy Clustering (Version 2.1.1.1)
2013
fctbases : Functional Bases (Version 1.1.1)
2020
fdaMixed : Functional Data Analysis in a Mixed Model Framework (Version 0.6.1)
2011
fdaSP : Sparse Functional Data Analysis Methods (Version 1.1.1)
2023
fdaconcur : Concurrent Regression and History Index Models for Functional Data (Version 0.1.3)
2022
fdacluster : Joint Clustering and Alignment of Functional Data (Version 0.3.0)
2022
fdadensity : Functional Data Analysis for Density Functions by Transformation to a Hilbert Space (Version 0.1.2)
2017
fdapace : Functional Data Analysis and Empirical Dynamics (Version 0.6.0)
2016
fdarep : Two-Dimensional FPCA, Marginal FPCA, and Product FPCA for Repeated Functional Data (Version 0.1.1)
2024
fdasrvf : Elastic Functional Data Analysis (Version 2.3.3)
2012
fddm : Fast Implementation of the Diffusion Decision Model (Version 1.0-2)
2020
fdesigns : Optimal Experimental Designs for Functional/Dynamic Models (Version 1.0)
2024
feather : R Bindings to the Feather 'API' (Version 0.3.5)
2016
fect : Fixed Effects Counterfactuals (Version 1.0.0)
2022
fedmatch : Fast, Flexible, and User-Friendly Record Linkage Methods (Version 2.0.6)
2021
fiberLD : Fiber Length Determination (Version 0.1-8)
2019
fido : Bayesian Multinomial Logistic Normal Regression (Version 1.1.1)
2022
filearray : File-Backed Array for Out-of-Memory Computation (Version 0.1.9)
2021
filling : Matrix Completion, Imputation, and Inpainting Methods (Version 0.2.3)
2017
finalsize : Calculate the Final Size of an Epidemic (Version 0.2.1)
2022
fingerPro : Sediment Source Fingerprinting (Version 1.1)
2018
finity : Test for Finiteness of Moments in a Distribution (Version 0.1.5)
2020
fipp : Induced Priors in Bayesian Mixture Models (Version 1.0.0)
2021
fixest : Fast Fixed-Effects Estimations (Version 0.12.1)
2019
flam : Fits Piecewise Constant Models with Data-Adaptive Knots (Version 3.2)
2014
flamingos : Functional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos') (Version 0.1.0)
2019
flan : FLuctuation ANalysis on Mutation Models (Version 1.0)
2016
flexpolyline : Flexible Polyline Encoding (Version 0.3.0)
2020
flexsurv : Flexible Parametric Survival and Multi-State Models (Version 2.3.2)
2011
flintyR : Simple and Flexible Tests of Sample Exchangeability (Version 0.1.0)
2021
flipr : Flexible Inference via Permutations in R (Version 0.3.3)
2021
flock : Process Synchronization Using File Locks (Version 0.7)
2016
flps : Fully-Latent Principal Stratification (Version 1.1.0)
2023
flying : Simulation of Bird Flight Range (Version 0.1.3)
2020
fmerPack : Tools of Heterogeneity Pursuit via Finite Mixture Effects Model (Version 0.0-1)
2021
fmf : Fast Class Noise Detector with Multi-Factor-Based Learning (Version 1.1.1)
2020
fmesher : Triangle Meshes and Related Geometry Tools (Version 0.2.0)
2023
fmtr : Easily Apply Formats to Data (Version 1.6.5)
2020
fntl : Numerical Tools for 'Rcpp' and Lambda Functions (Version 0.1.1)
2024
folda : Forward Stepwise Discriminant Analysis with Pillai's Trace (Version 0.2.0)
2024
forecast : Forecasting Functions for Time Series and Linear Models (Version 8.23.0)
2009
forecastSNSTS : Forecasting for Stationary and Non-Stationary Time Series (Version 1.3-0)
2016
forestControl : Approximate False Positive Rate Control in Selection Frequency for Random Forest (Version 0.2.2)
2018
fourPNO : Bayesian 4 Parameter Item Response Model (Version 1.1.0)
2015
fourierin : Computes Numeric Fourier Integrals (Version 0.2.5)
2016
fpeek : Check Text Files Content at a Glance (Version 0.1.2)
2018
fplot : Automatic Distribution Graphs Using Formulas (Version 1.1.0)
2019
frab : How to Add Two R Tables (Version 0.0-6)
2023
fractional : Vulgar Fractions in R (Version 0.1.3)
2016
fracture : Convert Decimals to Fractions (Version 0.2.1)
2020
frailtyEM : Fitting Frailty Models with the EM Algorithm (Version 1.0.1)
2017
frailtyMMpen : Efficient Algorithm for High-Dimensional Frailty Model (Version 1.2.1)
2023
frechet : Statistical Analysis for Random Objects and Non-Euclidean Data (Version 0.3.0)
2020
free : Flexible Regularized Estimating Equations (Version 1.0.2)
2022
freealg : The Free Algebra (Version 1.1-8)
2019
fromo : Fast Robust Moments (Version 0.2.3)
2016
fssemR : Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network (Version 0.1.8)
2019
fst : Lightning Fast Serialization of Data Frames (Version 0.9.8)
2017
fstcore : R Bindings to the 'Fstlib' Library (Version 0.9.18)
2020
funcharts : Functional Control Charts (Version 1.5.0)
2021
fuser : Fused Lasso for High-Dimensional Regression over Groups (Version 1.0.1)
2017
fwsim : Fisher-Wright Population Simulation (Version 0.3.4)
2012
gKRLS : Generalized Kernel Regularized Least Squares (Version 1.0.4)
2023
gMWT : Generalized Mann-Whitney Type Tests (Version 1.4)
2012
gRain : Bayesian Networks (Version 1.4.5)
2008
gRbase : A Package for Graphical Modelling in R (Version 2.0.3)
2004
gRc : Inference in Graphical Gaussian Models with Edge and Vertex Symmetries (Version 0.5.1)
2007
gRim : Graphical Interaction Models (Version 0.3.4)
2011
galamm : Generalized Additive Latent and Mixed Models (Version 0.2.1)
2023
gamselBayes : Bayesian Generalized Additive Model Selection (Version 2.0-1)
2022
gamstransfer : A Data Interface Between 'GAMS' and R (Version 3.0.4)
2024
ganDataModel : Build a Metric Subspaces Data Model for a Data Source (Version 1.1.7)
2022
ganGenerativeData : Generate Generative Data for a Data Source (Version 2.1.3)
2021
gapfill : Fill Missing Values in Satellite Data (Version 0.9.6-1)
2016
gaselect : Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data (Version 1.0.22)
2015
gasper : Graph Signal Processing (Version 1.1.6)
2020
gastempt : Analyzing Gastric Emptying from MRI or Scintigraphy (Version 0.6.1)
2017
gaston : Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models (Version 1.6)
2015
gbeta : Generalized Beta and Beta Prime Distributions (Version 0.1.0)
2020
gbp : A Bin Packing Problem Solver (Version 0.1.0.4)
2017
gcKrig : Analysis of Geostatistical Count Data using Gaussian Copulas (Version 1.1.8)
2016
gdalcubes : Earth Observation Data Cubes from Satellite Image Collections (Version 0.7.0)
2019
gdalraster : Bindings to the 'Geospatial Data Abstraction Library' Raster API (Version 1.11.1)
2023
gdm : Generalized Dissimilarity Modeling (Version 1.6.0-3)
2015
gdpc : Generalized Dynamic Principal Components (Version 1.1.4)
2016
gdtools : Utilities for Graphical Rendering and Fonts Management (Version 0.4.1)
2015
gear : Geostatistical Analysis in R (Version 0.3.4)
2015
gdverse : Analysis of Spatial Stratified Heterogeneity (Version 1.2)
2024
geeVerse : A Comprehensive Analysis of High Dimensional Longitudinal Data (Version 0.2.1)
2024
geiger : Analysis of Evolutionary Diversification (Version 2.0.11)
2007
gen3sis : General Engine for Eco-Evolutionary Simulations (Version 1.5.11)
2020
gena : Genetic Algorithm and Particle Swarm Optimization (Version 1.0.0)
2022
genepop : Population Genetic Data Analysis Using Genepop (Version 1.2.2)
2017
genie : Fast, Robust, and Outlier Resistant Hierarchical Clustering (Version 1.0.5)
2016
genieclust : Fast and Robust Hierarchical Clustering with Noise Points Detection (Version 1.1.6)
2020
genio : Genetics Input/Output Functions (Version 1.1.2)
2019
genodds : Generalised Odds Ratios (Version 1.1.2)
2019
geoFourierFDA : Ordinary Functional Kriging Using Fourier Smoothing and Gaussian Quadrature (Version 0.1.0)
2021
geoFKF : Kriging Method for Spatial Functional Data (Version 0.1.1)
2020
geocomplexity : Mitigating Spatial Bias Through Geographical Complexity (Version 0.2.0)
2024
geocmeans : Implementing Methods for Spatial Fuzzy Unsupervised Classification (Version 0.3.4)
2021
geodiv : Methods for Calculating Gradient Surface Metrics (Version 1.1.0)
2020
geogrid : Turn Geospatial Polygons into Regular or Hexagonal Grids (Version 0.1.2)
2018
geojsonR : A GeoJson Processing Toolkit (Version 1.1.1)
2017
geojsonsf : GeoJSON to Simple Feature Converter (Version 2.0.3)
2018
geomander : Geographic Tools for Studying Gerrymandering (Version 2.3.0)
2021
geometries : Convert Between R Objects and Geometric Structures (Version 0.2.4)
2020
geometry : Mesh Generation and Surface Tessellation (Version 0.5.0)
2005
geommc : Geometric Markov Chain Sampling (Version 0.1.1)
2024
geosphere : Spherical Trigonometry (Version 1.5-20)
2010
geostan : Bayesian Spatial Analysis (Version 0.7.0)
2022
gesso : Hierarchical GxE Interactions in a Regularized Regression Model (Version 1.0.2)
2021
gfiExtremes : Generalized Fiducial Inference for Extremes (Version 1.0.1)
2020
ggbrain : Create Images of Volumetric Brain Data in NIfTI Format Using 'ggplot2' Syntax (Version 0.8.1)
2022
ggdmc : Cognitive Models (Version 0.2.6.0)
2016
ggdist : Visualizations of Distributions and Uncertainty (Version 3.3.2)
2020
ggforce : Accelerating 'ggplot2' (Version 0.4.2)
2016
gghilbertstrings : A Fast 'ggplot2'-Based Implementation of Hilbert Curves (Version 0.3.3)
2021
ggip : Data Visualization for IP Addresses and Networks (Version 0.3.2)
2020
ggiraph : Make 'ggplot2' Graphics Interactive (Version 0.8.10)
2016
ggrepel : Automatically Position Non-Overlapping Text Labels with 'ggplot2' (Version 0.9.6)
2016
ggwordcloud : A Word Cloud Geom for 'ggplot2' (Version 0.6.2)
2018
ghcm : Functional Conditional Independence Testing with the GHCM (Version 3.0.1)
2021
gibasa : An Alternative 'Rcpp' Wrapper of 'MeCab' (Version 1.1.1)
2023
gif : Graphical Independence Filtering (Version 0.1.1)
2020
gigg : Group Inverse-Gamma Gamma Shrinkage for Sparse Regression with Grouping Structure (Version 0.2.1)
2021
giniVarCI : Gini Indices, Variances and Confidence Intervals for Finite and Infinite Populations (Version 0.0.1-3)
2024
gitear : Client to the 'gitea' API (Version 1.0.0)
2020
gjam : Generalized Joint Attribute Modeling (Version 2.6.2)
2016
gkmSVM : Gapped-Kmer Support Vector Machine (Version 0.83.0)
2015
glamlasso : Penalization in Large Scale Generalized Linear Array Models (Version 3.0.1)
2015
glca : An R Package for Multiple-Group Latent Class Analysis (Version 1.4.2)
2020
glcm : Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs) (Version 1.6.5)
2014
glm.deploy : 'C' and 'Java' Source Code Generator for Fitted Glm Objects (Version 1.0.4)
2018
glmmLasso : Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation (Version 1.6.3)
2011
glmmPen : High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) (Version 1.5.4.8)
2022
glmmfields : Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling (Version 0.1.8)
2018
glmmrBase : Generalised Linear Mixed Models in R (Version 0.10.5)
2022
glmmrOptim : Approximate Optimal Experimental Designs Using Generalised Linear Mixed Models (Version 0.3.5)
2023
glmnet : Lasso and Elastic-Net Regularized Generalized Linear Models (Version 4.1-8)
2008
glow : Make Plots that Glow (Version 0.13.0)
2020
gmtFD : General Multiple Tests for Univariate and Multivariate Functional Data (Version 0.1.0)
2024
gmvjoint : Joint Models of Survival and Multivariate Longitudinal Data (Version 0.4.5)
2022
gmwmx : Estimate Functional and Stochastic Parameters of Linear Models with Correlated Residuals (Version 1.0.3)
2022
goat : Gene Set Analysis Using the Gene Set Ordinal Association Test (Version 1.0)
2024
gofar : Generalized Co-Sparse Factor Regression (Version 0.1)
2022
goffda : Goodness-of-Fit Tests for Functional Data (Version 0.1.2)
2019
goldfish : Statistical Network Models for Dynamic Network Data (Version 1.6.10)
2022
googlePolylines : Encoding Coordinates into 'Google' Polylines (Version 0.8.5)
2018
gpcp : Genomic Prediction of Cross Performance (Version 0.1.0)
2024
gplite : General Purpose Gaussian Process Modelling (Version 0.13.0)
2021
gpuR : GPU Functions for R Objects (Version 2.0.6)
2015
grainscape : Landscape Connectivity, Habitat, and Protected Area Networks (Version 0.4.4)
2019
graphicalEvidence : Graphical Evidence (Version 1.1)
2024
graphicalVAR : Graphical VAR for Experience Sampling Data (Version 0.3.4)
2015
graphkernels : Graph Kernels (Version 1.6.1)
2017
graphlayouts : Additional Layout Algorithms for Network Visualizations (Version 1.2.0)
2019
graphql : A GraphQL Query Parser (Version 1.5.2)
2016
gravmagsubs : Gravitational and Magnetic Attraction of 3-D Vertical Rectangular Prisms (Version 1.0.1)
2023
greed : Clustering and Model Selection with the Integrated Classification Likelihood (Version 0.6.1)
2021
greeks : Sensitivities of Prices of Financial Options and Implied Volatilities (Version 1.4.3)
2021
greencrab.toolkit : Run 'Stan' Models to Interpret Green Crab Monitoring Assessments (Version 0.2)
2023
gretel : Generalized Path Analysis for Social Networks (Version 0.0.1)
2019
grf : Generalized Random Forests (Version 2.3.2)
2017
gridOT : Approximate Optimal Transport Between Two-Dimensional Grids (Version 1.0.1)
2022
gridtext : Improved Text Rendering Support for 'Grid' Graphics (Version 0.1.5)
2020
groupedSurv : Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function (Version 1.0.5.1)
2018
grove : Wavelet Functional ANOVA Through Markov Groves (Version 1.1.1)
2017
growfunctions : Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data (Version 0.16)
2014
grpCox : Penalized Cox Model for High-Dimensional Data with Grouped Predictors (Version 1.0.2)
2020
grpSLOPE : Group Sorted L1 Penalized Estimation (Version 0.3.3)
2016
grpsel : Group Subset Selection (Version 1.3.1)
2021
grwat : River Hydrograph Separation and Analysis (Version 0.0.4)
2022
gsDesign2 : Group Sequential Design with Non-Constant Effect (Version 1.1.2)
2023
gsEasy : Gene Set Enrichment Analysis in R (Version 1.5)
2016
gscounts : Group Sequential Designs with Negative Binomial Outcomes (Version 0.1-4)
2018
gsignal : Signal Processing (Version 0.3-7)
2021
gsisdecoder : High Efficient Functions to Decode NFL Player IDs (Version 0.0.1)
2020
gsynth : Generalized Synthetic Control Method (Version 1.2.1)
2017
gtfs2gps : Converting Transport Data from GTFS Format to GPS-Like Records (Version 2.1-2)
2020
gtfsrouter : Routing with 'GTFS' (General Transit Feed Specification) Data (Version 0.1.3)
2019
gwpcormapper : Geographically Weighted Partial Correlation Mapper (Version 0.1.3)
2021
gyro : Hyperbolic Geometry (Version 1.4.0)
2022
hBayesDM : Hierarchical Bayesian Modeling of Decision-Making Tasks (Version 1.2.1)
2016
habCluster : Detecting Spatial Clustering Based on Connection Cost Between Grids (Version 1.0.5)
2022
hahmmr : Haplotype-Aware Hidden Markov Model for RNA (Version 1.0.0)
2023
hal9001 : The Scalable Highly Adaptive Lasso (Version 0.4.6)
2020
handwriter : Handwriting Analysis in R (Version 3.2.1)
2021
hans : Haversines are not Slow (Version 0.1)
2019
harmony : Fast, Sensitive, and Accurate Integration of Single Cell Data (Version 1.2.1)
2021
hawkes : Hawkes process simulation and calibration toolkit (Version 0.0-4)
2014
hawkesbow : Estimation of Hawkes Processes from Binned Observations (Version 1.0.3)
2021
hbal : Hierarchically Regularized Entropy Balancing (Version 1.2.12)
2023
hbamr : Hierarchical Bayesian Aldrich-McKelvey Scaling via 'Stan' (Version 2.3.2)
2023
hclust1d : Hierarchical Clustering of Univariate (1d) Data (Version 0.1.1)
2023
hdbcp : Bayesian Change Point Detection for High-Dimensional Data (Version 0.1.0)
2024
hdbinseg : Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation (Version 1.0.2)
2018
hdbm : High Dimensional Bayesian Mediation Analysis (Version 0.9.0)
2019
hdflex : High-Dimensional Aggregate Density Forecasts (Version 0.3.0)
2023
hdme : High-Dimensional Regression with Measurement Error (Version 0.6.0)
2018
hdpGLM : Hierarchical Dirichlet Process Generalized Linear Models (Version 1.0.3)
2020
heatwaveR : Detect Heatwaves and Cold-Spells (Version 0.4.6)
2018
hermiter : Efficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions along with Quantiles (Univariate) and Nonparametric Correlation (Bivariate) (Version 2.3.1)
2020
hesim : Health Economic Simulation Modeling and Decision Analysis (Version 0.5.5)
2017
hetGP : Heteroskedastic Gaussian Process Modeling and Design under Replication (Version 1.1.7)
2017
heuristicsmineR : Discovery of Process Models with the Heuristics Miner (Version 0.3.0)
2019
hgwrr : Hierarchical and Geographically Weighted Regression (Version 0.6-0)
2022
hhsmm : Hidden Hybrid Markov/Semi-Markov Model Fitting (Version 0.4.2)
2021
hierarchicalSets : Set Data Visualization Using Hierarchies (Version 1.0.4)
2016
highfrequency : Tools for Highfrequency Data Analysis (Version 1.0.1)
2012
highs : 'HiGHS' Optimization Solver (Version 0.1-10)
2022
higlasso : Hierarchical Integrative Group LASSO (Version 0.9.0)
2020
hilbertSimilarity : Hilbert Similarity Index for High Dimensional Data (Version 0.4.3)
2019
hipread : Read Hierarchical Fixed Width Files (Version 0.2.4)
2018
historicalborrowlong : Longitudinal Bayesian Historical Borrowing Models (Version 0.1.0)
2022
hkevp : Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) (Version 1.1.5)
2016
hlt : Higher-Order Item Response Theory (Version 1.3.1)
2022
hmcdm : Hidden Markov Cognitive Diagnosis Models for Learning (Version 2.1.1)
2022
hommel : Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method (Version 1.6)
2017
hoopR : Access Men's Basketball Play by Play Data (Version 2.1.0)
2021
hopit : Hierarchical Ordered Probit Models with Application to Reporting Heterogeneity (Version 0.11.6)
2019
hpa : Distributions Hermite Polynomial Approximation (Version 1.3.3)
2019
hrqglas : Group Variable Selection for Quantile and Robust Mean Regression (Version 1.1.0)
2021
hrt : Heteroskedasticity Robust Testing (Version 1.0.1)
2021
hsphase : Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data (Version 2.0.3)
2013
hsrecombi : Estimation of Recombination Rate and Maternal LD in Half-Sibs (Version 1.0.1)
2020
hsstan : Hierarchical Shrinkage Stan Models for Biomarker Selection (Version 0.8.2)
2019
htetree : Causal Inference with Tree-Based Machine Learning Algorithms (Version 0.1.19)
2023
htsr : Hydro-Meteorology Time-Series (Version 2.1.6)
2020
httpuv : HTTP and WebSocket Server Library (Version 1.6.15)
2013
huge : High-Dimensional Undirected Graph Estimation (Version 1.3.5)
2010
humaniformat : A Parser for Human Names (Version 0.6.0)
2015
humanleague : Synthetic Population Generator (Version 2.3.2)
2017
hunspell : High-Performance Stemmer, Tokenizer, and Spell Checker (Version 3.0.5)
2016
hwep : Hardy-Weinberg Equilibrium in Polyploids (Version 2.0.2)
2021
hydrotoolbox : Hydrological Tools for Handling Hydro-Meteorological Data Records (Version 1.1.2)
2021
hyper2 : The Hyperdirichlet Distribution, Mark 2 (Version 3.1-0)
2017
hyperSpec : Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) (Version 0.100.2)
2009
hypergeo2 : Generalized Hypergeometric Function with Tunable High Precision (Version 0.2.0)
2024
hypervolume : High Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls (Version 3.1.4)
2013
hystar : Fit the Hysteretic Threshold Autoregressive Model (Version 1.0.0)
2023
iAR : Irregularly Observed Autoregressive Models (Version 1.2.0)
2021
iBST : Improper Bagging Survival Tree (Version 1.2)
2017
iCellR : Analyzing High-Throughput Single Cell Sequencing Data (Version 1.6.7)
2019
iDOVE : Durability of Vaccine Efficacy Against SARS-CoV-2 Infection (Version 1.5)
2021
iGraphMatch : Tools for Graph Matching (Version 2.0.5)
2021
iNEXT.3D : Interpolation and Extrapolation for Three Dimensions of Biodiversity (Version 1.0.6)
2024
iNEXT : Interpolation and Extrapolation for Species Diversity (Version 3.0.1)
2015
ibdsim2 : Simulation of Chromosomal Regions Shared by Family Members (Version 2.1.1)
2020
ibm : Individual Based Models in R (Version 0.3.0)
2016
ibmcraftr : Toolkits to Develop Individual-Based Models in Infectious Disease (Version 1.0.0)
2016
ibs : Integral of B-Spline Functions (Version 1.4)
2014
icRSF : A Modified Random Survival Forest Algorithm (Version 1.2)
2016
iccbeta : Multilevel Model Intraclass Correlation for Slope Heterogeneity (Version 1.2.0)
2014
icenReg : Regression Models for Interval Censored Data (Version 2.0.16)
2015
icensmis : Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes (Version 1.5.0)
2012
icmstate : Interval Censored Multi-State Models (Version 0.1.1)
2024
icosa : Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra (Version 0.11.1)
2017
icr : Compute Krippendorff's Alpha (Version 0.6.6)
2018
idefix : Efficient Designs for Discrete Choice Experiments (Version 1.0.3)
2017
idem : Inference in Randomized Controlled Trials with Death and Missingness (Version 5.2)
2016
igcop : Computational Tools for the IG and IGL Copula Families (Version 1.0.2)
2021
image.CannyEdges : Implementation of the Canny Edge Detector for Images (Version 0.1.1)
2020
image.ContourDetector : Implementation of the Unsupervised Smooth Contour Line Detection for Images (Version 0.1.1)
2020
image.CornerDetectionF9 : Find Corners in Digital Images with FAST-9 (Version 0.1.0)
2020
image.CornerDetectionHarris : Implementation of the Harris Corner Detection for Images (Version 0.1.2)
2020
image.LineSegmentDetector : Detect Line Segments in Images (Version 0.1.0)
2020
image.Otsu : Otsu's Image Segmentation Method (Version 0.1)
2020
image.binarization : Binarize Images for Enhancing Optical Character Recognition (Version 0.1.3)
2020
image.libfacedetection : Convolutional Neural Network for Face Detection (Version 0.1)
2020
image.textlinedetector : Segment Images in Text Lines and Words (Version 0.2.3)
2020
imager : Image Processing Library Based on 'CImg' (Version 1.0.2)
2015
imagerExtra : Extra Image Processing Library Based on 'imager' (Version 1.3.2)
2018
imagine : IMAGing engINEs, Tools for Application of Image Filters to Data Matrices (Version 2.1.1)
2016
imbalance : Preprocessing Algorithms for Imbalanced Datasets (Version 1.0.2.1)
2017
imbibe : A Pipe-Friendly Image Calculator (Version 0.1.1)
2020
immer : Item Response Models for Multiple Ratings (Version 1.5-13)
2015
immunarch : Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires (Version 0.9.1)
2020
imp4p : Imputation for Proteomics (Version 1.2)
2016
impactflu : Quantification of Population-Level Impact of Vaccination (Version 0.1.0)
2020
impactr : Mechanical Loading Prediction Through Accelerometer Data (Version 0.4.2)
2021
imptree : Classification Trees with Imprecise Probabilities (Version 0.5.1)
2018
imputeMulti : Imputation Methods for Multivariate Multinomial Data (Version 0.8.4)
2016
imputeTS : Time Series Missing Value Imputation (Version 3.3)
2015
imuf : Estimate Orientation of an Inertial Measurement Unit (Version 0.3.0)
2024
imt : Impact Measurement Toolkit (Version 1.0.0)
2024
inca : Integer Calibration (Version 0.0.4)
2016
incgraph : Incremental Graphlet Counting for Network Optimisation (Version 1.0.1)
2017
indelmiss : Insertion Deletion Analysis While Accounting for Possible Missing Data (Version 1.0.10)
2016
indexthis : Quick Indexation (Version 1.0.1)
2024
inferCSN : Inferring Cell-Specific Gene Regulatory Network (Version 1.0.8)
2023
inferr : Inferential Statistics (Version 0.3.1)
2017
infinitefactor : Bayesian Infinite Factor Models (Version 1.0)
2020
inline : Functions to Inline C, C++, Fortran Function Calls from R (Version 0.3.19)
2007
inplace : In-place Operators for R (Version 0.1.2)
2018
inspectdf : Inspection, Comparison and Visualisation of Data Frames (Version 0.0.12)
2019
insight : Easy Access to Model Information for Various Model Objects (Version 0.20.5)
2019
intRinsic : Likelihood-Based Intrinsic Dimension Estimators (Version 1.1.0)
2022
intcensROC : AUC Estimation of Interval Censored Survival Data (Version 0.1.3)
2018
interep : Interaction Analysis of Repeated Measure Data (Version 0.4.1)
2018
interflex : Multiplicative Interaction Models Diagnostics and Visualization (Version 1.2.6)
2017
interleave : Converts Tabular Data to Interleaved Vectors (Version 0.1.2)
2020
interp : Interpolation Methods (Version 1.1-6)
2017
interpolation : Interpolation of Bivariate Functions (Version 0.1.1)
2023
interpolators : Some Interpolation Methods (Version 1.0.1)
2023
intervalaverage : Time-Weighted Averaging for Interval Data (Version 0.8.0)
2020
intkrige : A Numerical Implementation of Interval-Valued Kriging (Version 1.0.1)
2019
intmap : Ordered Containers with Integer Keys (Version 1.0.0)
2023
intrinsicFRP : An R Package for Factor Model Asset Pricing (Version 2.1.0)
2023
intsurv : Integrative Survival Modeling (Version 0.2.2)
2019
invgamstochvol : Obtains the Log Likelihood for an Inverse Gamma Stochastic Volatility Model (Version 1.0.0)
2023
ionet : Network Analysis for Input-Output Tables (Version 0.2.2)
2024
iotarelr : Iota Inter Coder Reliability for Content Analysis (Version 0.1.5)
2022
ipaddress : Data Analysis for IP Addresses and Networks (Version 1.0.2)
2020
ipft : Indoor Positioning Fingerprinting Toolset (Version 0.7.2)
2017
ipmr : Integral Projection Models (Version 0.0.7)
2021
iprior : Regression Modelling using I-Priors (Version 0.7.4)
2016
ipsecr : Spatially Explicit Capture-Recapture by Inverse Prediction (Version 1.4.1)
2022
irt : Item Response Theory and Computerized Adaptive Testing Functions (Version 0.2.9)
2020
isodistrreg : Isotonic Distributional Regression (IDR) (Version 0.1.0)
2021
isotree : Isolation-Based Outlier Detection (Version 0.6.1-1)
2019
isotracer : Isotopic Tracer Analysis Using MCMC (Version 1.1.7)
2021
itp : The Interpolate, Truncate, Project (ITP) Root-Finding Algorithm (Version 1.2.1)
2022
ivdoctr : Ensures Mutually Consistent Beliefs When Using IVs (Version 1.0.1)
2020
ivsacim : Structural Additive Cumulative Intensity Models with IV (Version 2.1.0)
2020
ivtools : Instrumental Variables (Version 2.3.0)
2018
ivx : Robust Econometric Inference (Version 1.1.0)
2019
jSDM : Joint Species Distribution Models (Version 0.2.6)
2019
jaccard : Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients (Version 0.1.0)
2018
jackalope : A Swift, Versatile Phylogenomic and High-Throughput Sequencing Simulator (Version 1.1.5)
2019
jack : Jack, Zonal, Schur, and Other Symmetric Polynomials (Version 6.1.0)
2019
jacobi : Jacobi Theta Functions and Related Functions (Version 3.1.1)
2022
jfa : Statistical Methods for Auditing (Version 0.7.2)
2020
jiebaR : Chinese Text Segmentation (Version 0.11)
2014
jmatrix : Read from/Write to Disk Matrices with any Data Type in a Binary Format (Version 1.5.2)
2022
jmcm : Joint Mean-Covariance Models using 'Armadillo' and S4 (Version 0.2.4)
2015
jmotif : Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX (Version 1.1.1)
2015
jmvconnect : Connect to the 'jamovi' Statistical Spreadsheet (Version 2.5.7)
2018
joinXL : Perform Joins or Minus Queries on 'Excel' Files (Version 1.0.1)
2016
joineRML : Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes (Version 0.4.6)
2016
jrSiCKLSNMF : Multimodal Single-Cell Omics Dimensionality Reduction (Version 1.2.1)
2023
jsonStrings : Manipulation of JSON Strings (Version 2.1.1)
2021
jsonify : Convert Between 'R' Objects and Javascript Object Notation (JSON) (Version 1.2.2)
2018
jti : Junction Tree Inference (Version 0.8.4)
2020
junctions : The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages (Version 2.1.0)
2018
kalmanfilter : Kalman Filter (Version 2.1.1)
2022
kamila : Methods for Clustering Mixed-Type Data (Version 0.1.2)
2016
kanjistat : A Statistical Framework for the Analysis of Japanese Kanji Characters (Version 0.14.1)
2023
kbal : Kernel Balancing (Version 0.1.1)
2024
kcpRS : Kernel Change Point Detection on the Running Statistics (Version 1.1.1)
2019
kde1d : Univariate Kernel Density Estimation (Version 1.0.7)
2018
kdecopula : Kernel Smoothing for Bivariate Copula Densities (Version 0.9.2)
2015
kdevine : Multivariate Kernel Density Estimation with Vine Copulas (Version 0.4.5)
2017
kerSeg : New Kernel-Based Change-Point Detection (Version 1.1)
2022
kergp : Gaussian Process Laboratory (Version 0.5.7)
2015
kernelboot : Smoothed Bootstrap and Random Generation from Kernel Densities (Version 0.1.10)
2017
keyATM : Keyword Assisted Topic Models (Version 0.5.2)
2020
kgrams : Classical k-gram Language Models (Version 0.2.0)
2021
kimfilter : Kim Filter (Version 1.0.3)
2022
kissmig : a Keep It Simple Species Migration Model (Version 1.0-5)
2015
klsh : Blocking for Record Linkage (Version 0.1.0)
2020
kmBlock : k-Means Like Blockmodeling of One-Mode and Linked Networks (Version 0.1.2)
2023
kmeRtone : Multi-Purpose and Flexible k-Meric Enrichment Analysis Software (Version 1.0)
2024
kmer : Fast K-Mer Counting and Clustering for Biological Sequence Analysis (Version 1.1.2)
2018
knn.covertree : An Accurate kNN Implementation with Multiple Distance Measures (Version 1.0)
2019
kohonen : Supervised and Unsupervised Self-Organising Maps (Version 3.0.12)
2006
krige : Geospatial Kriging with Metropolis Sampling (Version 0.6.2)
2018
ksNN : K* Nearest Neighbors Algorithm (Version 0.1.2)
2019
ktaucenters : Robust Clustering Procedures (Version 1.0.0)
2019
kvh : Read/Write Files in Key-Value-Hierarchy Format (Version 1.4.2)
2017
l0ara : Sparse Generalized Linear Model with L0 Approximation for Feature Selection (Version 0.1.6)
2016
l1spectral : An L1-Version of the Spectral Clustering (Version 0.99.6)
2021
lacunr : Fast 3D Lacunarity for Voxel Data (Version 1.0.1)
2024
lamW : Lambert-W Function (Version 2.2.4)
2015
lamle : Maximum Likelihood Estimation of Latent Variable Models (Version 0.3.1)
2023
landscapeR : Categorical Landscape Simulation Facility (Version 1.3)
2016
landscapemetrics : Landscape Metrics for Categorical Map Patterns (Version 2.1.4)
2018
landsepi : Landscape Epidemiology and Evolution (Version 1.5.1)
2018
latentgraph : Graphical Models with Latent Variables (Version 1.1)
2020
later : Utilities for Scheduling Functions to Execute Later with Event Loops (Version 1.3.2)
2017
lavaSearch2 : Tools for Model Specification in the Latent Variable Framework (Version 2.0.3)
2018
lavacreg : Latent Variable Count Regression Models (Version 0.2-2)
2021
lazyarray : Persistent Large Data Array with Lazy-Loading on Demand (Version 1.1.0)
2020
lbfgs : Limited-memory BFGS Optimization (Version 1.2.1.2)
2014
lbfgsb3c : Limited Memory BFGS Minimizer with Bounds on Parameters with optim() 'C' Interface (Version 2024-3.5)
2018
lconnect : Simple Tools to Compute Landscape Connectivity Metrics (Version 0.1.2)
2019
lcopula : Liouville Copulas (Version 1.0.7)
2015
lddmm : Longitudinal Drift-Diffusion Mixed Models (LDDMM) (Version 0.4.2)
2021
ldsep : Linkage Disequilibrium Shrinkage Estimation for Polyploids (Version 2.1.5)
2020
ldsr : Linear Dynamical System Reconstruction (Version 0.0.2)
2020
ldt : Automated Uncertainty Analysis (Version 0.5.3)
2023
leafletZH : Adds a Chinese Choropleth Leaflet Map (Version 0.1.0)
2024
lefko3 : Historical and Ahistorical Population Projection Matrix Analysis (Version 6.3.1)
2020
legion : Forecasting Using Multivariate Models (Version 0.1.2)
2021
leidenAlg : Implements the Leiden Algorithm via an R Interface (Version 1.1.4)
2020
lessSEM : Non-Smooth Regularization for Structural Equation Models (Version 1.5.5)
2023
lexRankr : Extractive Summarization of Text with the LexRank Algorithm (Version 0.5.2)
2016
lfl : Linguistic Fuzzy Logic (Version 2.2.1)
2015
lfmm : Latent Factor Mixed Models (Version 1.1)
2020
lgpr : Longitudinal Gaussian Process Regression (Version 1.2.4)
2021
lhs : Latin Hypercube Samples (Version 1.2.0)
2006
libr : Libraries, Data Dictionaries, and a Data Step for R (Version 1.3.7)
2020
libstable4u : Stable Distribution Functions...For You (Version 1.0.4)
2023
lidR : Airborne LiDAR Data Manipulation and Visualization for Forestry Applications (Version 4.1.2)
2016
lifecontingencies : Financial and Actuarial Mathematics for Life Contingencies (Version 1.3.12)
2011
lime : Local Interpretable Model-Agnostic Explanations (Version 0.5.3)
2017
linconGaussR : Sampling Multivariate Normal Distribution under Linear Constraints (Version 0.1)
2021
linelistBayes : Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches (Version 1.0)
2024
lineup2 : Lining Up Two Sets of Measurements (Version 0.6)
2020
lingdist : Fast Linguistic Distance and Alignment Computation (Version 1.0)
2023
lingmatch : Linguistic Matching and Accommodation (Version 1.0.7)
2021
lit : Latent Interaction Testing for Genome-Wide Studies (Version 1.0.0)
2023
llbayesireg : The L-Logistic Bayesian Regression (Version 1.0.0)
2019
lm.br : Linear Model with Breakpoint (Version 2.9.8)
2013
lnmixsurv : Bayesian Mixture Log-Normal Survival Model (Version 3.1.6)
2024
locStra : Fast Implementation of (Local) Population Stratification Methods (Version 1.9)
2019
localScore : Package for Sequence Analysis by Local Score (Version 1.0.11)
2021
localboot : Local Bootstrap Methods for Various Networks (Version 0.9.2)
2023
lodr : Linear Model Fitting with LOD Covariates (Version 1.0)
2020
logKDE : Computing Log-Transformed Kernel Density Estimates for Positive Data (Version 0.3.2)
2018
lolog : Latent Order Logistic Graph Models (Version 1.3.1)
2018
longevity : Statistical Methods for the Analysis of Excess Lifetimes (Version 1.1.1)
2023
lowmemtkmeans : Low Memory Use Trimmed K-Means (Version 0.1.2)
2016
lowpassFilter : Lowpass Filtering (Version 1.0-2)
2020
lpcde : Boundary Adaptive Local Polynomial Conditional Density Estimator (Version 0.1.4)
2022
lpirfs : Local Projections Impulse Response Functions (Version 0.2.3)
2018
lrstat : Power and Sample Size Calculation for Non-Proportional Hazards and Beyond (Version 0.2.10)
2021
lsbclust : Least-Squares Bilinear Clustering for Three-Way Data (Version 1.1)
2015
lsirm12pl : Latent Space Item Response Model (Version 1.3.3)
2022
lslx : Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood or Least Squares (Version 0.6.11)
2017
ltsspca : Sparse Principal Component Based on Least Trimmed Squares (Version 0.1.0)
2019
luajr : 'LuaJIT' Scripting (Version 0.1.8)
2024
ludic : Linkage Using Diagnosis Codes (Version 0.2.0)
2016
lutz : Look Up Time Zones of Point Coordinates (Version 0.3.2)
2018
lvmcomp : Stochastic EM Algorithms for Latent Variable Models with a High-Dimensional Latent Space (Version 1.2)
2018
lwgeom : Bindings to Selected 'liblwgeom' Functions for Simple Features (Version 0.2-14)
2017
m2r : Interface to 'Macaulay2' (Version 1.0.2)
2017
mDAG : Inferring Causal Network from Mixed Observational Data Using a Directed Acyclic Graph (Version 1.2.2)
2019
mHMMbayes : Multilevel Hidden Markov Models Using Bayesian Estimation (Version 1.1.0)
2019
magi : MAnifold-Constrained Gaussian Process Inference (Version 1.2.4)
2021
magick : Advanced Graphics and Image-Processing in R (Version 2.8.5)
2016
malan : MAle Lineage ANalysis (Version 1.0.3)
2020
manifold : Operations for Riemannian Manifolds (Version 0.1.1)
2022
maotai : Tools for Matrix Algebra, Optimization and Inference (Version 0.2.5)
2019
mapdeck : Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl' (Version 0.3.5)
2018
mapfit : PH/MAP Parameter Estimation (Version 1.0.0)
2015
mapi : Mapping Averaged Pairwise Information (Version 1.0.5)
2018
mappoly : Genetic Linkage Maps in Autopolyploids (Version 0.4.1)
2020
mapscanner : Print Maps, Draw on Them, Scan Them Back in (Version 0.1.1)
2021
maq : Multi-Armed Qini (Version 0.4.0)
2023
marble : Robust Marginal Bayesian Variable Selection for Gene-Environment Interactions (Version 0.0.3)
2023
marginaleffects : Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis Tests (Version 0.23.0)
2021
marked : Mark-Recapture Analysis for Survival and Abundance Estimation (Version 1.2.8)
2013
markerpen : Marker Gene Detection via Penalized Principal Component Analysis (Version 0.1.1)
2021
markets : Estimation Methods for Markets in Equilibrium and Disequilibrium (Version 1.1.5)
2022
markophylo : Markov Chain Models for Phylogenetic Trees (Version 1.0.9)
2015
markovchain : Easy Handling Discrete Time Markov Chains (Version 0.9.5)
2013
markovmix : Mixture of Markov Chains with Support of Higher Orders and Multiple Sequences (Version 0.1.3)
2023
mas : Marker Association Studies (Version 0.3)
2022
mase : Model-Assisted Survey Estimators (Version 0.1.5.2)
2018
mashr : Multivariate Adaptive Shrinkage (Version 0.2.79)
2020
mastif : Mast Inference and Forecasting (Version 2.3)
2019
matchingMarkets : Analysis of Stable Matchings (Version 1.0-4)
2014
matchingR : Matching Algorithms in R and C++ (Version 1.3.3)
2015
mateable : Assess Mating Potential in Space and Time (Version 0.3.2)
2016
matricks : Useful Tricks for Matrix Manipulation (Version 0.8.2)
2020
matrixdist : Statistics for Matrix Distributions (Version 1.1.9)
2021
matrixprofiler : Matrix Profile for R (Version 0.1.9)
2021
matrixset : Creating, Manipulating and Annotating Matrix Ensemble (Version 0.3.0)
2023
mbbefd : Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling (Version 0.8.12)
2013
mccca : Visualizing Class Specific Heterogeneous Tendencies in Categorical Data (Version 1.1.0.1)
2022
mcemGLM : Maximum Likelihood Estimation for Generalized Linear Mixed Models (Version 1.1.3)
2015
mcga : Machine Coded Genetic Algorithms for Real-Valued Optimization Problems (Version 3.0.7)
2010
mclm : Mastering Corpus Linguistics Methods (Version 0.2.7)
2022
mclustcomp : Measures for Comparing Clusters (Version 0.3.3)
2017
mclustAddons : Addons for the 'mclust' Package (Version 0.9)
2021
mcmcsae : Markov Chain Monte Carlo Small Area Estimation (Version 0.7.7)
2020
mcmcse : Monte Carlo Standard Errors for MCMC (Version 1.5-0)
2012
md4r : Markdown Parser Implemented using the 'MD4C' Library (Version 0.5.2.0)
2024
mdendro : Extended Agglomerative Hierarchical Clustering (Version 2.2.1)
2018
mdgc : Missing Data Imputation Using Gaussian Copulas (Version 0.1.7)
2021
mdmb : Model Based Treatment of Missing Data (Version 1.9-22)
2017
measr : Bayesian Psychometric Measurement Using 'Stan' (Version 1.0.0)
2023
medfate : Mediterranean Forest Simulation (Version 4.7.0)
2016
medfateland : Mediterranean Landscape Simulation (Version 2.4.7)
2024
melt : Multiple Empirical Likelihood Tests (Version 1.11.4)
2021
meltt : Matching Event Data by Location, Time and Type (Version 0.4.3)
2017
mergeTrees : Aggregating Trees (Version 0.1.3)
2019
meshed : Bayesian Regression with Meshed Gaussian Processes (Version 0.2.3)
2021
metaBMA : Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis (Version 0.6.9)
2017
metaRange : Framework to Build Mechanistic and Metabolic Constrained Species Distribution Models (Version 1.1.4)
2023
metacart : Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis (Version 2.0-3)
2017
metadynminer : Tools to Read, Analyze and Visualize Metadynamics HILLS Files from 'Plumed' (Version 0.1.7)
2018
metadynminer3d : Tools to Read, Analyze and Visualize Metadynamics 3D HILLS Files from 'Plumed' (Version 0.0.2)
2019
metafolio : Metapopulation Simulations for Conserving Salmon Through Portfolio Optimization (Version 0.1.2)
2014
metapack : Bayesian Meta-Analysis and Network Meta-Analysis (Version 0.3)
2021
meteoland : Landscape Meteorology Tools (Version 2.2.2)
2016
meteor : Meteorological Data Manipulation (Version 0.4-5)
2019
meteorits : Mixture-of-Experts Modeling for Complex Non-Normal Distributions (Version 0.1.1)
2019
mets : Analysis of Multivariate Event Times (Version 1.3.4)
2012
mev : Modelling of Extreme Values (Version 1.17)
2015
mfGARCH : Mixed-Frequency GARCH Models (Version 0.2.1)
2018
mgss : A Matrix-Free Multigrid Preconditioner for Spline Smoothing (Version 1.2)
2021
mhazard : Nonparametric and Semiparametric Methods for Multivariate Failure Time Data (Version 0.2.3)
2020
mgwrsar : GWR and MGWR with Spatial Autocorrelation (Version 1.0.5)
2018
miRNAss : Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples (Version 1.5)
2017
mice : Multivariate Imputation by Chained Equations (Version 3.16.0)
2006
miceFast : Fast Imputations Using 'Rcpp' and 'Armadillo' (Version 0.8.2)
2018
miceadds : Some Additional Multiple Imputation Functions, Especially for 'mice' (Version 3.17-44)
2014
microclass : Methods for Taxonomic Classification of Prokaryotes (Version 1.2)
2016
microseq : Basic Biological Sequence Handling (Version 2.1.6)
2016
microsimulation : Discrete Event Simulation in R and C++, with Tools for Cost-Effectiveness Analysis (Version 1.4.4)
2021
mig : Multivariate Inverse Gaussian Distribution (Version 1.0)
2024
miic : Learning Causal or Non-Causal Graphical Models Using Information Theory (Version 2.0.3)
2017
milorGWAS : Mixed Logistic Regression for Genome-Wide Analysis Studies (GWAS) (Version 0.7)
2020
milr : Multiple-Instance Logistic Regression with LASSO Penalty (Version 0.3.1)
2016
minMSE : Implementation of the minMSE Treatment Assignment Method for One or Multiple Treatment Groups (Version 0.5.1)
2019
mined : Minimum Energy Designs (Version 1.0-3)
2018
minerva : Maximal Information-Based Nonparametric Exploration for Variable Analysis (Version 1.5.10)
2012
miniLNM : Miniature Logistic-Normal Multinomial Models (Version 0.1.0)
2024
miniPCH : Survival Distributions with Piece-Wise Constant Hazards (Version 0.4.0)
2023
minic : Minimization Methods for Ill-Conditioned Problems (Version 1.0.1)
2024
minqa : Derivative-Free Optimization Algorithms by Quadratic Approximation (Version 1.2.8)
2010
mirt : Multidimensional Item Response Theory (Version 1.42)
2011
mirtCAT : Computerized Adaptive Testing with Multidimensional Item Response Theory (Version 1.14)
2014
mirtjml : Joint Maximum Likelihood Estimation for High-Dimensional Item Factor Analysis (Version 1.4.0)
2018
miscset : Miscellaneous Tools Set (Version 1.1.0)
2014
missDeaths : Simulating and Analyzing Time to Event Data in the Presence of Population Mortality (Version 2.8)
2015
missSBM : Handling Missing Data in Stochastic Block Models (Version 1.0.4)
2019
missSOM : Self-Organizing Maps with Built-in Missing Data Imputation (Version 1.0.1)
2021
missoNet : Missingness in Multi-Task Regression with Network Estimation (Version 1.2.0)
2022
mistral : Methods in Structural Reliability (Version 2.2.2)
2013
mixR : Finite Mixture Modeling for Raw and Binned Data (Version 0.2.1)
2017
mixdir : Cluster High Dimensional Categorical Datasets (Version 0.3.0)
2018
mixedBayes : Bayesian Longitudinal Regularized Quantile Mixed Model (Version 0.1.3)
2023
mixedCCA : Sparse Canonical Correlation Analysis for High-Dimensional Mixed Data (Version 1.6.2)
2020
mixedMem : Tools for Discrete Multivariate Mixed Membership Models (Version 1.1.2)
2015
mixl : Simulated Maximum Likelihood Estimation of Mixed Logit Models for Large Datasets (Version 1.3.4)
2019
mixsqp : Sequential Quadratic Programming for Fast Maximum-Likelihood Estimation of Mixture Proportions (Version 0.3-54)
2018
mixture : Mixture Models for Clustering and Classification (Version 2.1.1)
2013
mixvlmc : Variable Length Markov Chains with Covariates (Version 0.2.1)
2023
mizer : Dynamic Multi-Species Size Spectrum Modelling (Version 2.5.3)
2013
mkde : 2D and 3D Movement-Based Kernel Density Estimates (MKDEs) (Version 0.3)
2014
mlmc : Multi-Level Monte Carlo (Version 2.1.0)
2016
mlpack : 'Rcpp' Integration for the 'mlpack' Library (Version 4.5.0)
2020
mlrv : Long-Run Variance Estimation in Time Series Regression (Version 0.1.2)
2023
mlsbm : Efficient Estimation of Bayesian SBMs & MLSBMs (Version 0.99.2)
2021
mlts : Multilevel Latent Time Series Models with 'R' and 'Stan' (Version 1.0.0)
2024
mlxR : Simulation of Longitudinal Data (Version 4.2.0)
2015
mmand : Mathematical Morphology in Any Number of Dimensions (Version 1.6.3)
2012
mmapcharr : Memory-Map Character Files (Version 0.3.0)
2017
mmcif : Mixed Multivariate Cumulative Incidence Functions (Version 0.1.1)
2022
mmconvert : Mouse Map Converter (Version 0.10)
2023
mmpca : Integrative Analysis of Several Related Data Matrices (Version 2.0.3)
2019
mmsample : Multivariate Matched Sampling (Version 0.1)
2018
mmrm : Mixed Models for Repeated Measures (Version 0.3.14)
2022
mnis : Easy Downloading Capabilities for the Members' Name Information Service (Version 0.3.1)
2016
mniw : The Matrix-Normal Inverse-Wishart Distribution (Version 1.0.2)
2019
mnorm : Multivariate Normal Distribution (Version 1.2.2)
2022
mobsim : Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes (Version 0.3.1)
2017
modeLLtest : Compare Models with Cross-Validated Log-Likelihood (Version 1.0.4)
2019
modesto : Modeling and Analysis of Stochastic Systems (Version 0.1.4)
2018
modsem : Latent Interaction (and Moderation) Analysis in Structural Equation Models (SEM) (Version 1.0.3)
2024
mokken : Conducts Mokken Scale Analysis (Version 3.1.2)
2007
mombf : Model Selection with Bayesian Methods and Information Criteria (Version 3.5.4)
2008
momentuHMM : Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models (Version 1.5.5)
2017
monolix2rx : Converts 'Monolix' Models to 'rxode2' (Version 0.0.3)
2024
mop : Mobility Oriented-Parity Metric (Version 0.1.2)
2023
mosum : Moving Sum Based Procedures for Changes in the Mean (Version 1.2.7)
2018
motif : Local Pattern Analysis (Version 0.6.4)
2021
motmot : Models of Trait Macroevolution on Trees (Version 2.1.3)
2012
mousetrap : Process and Analyze Mouse-Tracking Data (Version 3.2.3)
2016
move : Visualizing and Analyzing Animal Track Data (Version 4.2.5)
2012
moveHMM : Animal Movement Modelling using Hidden Markov Models (Version 1.9)
2015
moveWindSpeed : Estimate Wind Speeds from Bird Trajectories (Version 0.2.4)
2016
mp : Multidimensional Projection Techniques (Version 0.4.1)
2014
mrMLM.GUI : Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study with Graphical User Interface (Version 4.0.2)
2018
mrMLM : Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS (Version 5.0.1)
2016
mrbayes : Bayesian Summary Data Models for Mendelian Randomization Studies (Version 0.5.2)
2019
mrbsizeR : Scale Space Multiresolution Analysis of Random Signals (Version 1.3)
2017
mrf2d : Markov Random Field Models for Image Analysis (Version 1.0)
2019
mrfDepth : Depth Measures in Multivariate, Regression and Functional Settings (Version 1.0.17)
2017
mrfse : Markov Random Field Structure Estimator (Version 0.4.2)
2019
mrgsolve : Simulate from ODE-Based Models (Version 1.5.2)
2017
mrregression : Regression Analysis for Very Large Data Sets via Merge and Reduce (Version 1.0.0)
2020
msce : Hazard of Multi-Stage Clonal Expansion Models (Version 1.0.1)
2020
msde : Bayesian Inference for Multivariate Stochastic Differential Equations (Version 1.0.5)
2017
msentropy : Spectral Entropy for Mass Spectrometry Data (Version 0.1.4)
2023
mssearchr : Library Search Against Electron Ionization Mass Spectral Databases (Version 0.1.1)
2024
mtdesign : Mander and Thompson Designs (Version 0.1.2)
2022
mulea : Enrichment Analysis using Multiple Ontologies and False Discovery Rate (Version 1.1.0)
2024
multbxxc : Auxiliary Routines for Influx Software (Version 1.0.3)
2019
multgee : GEE Solver for Correlated Nominal or Ordinal Multinomial Responses (Version 1.9.0)
2012
multibridge : Evaluating Multinomial Order Restrictions with Bridge Sampling (Version 1.2.0)
2021
multicool : Permutations of Multisets in Cool-Lex Order (Version 1.0.1)
2011
multiblock : Multiblock Data Fusion in Statistics and Machine Learning (Version 0.8.8.2)
2021
multilevLCA : Estimates and Plots Single-Level and Multilevel Latent Class Models (Version 1.5.2)
2023
multilink : Multifile Record Linkage and Duplicate Detection (Version 0.1.1)
2023
multinet : Analysis and mining of multilayer social networks (Version 4.2.1)
2017
multinets : Multilevel Networks Analysis (Version 0.2.2)
2017
multinomialLogitMix : Clustering Multinomial Count Data under the Presence of Covariates (Version 1.1)
2022
multinma : Bayesian Network Meta-Analysis of Individual and Aggregate Data (Version 0.7.2)
2020
multinomineq : Bayesian Inference for Multinomial Models with Inequality Constraints (Version 0.2.6)
2019
multipleDL : Addressing Detection Limits by Cumulative Probability Models (CPMs) (Version 1.0.0)
2023
multivar : Penalized Estimation of Multiple-Subject Vector Autoregressive (multi-VAR) Models (Version 1.1.0)
2020
multivariance : Measuring Multivariate Dependence Using Distance Multivariance (Version 2.4.1)
2017
multiview : Cooperative Learning for Multi-View Analysis (Version 0.8)
2022
mvMAPIT : Multivariate Genome Wide Marginal Epistasis Test (Version 2.0.3)
2022
mvabund : Statistical Methods for Analysing Multivariate Abundance Data (Version 4.2.1)
2010
mvgam : Multivariate (Dynamic) Generalized Additive Models (Version 1.1.3)
2024
mvnfast : Fast Multivariate Normal and Student's t Methods (Version 0.2.8)
2014
mvnimpute : Simultaneously Impute the Missing and Censored Values (Version 1.0.1)
2022
mvp : Fast Symbolic Multivariate Polynomials (Version 1.0-14)
2018
mvrsquared : Compute the Coefficient of Determination for Vector or Matrix Outcomes (Version 0.1.5)
2020
mwcsr : Solvers for Maximum Weight Connected Subgraph Problem and Its Variants (Version 0.1.9)
2021
mxsem : Specify 'OpenMx' Models with a 'lavaan'-Style Syntax (Version 0.1.0)
2023
n1qn1 : Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS Optimization (Version 6.0.1-12)
2017
nabor : Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions (Version 0.5.0)
2014
nametagger : Named Entity Recognition in Texts using 'NameTag' (Version 0.1.3)
2020
nandb : Number and Brightness Image Analysis (Version 2.1.0)
2017
narray : Subset- And Name-Aware Array Utility Functions (Version 0.5.1)
2016
natcpp : Fast C++ Primitives for the 'NeuroAnatomy Toolbox' (Version 0.1.0)
2021
navigation : Analyze the Impact of Sensor Error Modelling on Navigation Performance (Version 0.0.1)
2023
nbfar : Negative Binomial Factor Regression Models ('nbfar') (Version 0.1)
2022
nbody : Gravitational N-Body Simulation (Version 1.41)
2022
ncpen : Unified Algorithm for Non-convex Penalized Estimation for Generalized Linear Models (Version 1.0.0)
2018
ndjson : Wicked-Fast Streaming 'JSON' ('ndjson') Reader (Version 0.9.0)
2016
ndl : Naive Discriminative Learning (Version 0.2.18)
2011
neatRanges : Tidy Up Date/Time Ranges (Version 0.1.4)
2019
nebula : Negative Binomial Mixed Models Using Large-Sample Approximation for Differential Expression Analysis of ScRNA-Seq Data (Version 1.5.3)
2022
netClust : Model-Based Clustering of Network Data (Version 1.0.1)
2020
netUtils : A Collection of Tools for Network Analysis (Version 0.8.3)
2022
netcmc : Spatio-Network Generalised Linear Mixed Models for Areal Unit and Network Data (Version 1.0.2)
2022
netcontrol : Control Theory Methods for Networks (Version 0.1)
2020
netdiffuseR : Analysis of Diffusion and Contagion Processes on Networks (Version 1.22.6)
2016
netgsa : Network-Based Gene Set Analysis (Version 4.0.5)
2014
netrankr : Analyzing Partial Rankings in Networks (Version 1.2.3)
2018
nett : Network Analysis and Community Detection (Version 1.0.0)
2022
networkR : Network Analysis and Visualization (Version 0.1.2)
2018
networkscaleup : Network Scale-Up Models for Aggregated Relational Data (Version 0.1-2)
2022
neuroim : Data Structures and Handling for Neuroimaging Data (Version 0.0.6)
2014
nevada : Network-Valued Data Analysis (Version 0.2.0)
2021
nftbart : Nonparametric Failure Time Bayesian Additive Regression Trees (Version 2.1)
2021
ngspatial : Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data (Version 1.2-2)
2012
nhppp : Simulating Nonhomogeneous Poisson Point Processes (Version 1.0.0)
2024
niaidMI : Markov Model Multiple Imputation for NIAID OS (Version 1.1.0)
2021
nlmeVPC : Visual Model Checking for Nonlinear Mixed Effect Model (Version 2.6)
2021
nlmixr2est : Nonlinear Mixed Effects Models in Population PK/PD, Estimation Routines (Version 3.0.1)
2022
nlmixr2extra : Nonlinear Mixed Effects Models in Population PK/PD, Extra Support Functions (Version 3.0.1)
2022
nlmm : Generalized Laplace Mixed-Effects Models (Version 1.1.0)
2020
nmixgof : Goodness of Fit Checks for Binomial N-Mixture Models (Version 0.1.0)
2018
nmslibR : Non Metric Space (Approximate) Library (Version 1.0.7)
2018
nn2poly : Neural Network Weights Transformation into Polynomial Coefficients (Version 0.1.1)
2024
nnlib2Rcpp : A Tool for Creating Custom Neural Networks in C++ and using Them in R (Version 0.2.9)
2020
nodeSub : Simulate DNA Alignments Using Node Substitutions (Version 1.2.8)
2021
noisysbmGGM : Noisy Stochastic Block Model for GGM Inference (Version 0.1.2.3)
2024
nomclust : Hierarchical Cluster Analysis of Nominal Data (Version 2.8.0)
2015
noncompliance : Causal Inference in the Presence of Treatment Noncompliance Under the Binary Instrumental Variable Model (Version 0.2.2)
2016
nonlinearTseries : Nonlinear Time Series Analysis (Version 0.3.1)
2013
nonmem2rx : 'nonmem2rx' Converts 'NONMEM' Models to 'rxode2' (Version 0.1.5)
2023
nonneg.cg : Non-Negative Conjugate-Gradient Minimizer (Version 0.1.6-1)
2019
nonprobsvy : Inference Based on Non-Probability Samples (Version 0.1.0)
2024
nprobust : Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation (Version 0.4.0)
2016
nse : Numerical Standard Errors Computation in R (Version 1.21)
2017
nuggets : Extensible Data Pattern Searching Framework (Version 1.2.0)
2023
numberofalleles : Compute the Probability Distribution of the Number of Alleles in a DNA Mixture (Version 1.0.1)
2022
numbat : Haplotype-Aware CNV Analysis from scRNA-Seq (Version 1.4.2)
2022
o2geosocial : Reconstruction of Transmission Chains from Surveillance Data (Version 1.1.3)
2020
o2plsda : Multiomics Data Integration (Version 0.0.25)
2021
obliqueRSF : Oblique Random Forests for Right-Censored Time-to-Event Data (Version 0.1.2)
2018
oce : Analysis of Oceanographic Data (Version 1.8-3)
2007
ocf : Ordered Correlation Forest (Version 1.0.1)
2023
odbc : Connect to ODBC Compatible Databases (using the DBI Interface) (Version 1.5.0)
2017
oddsapiR : Access Live Sports Odds from the Odds API (Version 0.0.3)
2022
oeli : Utilities for Developing Data Science Software (Version 0.7.0)
2023
oem : Orthogonalizing EM: Penalized Regression for Big Tall Data (Version 2.0.12)
2012
offlineChange : Detect Multiple Change Points from Time Series (Version 0.0.4)
2019
ohenery : Modeling of Ordinal Random Variables via Softmax Regression (Version 0.1.2)
2019
ohoegdm : Ordinal Higher-Order Exploratory General Diagnostic Model for Polytomous Data (Version 0.1.0)
2022
olctools : Open Location Code Handling in R (Version 0.3.0)
2015
oncomsm : Bayesian Multi-State Models for Early Oncology (Version 0.1.4)
2022
ondisc : Fast, Universal, and Intuitive Computing on Large-Scale Single-Cell Data (Version 1.0.0)
2021
oneclust : Maximum Homogeneity Clustering for Univariate Data (Version 0.3.0)
2020
onemap : Construction of Genetic Maps in Experimental Crosses (Version 3.0.0)
2008
onlinePCA : Online Principal Component Analysis (Version 1.3.2)
2014
onlineforecast : Forecast Modelling for Online Applications (Version 1.0.2)
2020
ontologySimilarity : Calculating Ontological Similarities (Version 2.7)
2016
opa : An Implementation of Ordinal Pattern Analysis (Version 0.8.3)
2022
openCR : Open Population Capture-Recapture (Version 2.2.7)
2018
openair : Tools for the Analysis of Air Pollution Data (Version 2.18-2)
2010
opencv : Bindings to 'OpenCV' Computer Vision Library (Version 0.4.1)
2019
openxlsx : Read, Write and Edit xlsx Files (Version 4.2.7.1)
2014
openxlsx2 : Read, Write and Edit 'xlsx' Files (Version 1.10)
2022
opera : Online Prediction by Expert Aggregation (Version 1.2.0)
2016
optiSolve : Linear, Quadratic, and Rational Optimization (Version 1.0)
2017
optiSel : Optimum Contribution Selection and Population Genetics (Version 2.0.9)
2016
optimization : Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints (Version 1.0-9)
2016
optmatch : Functions for Optimal Matching (Version 0.10.8)
2005
opusminer : OPUS Miner Algorithm for Filtered Top-k Association Discovery (Version 0.1-1)
2017
ordinalForest : Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables (Version 2.4-4)
2017
orf : Ordered Random Forests (Version 0.1.4)
2019
orthoDr : Semi-Parametric Dimension Reduction Models Using Orthogonality Constrained Optimization (Version 0.6.8)
2017
osmdata : Import 'OpenStreetMap' Data as Simple Features or Spatial Objects (Version 0.2.5)
2017
osqp : Quadratic Programming Solver using the 'OSQP' Library (Version 0.6.3.3)
2018
outbreaker2 : Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data (Version 1.1.3)
2017
outliertree : Explainable Outlier Detection Through Decision Tree Conditioning (Version 1.10.0)
2019
pARI : Permutation-Based All-Resolutions Inference (Version 1.1.2)
2021
pGPx : Pseudo-Realizations for Gaussian Process Excursions (Version 0.1.4)
2018
pMEM : Predictive Moran's Eigenvector Maps (Version 0.1-1)
2024
pPCA : Partial Principal Component Analysis of Partitioned Large Sparse Matrices (Version 1.1)
2024
pROC : Display and Analyze ROC Curves (Version 1.18.5)
2010
packcircles : Circle Packing (Version 0.3.6)
2015
pacotest : Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas (Version 0.4.2)
2017
padr : Quickly Get Datetime Data Ready for Analysis (Version 0.6.2)
2017
pagoda2 : Single Cell Analysis and Differential Expression (Version 1.0.12)
2021
palm : Fitting Point Process Models via the Palm Likelihood (Version 1.1.5)
2017
pander : An R 'Pandoc' Writer (Version 0.6.5)
2012
parTimeROC : Parametric Time-Dependent Receiver Operating Characteristic (Version 0.1.0)
2024
parallelDist : Parallel Distance Matrix Computation using Multiple Threads (Version 0.2.6)
2017
parallelpam : Parallel Partitioning-Around-Medoids (PAM) for Big Sets of Data (Version 1.4.3)
2022
parglm : Parallel GLM (Version 0.1.7)
2018
paropt : Parameter Optimizing of ODE-Systems (Version 0.3.3)
2020
parsermd : Formal Parser and Related Tools for R Markdown Documents (Version 0.1.3)
2021
partition : Agglomerative Partitioning Framework for Dimension Reduction (Version 0.2.2)
2019
parzer : Parse Messy Geographic Coordinates (Version 0.4.1)
2020
patentr : Access USPTO Bulk Data in Tidy Rectangular Format (Version 0.1.4)
2021
patternplot : Versatile Pie Charts, Ring Charts, Bar Charts and Box Plots using Patterns, Colors and Images (Version 1.0.0)
2016
paws.common : Paws Low-Level Amazon Web Services API (Version 0.7.7)
2019
pbv : Probabilities for Bivariate Normal Distribution (Version 0.5-47)
2018
pcIRT : IRT Models for Polytomous and Continuous Item Responses (Version 0.2.4)
2014
pcFactorStan : Stan Models for the Paired Comparison Factor Model (Version 1.5.4)
2019
pcadapt : Fast Principal Component Analysis for Outlier Detection (Version 4.4.0)
2015
pcalg : Methods for Graphical Models and Causal Inference (Version 2.7-12)
2006
pcaone : Fast and Accurate Randomized Singular Value Decomposition Algorithms with 'PCAone' (Version 1.1.0)
2022
pccc : Pediatric Complex Chronic Conditions (Version 1.0.5)
2017
pdSpecEst : An Analysis Toolbox for Hermitian Positive Definite Matrices (Version 1.2.4)
2017
pda : Privacy-Preserving Distributed Algorithms (Version 1.2.7)
2020
pdftools : Text Extraction, Rendering and Converting of PDF Documents (Version 3.4.1)
2016
pecora : Permutation Conditional Random Tests (Version 0.1.1)
2021
pedbp : Pediatric Blood Pressure (Version 2.0.1)
2022
pedometrics : Miscellaneous Pedometric Tools (Version 0.12.1)
2014
pema : Penalized Meta-Analysis (Version 0.1.3)
2021
pemultinom : L1-Penalized Multinomial Regression with Statistical Inference (Version 0.1.0)
2023
pems.utils : Portable Emissions (and Other Mobile) Measurement System Utilities (Version 0.2.29.1)
2016
penAFT : Fit the Regularized Gehan Estimator with Elastic Net and Sparse Group Lasso Penalties (Version 0.3.0)
2022
penMSM : Estimating Regularized Multi-state Models Using L1 Penalties (Version 0.99)
2014
penPHcure : Variable Selection in PH Cure Model with Time-Varying Covariates (Version 1.0.2)
2019
penalized : L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model (Version 0.9-52)
2007
penppml : Penalized Poisson Pseudo Maximum Likelihood Regression (Version 0.2.3)
2021
pense : Penalized Elastic Net S/MM-Estimator of Regression (Version 2.2.2)
2017
peppm : Piecewise Exponential Distribution with Random Time Grids (Version 0.0.1)
2020
permuco : Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals (Version 1.1.3)
2018
personalized2part : Two-Part Estimation of Treatment Rules for Semi-Continuous Data (Version 0.0.1)
2020
pfr : Interface to the 'C++' Library 'Pf' (Version 1.0.1)
2023
pg : Polya Gamma Distribution Sampler (Version 0.2.4)
2023
pgKDEsphere : Parametrically Guided Kernel Density Estimator for Spherical Data (Version 1.0.1)
2024
pgdraw : Generate Random Samples from the Polya-Gamma Distribution (Version 1.1)
2018
pgee.mixed : Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes (Version 0.1.0)
2016
pgenlibr : PLINK 2 Binary (.pgen) Reader (Version 0.3.7)
2023
pgsc : Computes Powell's Generalized Synthetic Control Estimator (Version 1.0.0)
2018
ph2bayes : Bayesian Single-Arm Phase II Designs (Version 0.0.2)
2016
ph2bye : Phase II Clinical Trial Design Using Bayesian Methods (Version 0.1.4)
2016
phacking : Sensitivity Analysis for p-Hacking in Meta-Analyses (Version 0.2.1)
2022
phangorn : Phylogenetic Reconstruction and Analysis (Version 2.12.1)
2008
phenofit : Extract Remote Sensing Vegetation Phenology (Version 0.3.9)
2019
philentropy : Similarity and Distance Quantification Between Probability Functions (Version 0.8.0)
2017
phonics : Phonetic Spelling Algorithms (Version 1.3.10)
2015
phylobase : Base Package for Phylogenetic Structures and Comparative Data (Version 0.8.12)
2009
phylopairs : Comparative Analyses of Lineage-Pair Traits (Version 0.1.0)
2024
phylosignal : Exploring the Phylogenetic Signal in Continuous Traits (Version 1.3.1)
2015
phylotypr : Classifying DNA Sequences to Taxonomic Groupings (Version 0.1.0)
2024
phyr : Model Based Phylogenetic Analysis (Version 1.1.0)
2019
pimeta : Prediction Intervals for Random-Effects Meta-Analysis (Version 1.1.3)
2018
piqp : R Interface to Proximal Interior Point Quadratic Programming Solver (Version 0.2.2)
2023
piton : Parsing Expression Grammars in Rcpp (Version 1.0.0)
2017
pkgbuild : Find Tools Needed to Build R Packages (Version 1.4.5)
2018
pkgload : Simulate Package Installation and Attach (Version 1.4.0)
2018
plac : A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data (Version 0.1.3)
2016
pleiotest : Fast Sequential Pleiotropy Test (Version 1.0.0)
2021
pliman : Tools for Plant Image Analysis (Version 3.0.0)
2021
plogr : The 'plog' C++ Logging Library (Version 0.2.0)
2016
plotHMM : Plot Hidden Markov Models (Version 2023.8.28)
2022
plotSEMM : Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models (Version 2.4)
2012
plyr : Tools for Splitting, Applying and Combining Data (Version 1.8.9)
2008
pmartR : Panomics Marketplace - Quality Control and Statistical Analysis for Panomics Data (Version 2.4.6)
2023
poisDoubleSamp : Confidence Intervals with Poisson Double Sampling (Version 1.1.1)
2015
poisbinom : A Faster Implementation of the Poisson-Binomial Distribution (Version 1.0.1)
2017
policytree : Policy Learning via Doubly Robust Empirical Welfare Maximization over Trees (Version 1.2.3)
2020
polyRAD : Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids (Version 2.0.0)
2018
polylabelr : Find the Pole of Inaccessibility (Visual Center) of a Polygon (Version 0.2.0)
2018
polyqtlR : QTL Analysis in Autopolyploid Bi-Parental F1 Populations (Version 0.1.1)
2020
polysat : Tools for Polyploid Microsatellite Analysis (Version 1.7-7)
2010
polywog : Bootstrapped Basis Regression with Oracle Model Selection (Version 0.4-1)
2012
pomdp : Infrastructure for Partially Observable Markov Decision Processes (POMDP) (Version 1.2.3)
2018
pompp : Presence-Only for Marked Point Process (Version 0.1.3)
2022
poolfstat : Computing f-Statistics and Building Admixture Graphs Based on Allele Count or Pool-Seq Read Count Data (Version 2.2.0)
2018
porridge : Ridge-Type Penalized Estimation of a Potpourri of Models (Version 0.3.3)
2019
portvine : Vine Based (Un)Conditional Portfolio Risk Measure Estimation (Version 1.0.3)
2022
ppgmmga : Projection Pursuit Based on Gaussian Mixtures and Evolutionary Algorithms (Version 1.3)
2018
pqrBayes : Bayesian Penalized Quantile Regression (Version 1.0.2)
2023
pqrfe : Penalized Quantile Regression with Fixed Effects (Version 1.1)
2022
prcbench : Testing Workbench for Precision-Recall Curves (Version 1.1.8)
2016
prclust : Penalized Regression-Based Clustering Method (Version 1.3)
2015
precrec : Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves (Version 0.14.4)
2015
predkmeans : Covariate Adaptive Clustering (Version 0.1.1)
2017
predtools : Prediction Model Tools (Version 0.0.3)
2021
primes : Fast Functions for Prime Numbers (Version 1.6.0)
2015
princurve : Fit a Principal Curve in Arbitrary Dimension (Version 2.1.6)
1999
prioriactions : Multi-Action Conservation Planning (Version 0.5.0)
2021
probe : Sparse High-Dimensional Linear Regression with PROBE (Version 1.1)
2023
processmapR : Construct Process Maps Using Event Data (Version 0.5.5)
2017
proclhmm : Latent Hidden Markov Models for Response Process Data (Version 1.0.0)
2024
prodlim : Product-Limit Estimation for Censored Event History Analysis (Version 2024.06.25)
2008
profoc : Probabilistic Forecast Combination Using CRPS Learning (Version 1.3.3)
2021
progress : Terminal Progress Bars (Version 1.2.3)
2015
projpred : Projection Predictive Feature Selection (Version 2.8.0)
2018
prome : Patient-Reported Outcome Data Analysis with Stan (Version 1.9.1.0)
2022
promises : Abstractions for Promise-Based Asynchronous Programming (Version 1.3.0)
2018
promotionImpact : Analysis & Measurement of Promotion Effectiveness (Version 0.1.5)
2019
propagate : Propagation of Uncertainty (Version 1.0-6)
2013
prophet : Automatic Forecasting Procedure (Version 1.0)
2017
prospectr : Miscellaneous Functions for Processing and Sample Selection of Spectroscopic Data (Version 0.2.7)
2013
protViz : Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics (Version 0.7.9)
2012
protolite : Highly Optimized Protocol Buffer Serializers (Version 2.3.1)
2016
prototest : Inference on Prototypes from Clusters of Features (Version 1.2)
2016
proxyC : Computes Proximity in Large Sparse Matrices (Version 0.4.1)
2018
pryr : Tools for Computing on the Language (Version 0.1.6)
2014
psBayesborrow : Bayesian Information Borrowing with Propensity Score Matching (Version 1.1.0)
2024
psbcSpeedUp : Penalized Semiparametric Bayesian Cox Models (Version 2.0.7)
2023
psd : Adaptive, Sine-Multitaper Power Spectral Density and Cross Spectrum Estimation (Version 2.1.1)
2013
psgp : Projected Spatial Gaussian Process Methods (Version 0.3-21)
2009
psp : Parameter Space Partitioning MCMC for Global Model Evaluation (Version 1.0.2)
2021
psqn : Partially Separable Quasi-Newton (Version 0.3.2)
2020
psychrolib : Psychrometric Properties of Moist and Dry Air (Version 2.5.2)
2020
qqconf : Creates Simultaneous Testing Bands for QQ-Plots (Version 1.3.2)
2021
qrencoder : Quick Response Code (QR Code) / Matrix Barcode Creator (Version 0.1.0)
2016
qris : Quantile Regression Model for Residual Lifetime Using an Induced Smoothing Approach (Version 1.1.1)
2022
qs : Quick Serialization of R Objects (Version 0.27.2)
2019
qs2 : Efficient Serialization of R Objects (Version 0.1.1)
2024
qsplines : Quaternions Splines (Version 1.0.1)
2022
qspray : Multivariate Polynomials with Rational Coefficients (Version 3.1.0)
2022
qtl2 : Quantitative Trait Locus Mapping in Experimental Crosses (Version 0.36)
2020
qtl2convert : Convert Data among QTL Mapping Packages (Version 0.30)
2020
qtl2ggplot : Data Visualization for QTL Experiments (Version 1.2.4)
2021
qtl2pleio : Testing Pleiotropy in Multiparental Populations (Version 1.4.3)
2019
qtlpoly : Random-Effect Multiple QTL Mapping in Autopolyploids (Version 0.2.4)
2021
quadrupen : Sparsity by Worst-Case Quadratic Penalties (Version 0.2-12)
2012
quadtree : Region Quadtrees for Spatial Data (Version 0.1.14)
2021
qualpalr : Automatic Generation of Qualitative Color Palettes (Version 0.4.4)
2016
quanteda.textmodels : Scaling Models and Classifiers for Textual Data (Version 0.9.9)
2020
quanteda.textplots : Plots for the Quantitative Analysis of Textual Data (Version 0.95)
2020
quanteda.textstats : Textual Statistics for the Quantitative Analysis of Textual Data (Version 0.97.2)
2020
quanteda : Quantitative Analysis of Textual Data (Version 4.1.0)
2015
quantities : Quantity Calculus for R Vectors (Version 0.2.2)
2018
quantregRanger : Quantile Regression Forests for 'ranger' (Version 1.0)
2017
quantspec : Quantile-Based Spectral Analysis of Time Series (Version 1.2-4)
2011
queuecomputer : Computationally Efficient Queue Simulation (Version 1.2.0)
2016
quickPWCR : Quickly construct and rating large binary pairwiesd comparisons (Version 1.0)
2024
qwraps2 : Quick Wraps 2 (Version 0.6.1)
2015
r2sundials : Wrapper for 'SUNDIALS' Solving ODE and Sensitivity Problem (Version 6.5.0-5)
2020
rBMF : Boolean Matrix Factorization (Version 1.1)
2020
rEDM : Empirical Dynamic Modeling ('EDM') (Version 1.15.4)
2016
rENA : Epistemic Network Analysis (Version 0.2.7)
2017
rIsing : High-Dimensional Ising Model Selection (Version 0.1.0)
2016
rLFT : Processing Linear Features (Version 1.0.1)
2020
rPBK : Inference and Prediction of Generic Physiologically-Based Kinetic Models (Version 0.2.4)
2022
rPref : Database Preferences and Skyline Computation (Version 1.4.0)
2014
rSRD : Sum of Ranking Differences Statistical Test (Version 0.1.8)
2022
rSpectral : Spectral Modularity Clustering (Version 1.0.0.10)
2022
rTRNG : Advanced and Parallel Random Number Generation via 'TRNG' (Version 4.23.1-2)
2019
rTwig : Realistic Quantitative Structure Models (Version 1.2.0)
2024
raceland : Pattern-Based Zoneless Method for Analysis and Visualization of Racial Topography (Version 1.2.1)
2019
rags2ridges : Ridge Estimation of Precision Matrices from High-Dimensional Data (Version 2.2.7)
2014
rainette : The Reinert Method for Textual Data Clustering (Version 0.3.1.1)
2020
ramcmc : Robust Adaptive Metropolis Algorithm (Version 0.1.2)
2016
randomUniformForest : Random Uniform Forests for Classification, Regression and Unsupervised Learning (Version 1.1.6)
2014
rangeBuilder : Occurrence Filtering, Geographic Standardization and Generation of Species Range Polygons (Version 2.2)
2016
ranger : A Fast Implementation of Random Forests (Version 0.17.0)
2015
rankdist : Distance Based Ranking Models (Version 1.1.4)
2015
ranktreeEnsemble : Ensemble Models of Rank-Based Trees with Extracted Decision Rules (Version 0.23)
2023
rapidsplithalf : A Fast Split-Half Reliability Algorithm (Version 0.3)
2024
rare : Linear Model with Tree-Based Lasso Regularization for Rare Features (Version 0.1.1)
2018
raster : Geographic Data Analysis and Modeling (Version 3.6-30)
2010
ratematrix : Bayesian Estimation of the Evolutionary Rate Matrix (Version 1.2.4)
2018
rater : Statistical Models of Repeated Categorical Rating Data (Version 1.3.1)
2020
ratioOfQsprays : Fractions of Multivariate Polynomials with Rational Coefficients (Version 1.1.0)
2024
ravetools : Signal and Image Processing Toolbox for Analyzing Intracranial Electroencephalography Data (Version 0.1.9)
2022
rayimage : Image Processing for Simulated Cameras (Version 0.11.0)
2020
rayrender : Build and Raytrace 3D Scenes (Version 0.34.3)
2019
rayshader : Create Maps and Visualize Data in 2D and 3D (Version 0.37.3)
2018
rayvertex : 3D Software Rasterizer (Version 0.11.4)
2021
rbacon : Age-Depth Modelling using Bayesian Statistics (Version 3.3.1)
2017
rbioacc : Inference and Prediction of ToxicoKinetic (TK) Models (Version 1.2.1)
2021
rbiom : Read/Write, Transform, and Summarize 'BIOM' Data (Version 1.0.3)
2020
rbridge : Restricted Bridge Estimation (Version 1.0.2)
2019
rbscCI : Blyth-Still-Casella Confidence Interval (Version 0.1.1)
2020
rcbayes : Estimate Rogers-Castro Migration Age Schedules with Bayesian Models (Version 0.2.0)
2021
rcccd : Class Cover Catch Digraph Classification (Version 0.3.2)
2023
rcontroll : Individual-Based Forest Growth Simulator 'TROLL' (Version 0.1.2)
2023
rcpptimer : 'Rcpp' Tic-Toc Timer with 'OpenMP' Support (Version 1.2.1)
2024
rdist : Calculate Pairwise Distances (Version 0.0.5)
2017
re2 : R Interface to Google RE2 (C++) Regular Expression Library (Version 0.1.3)
2021
reReg : Recurrent Event Regression (Version 1.4.7)
2015
read.gt3x : Parse 'ActiGraph' 'GT3X'/'GT3X+' 'Accelerometer' Data (Version 1.2.0)
2021
readobj : Fast Reader for 'Wavefront' OBJ 3D Scene Files (Version 0.4.1)
2017
readsdmx : Read SDMX-XML Data (Version 0.3.1)
2019
readsparse : Read and Write Sparse Matrices in 'SVMLight' and 'LibSVM' Formats (Version 0.1.5-6)
2021
readstata13 : Import 'Stata' Data Files (Version 0.10.1)
2015
readxlsb : Read 'Excel' Binary (.xlsb) Workbooks (Version 0.1.61)
2019
recexcavAAR : 3D Reconstruction of Archaeological Excavations (Version 0.3.0)
2016
reclin2 : Record Linkage Toolkit (Version 0.5.0)
2022
recmap : Compute the Rectangular Statistical Cartogram (Version 1.0.17)
2016
recometrics : Evaluation Metrics for Implicit-Feedback Recommender Systems (Version 0.1.6-3)
2021
reconstructr : Session Reconstruction and Analysis (Version 2.0.4)
2014
recosystem : Recommender System using Matrix Factorization (Version 0.5.1)
2014
recurse : Computes Revisitation Metrics for Trajectory Data (Version 1.4.0)
2017
reda : Recurrent Event Data Analysis (Version 0.5.4)
2015
redist : Simulation Methods for Legislative Redistricting (Version 4.2.0)
2015
redistmetrics : Redistricting Metrics (Version 1.0.7)
2021
refinr : Cluster and Merge Similar Values Within a Character Vector (Version 0.3.3)
2018
registr : Curve Registration for Exponential Family Functional Data (Version 2.1.0)
2020
regmed : Regularized Mediation Analysis (Version 2.1.0)
2020
regmhmm : 'regmhmm' Fits Hidden Markov Models with Regularization (Version 1.0.0)
2023
regnet : Network-Based Regularization for Generalized Linear Models (Version 1.0.1)
2017
rego : Automatic Time Series Forecasting and Missing Value Imputation (Version 1.6.1)
2022
regsem : Regularized Structural Equation Modeling (Version 1.9.5)
2016
relliptical : The Truncated Elliptical Family of Distributions (Version 1.3.0)
2021
rem : Relational Event Models (REM) (Version 1.3.1)
2016
rema : Rare Event Meta Analysis (Version 0.0.1)
2021
remaCor : Random Effects Meta-Analysis for Correlated Test Statistics (Version 0.0.18)
2022
remify : Processing and Transforming Relational Event History Data (Version 3.2.6)
2023
remotePARTS : Spatiotemporal Autoregression Analyses for Large Data Sets (Version 1.0.4)
2023
remote : Empirical Orthogonal Teleconnections in R (Version 1.2.1)
2014
remstats : Computes Statistics for Relational Event History Data (Version 3.2.2)
2023
remstimate : Optimization Frameworks for Tie-Oriented and Actor-Oriented Relational Event Models (Version 2.3.11)
2023
repfdr : Replicability Analysis for Multiple Studies of High Dimension (Version 1.2.3)
2014
repolr : Repeated Measures Proportional Odds Logistic Regression (Version 3.4)
2012
representr : Create Representative Records After Entity Resolution (Version 0.1.5)
2020
resemble : Memory-Based Learning in Spectral Chemometrics (Version 2.2.3)
2014
reservr : Fit Distributions and Neural Networks to Censored and Truncated Data (Version 0.0.3)
2022
reshape2 : Flexibly Reshape Data: A Reboot of the Reshape Package (Version 1.4.4)
2010
resultant : Utilities for Multivariate Polynomials with Rational Coefficients (Version 1.0.0)
2024
rethnicity : Predicting Ethnic Group from Names (Version 0.2.6)
2021
reticulate : Interface to 'Python' (Version 1.39.0)
2017
revdbayes : Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis (Version 1.5.5)
2016
revealedPrefs : Revealed Preferences and Microeconomic Rationality (Version 0.4.1)
2014
rexpokit : R Wrappers for EXPOKIT; Other Matrix Functions (Version 0.26.6.14)
2013
rflashtext : FlashText Algorithm for Finding and Replacing Words (Version 1.0.0)
2022
rflexscan : The Flexible Spatial Scan Statistic (Version 1.1.0)
2019
rgraph6 : Representing Graphs as 'graph6', 'digraph6' or 'sparse6' Strings (Version 2.0-4)
2022
rhoR : Rho for Inter Rater Reliability (Version 1.3.0.3)
2016
ridgetorus : PCA on the Torus via Density Ridges (Version 1.0.2)
2022
rim : Interface to 'Maxima', Enabling Symbolic Computation (Version 0.7.0)
2021
ripserr : Calculate Persistent Homology with Ripser-Based Engines (Version 0.1.1)
2020
riskParityPortfolio : Design of Risk Parity Portfolios (Version 0.2.2)
2018
riskRegression : Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks (Version 2023.12.21)
2011
rivnet : Extract and Analyze Rivers from Elevation Data (Version 0.5.0)
2023
rivr : Steady and Unsteady Open-Channel Flow Computation (Version 1.2-3)
2015
rjaf : Regularized Joint Assignment Forest with Treatment Arm Clustering (Version 0.1.0)
0
rkriging : Kriging Modeling (Version 1.0.1)
2024
rkvo : Read Key/Value Pair Observations (Version 0.1)
2014
rlas : Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data (Version 1.8.0)
2016
rlemon : R Access to LEMON Graph Algorithms (Version 0.2.1)
2022
rlfsm : Simulations and Statistical Inference for Linear Fractional Stable Motions (Version 1.1.2)
2018
rlibkriging : Kriging Models using the 'libKriging' Library (Version 0.9-0.4)
2022
rliger : Linked Inference of Genomic Experimental Relationships (Version 2.1.0)
2021
rlme : Rank-Based Estimation and Prediction in Random Effects Nested Models (Version 0.5)
2013
rmBayes : Performing Bayesian Inference for Repeated-Measures Designs (Version 0.1.16)
2021
rmarchingcubes : Calculate 3D Contour Meshes Using the Marching Cubes Algorithm (Version 0.1.3)
2021
rmi : Mutual Information Estimators (Version 0.1.1)
2018
rmgarch : Multivariate GARCH Models (Version 1.3-9)
2013
rminizinc : R Interface to 'MiniZinc' (Version 0.0.8)
2020
rminqa : Derivative-Free Optimization in R using C++ (Version 0.2.2)
2022
rmsb : Bayesian Regression Modeling Strategies (Version 1.1-1)
2020
rmumps : Wrapper for MUMPS Library (Version 5.2.1-30)
2015
rncl : An Interface to the Nexus Class Library (Version 0.8.7)
2014
rnndescent : Nearest Neighbor Descent Method for Approximate Nearest Neighbors (Version 0.1.6)
2023
robStepSplitReg : Robust Stepwise Split Regularized Regression (Version 1.1.0)
2023
robCompositions : Compositional Data Analysis (Version 2.4.1)
2009
roben : Robust Bayesian Variable Selection for Gene-Environment Interactions (Version 0.1.1)
2020
robmixglm : Robust Generalized Linear Models (GLM) using Mixtures (Version 1.2-4)
2018
roboBayes : Robust Online Bayesian Monitoring (Version 1.2)
2022
robregcc : Robust Regression with Compositional Covariates (Version 1.1)
2019
robsel : Robust Selection Algorithm (Version 0.1.0)
2021
robslopes : Fast Algorithms for Robust Slopes (Version 1.1.3)
2021
robusTest : Calibrated Correlation and Two-Sample Tests (Version 1.1.0)
2022
robustBLME : Robust Bayesian Linear Mixed-Effects Models using ABC (Version 0.1.3)
2017
robustHD : Robust Methods for High-Dimensional Data (Version 0.8.1)
2012
robustcov : Collection of Robust Covariance and (Sparse) Precision Matrix Estimators (Version 0.1)
2021
robustlmm : Robust Linear Mixed Effects Models (Version 3.3-1)
2013
robustmatrix : Robust Matrix-Variate Parameter Estimation (Version 0.1.3)
2024
robustreg : Robust Regression Functions (Version 0.1-11)
2012
rocTree : Receiver Operating Characteristic (ROC)-Guided Classification and Survival Tree (Version 1.1.1)
2019
rococo : Robust Rank Correlation Coefficient and Test (Version 1.1.9)
2011
rofanova : Robust Functional Analysis of Variance (Version 1.0.0)
2022
roll : Rolling and Expanding Statistics (Version 1.1.7)
2016
rolog : Query 'SWI'-'Prolog' from R (Version 0.9.18)
2022
roptim : General Purpose Optimization in R using C++ (Version 0.1.6)
2018
rotasym : Tests for Rotational Symmetry on the Hypersphere (Version 1.1.5)
2019
rotations : Working with Rotation Data (Version 1.6.5)
2013
rpact : Confirmatory Adaptive Clinical Trial Design and Analysis (Version 4.1.0)
2018
rpart.LAD : Least Absolute Deviation Regression Trees (Version 0.1.3)
2019
rpf : Response Probability Functions (Version 1.0.14)
2012
rpm : Modeling of Revealed Preferences Matchings (Version 0.7-3)
2023
rpms : Recursive Partitioning for Modeling Survey Data (Version 0.5.1)
2016
rpql : Regularized PQL for Joint Selection in GLMMs (Version 0.8.1)
2016
rqPen : Penalized Quantile Regression (Version 4.1.2)
2014
rrMixture : Reduced-Rank Mixture Models (Version 0.1-2)
2022
rrandvec : Generate Random Vectors Whose Components Sum Up to One (Version 1.0.0)
2023
rrcovHD : Robust Multivariate Methods for High Dimensional Data (Version 0.3-1)
2012
rrecsys : Environment for Evaluating Recommender Systems (Version 0.9.7.3.1)
2016
rres : Realized Relatedness Estimation and Simulation (Version 1.1)
2018
rrr : Reduced-Rank Regression (Version 1.0.0)
2016
rrpack : Reduced-Rank Regression (Version 0.1-13)
2017
rrum : Bayesian Estimation of the Reduced Reparameterized Unified Model with Gibbs Sampling (Version 0.2.1)
2019
rsides : SIDES-Based Subgroup Search Algorithms (Version 0.1)
2024
rsparse : Statistical Learning on Sparse Matrices (Version 0.5.2)
2019
rstan : R Interface to Stan (Version 2.32.6)
2015
rstanbdp : Bayesian Deming Regression for Method Comparison (Version 0.0.3)
2024
rstanarm : Bayesian Applied Regression Modeling via Stan (Version 2.32.1)
2016
rstanemax : Emax Model Analysis with 'Stan' (Version 0.1.5)
2019
rstantools : Tools for Developing R Packages Interfacing with 'Stan' (Version 2.4.0)
2016
rstpm2 : Smooth Survival Models, Including Generalized Survival Models (Version 1.6.6)
2015
rsvddpd : Robust Singular Value Decomposition using Density Power Divergence (Version 1.0.0)
2021
rswipl : Embed 'SWI'-'Prolog' (Version 9.3.12)
2022
rsyncrosim : The R Interface to 'SyncroSim' (Version 2.0.1)
2020
rtdists : Response Time Distributions (Version 0.11-5)
2014
rtk : Rarefaction Tool Kit (Version 0.2.6.1)
2016
rtkore : 'STK++' Core Library Integration to 'R' using 'Rcpp' (Version 1.6.12)
2015
rtrend : Trend Estimating Tools (Version 0.1.5)
2021
rts2 : Real-Time Disease Surveillance (Version 0.7.6)
2022
rubias : Bayesian Inference from the Conditional Genetic Stock Identification Model (Version 0.3.4)
2018
rucrdtw : R Bindings for the UCR Suite (Version 0.1.6)
2016
rugarch : Univariate GARCH Models (Version 1.5-3)
2011
ruimtehol : Learn Text 'Embeddings' with 'Starspace' (Version 0.3.2)
2019
runner : Running Operations for Vectors (Version 0.4.4)
2018
rust : Ratio-of-Uniforms Simulation with Transformation (Version 1.4.3)
2016
rvMF : Fast Generation of von Mises-Fisher Distributed Pseudo-Random Vectors (Version 0.1.0)
2023
rvg : R Graphics Devices for 'Office' Vector Graphics Output (Version 0.3.4)
2016
rvinecopulib : High Performance Algorithms for Vine Copula Modeling (Version 0.6.3.1.1)
2017
rwfec : R Wireless, Forward Error Correction (Version 0.2)
2015
rxode2 : Facilities for Simulating from ODE-Based Models (Version 3.0.2)
2022
rxode2ll : Log-Likelihood Functions for 'rxode2' (Version 2.0.11)
2022
rxylib : Import XY-Data into R (Version 0.2.14)
2017
s2 : Spherical Geometry Operators Using the S2 Geometry Library (Version 1.1.7)
2016
s2net : The Generalized Semi-Supervised Elastic-Net (Version 1.0.7)
2020
sBIC : Computing the Singular BIC for Multiple Models (Version 0.2.0)
2016
saccadr : Extract Saccades via an Ensemble of Methods Approach (Version 0.1.3)
2022
saeMSPE : Compute MSPE Estimates for the Fay Herriot Model and Nested Error Regression Model (Version 1.2)
2022
saeRobust : Robust Small Area Estimation (Version 0.5.0)
2016
saeczi : Small Area Estimation for Continuous Zero Inflated Data (Version 0.2.0)
2024
samplr : Compare Human Performance to Sampling Algorithms (Version 1.0.1)
2024
samurais : Statistical Models for the Unsupervised Segmentation of Time-Series ('SaMUraiS') (Version 0.1.0)
2019
sanic : Solving Ax = b Nimbly in C++ (Version 0.0.2)
2020
sanketphonetictranslator : Phonetic Transliteration Between Hindi and English (Version 0.1.0)
2024
santoku : A Versatile Cutting Tool (Version 1.0.0)
2020
sarima : Simulation and Prediction with Seasonal ARIMA Models (Version 0.9.3)
2017
sasfunclust : Sparse and Smooth Functional Clustering (Version 1.0.0)
2021
satdad : Sensitivity Analysis Tools for Dependence and Asymptotic Dependence (Version 1.1)
2023
satellite : Handling and Manipulating Remote Sensing Data (Version 1.0.5)
2015
saturnin : Spanning Trees Used for Network Inference (Version 1.1.1)
2015
sbfc : Selective Bayesian Forest Classifier (Version 1.0.3)
2016
sbmSDP : Semidefinite Programming for Fitting Block Models of Equal Block Sizes (Version 0.2)
2015
sbm : Stochastic Blockmodels (Version 0.4.7)
2020
sbo : Text Prediction via Stupid Back-Off N-Gram Models (Version 0.5.0)
2020
sboost : Machine Learning with AdaBoost on Decision Stumps (Version 0.1.2)
2018
sbrl : Scalable Bayesian Rule Lists Model (Version 1.4)
2016
scDHA : Single-Cell Decomposition using Hierarchical Autoencoder (Version 1.2.2)
2021
scINSIGHT : Interpretation of Heterogeneous Single-Cell Gene Expression Data (Version 0.1.4)
2021
scITD : Single-Cell Interpretable Tensor Decomposition (Version 1.0.4)
2021
scModels : Fitting Discrete Distribution Models to Count Data (Version 1.0.4)
2019
scanstatistics : Space-Time Anomaly Detection using Scan Statistics (Version 1.1.1)
2016
sccore : Core Utilities for Single-Cell RNA-Seq (Version 1.0.5)
2020
scellpam : Applying Partitioning Around Medoids to Single Cell Data with High Number of Cells (Version 1.4.6.2)
2022
scistreer : Maximum-Likelihood Perfect Phylogeny Inference at Scale (Version 1.2.0)
2022
scoper : Spectral Clustering-Based Method for Identifying B Cell Clones (Version 1.3.0)
2018
scoredec : S-Core Graph Decomposition (Version 0.1.1)
2024
scorematchingad : Score Matching Estimation by Automatic Differentiation (Version 0.0.67)
2024
scorepeak : Peak Functions for Peak Detection in Univariate Time Series (Version 0.1.2)
2019
scoringRules : Scoring Rules for Parametric and Simulated Distribution Forecasts (Version 1.1.3)
2016
scrm : Simulating the Evolution of Biological Sequences (Version 1.7.5)
2014
scrypt : Key Derivation Functions for R Based on Scrypt (Version 0.1.6)
2014
sdcHierarchies : Create and (Interactively) Modify Nested Hierarchies (Version 0.21.0)
2019
sdcMicro : Statistical Disclosure Control Methods for Anonymization of Data and Risk Estimation (Version 5.7.8)
2007
sdcTable : Methods for Statistical Disclosure Control in Tabular Data (Version 0.32.6)
2009
sdetorus : Statistical Tools for Toroidal Diffusions (Version 0.1.10)
2020
sdpdth : M-Estimator for Threshold Spatial Dynamic Panel Data Model (Version 0.2)
2021
sdsfun : Spatial Data Science Complementary Features (Version 0.4.1)
2024
secrdesign : Sampling Design for Spatially Explicit Capture-Recapture (Version 2.9.2)
2014
secr : Spatially Explicit Capture-Recapture (Version 5.1.0)
2010
secsse : Several Examined and Concealed States-Dependent Speciation and Extinction (Version 3.1.0)
2019
secure : Sequential Co-Sparse Factor Regression (Version 0.6)
2017
segMGarch : Multiple Change-Point Detection for High-Dimensional GARCH Processes (Version 1.2)
2018
segclust2d : Bivariate Segmentation/Clustering Methods and Tools (Version 0.3.3)
2018
segmag : Determine Event Boundaries in Event Segmentation Experiments (Version 1.2.4)
2014
segmenTier : Similarity-Based Segmentation of Multidimensional Signals (Version 0.1.2)
2019
segmentr : Segment Data With Maximum Likelihood (Version 0.2.0)
2019
segregation : Entropy-Based Segregation Indices (Version 1.1.0)
2018
segtest : Tests for Segregation Distortion in Polyploids (Version 1.0.1)
2024
seismicRoll : Fast Rolling Functions for Seismology using 'Rcpp' (Version 1.1.5)
2015
selectiveInference : Tools for Post-Selection Inference (Version 1.2.5)
2015
semaphore : Shared Memory Atomic Operations (Version 1.0.2)
2024
semicmprskcoxmsm : Use Inverse Probability Weighting to Estimate Treatment Effect for Semi Competing Risks Data (Version 0.2.0)
2022
semidist : Measure Dependence Between Categorical and Continuous Variables (Version 0.1.0)
2023
semver : 'Semantic Versioning V2.0.0' Parser (Version 0.2.0)
2017
sensitivity : Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.1)
2006
sensobol : Computation of Variance-Based Sensitivity Indices (Version 1.1.5)
2019
sentencepiece : Text Tokenization using Byte Pair Encoding and Unigram Modelling (Version 0.2.3)
2020
sentometrics : An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction (Version 1.0.0)
2017
sentopics : Tools for Joint Sentiment and Topic Analysis of Textual Data (Version 0.7.4)
2022
seqHMM : Mixture Hidden Markov Models for Social Sequence Data and Other Multivariate, Multichannel Categorical Time Series (Version 1.2.6)
2015
seqtrie : Radix Tree and Trie-Based String Distances (Version 0.2.8)
2023
serocalculator : Estimating Infection Rates from Serological Data (Version 1.0.3)
2024
serosv : Model Infectious Disease Parameters from Serosurveys (Version 1.0.1)
2024
serrsBayes : Bayesian Modelling of Raman Spectroscopy (Version 0.5-0)
2018
sfcurve : 2x2, 3x3 and Nxn Space-Filling Curves (Version 1.0.0)
2024
sfcr : Simulate Stock-Flow Consistent Models (Version 0.2.1)
2021
sfheaders : Converts Between R Objects and Simple Feature Objects (Version 0.4.4)
2019
sgd : Stochastic Gradient Descent for Scalable Estimation (Version 1.1.2)
2015
sglg : Fitting Semi-Parametric Generalized log-Gamma Regression Models (Version 0.2.2)
2017
shapr : Prediction Explanation with Dependence-Aware Shapley Values (Version 0.2.2)
2020
sharpeRratio : Moment-Free Estimation of Sharpe Ratios (Version 1.4.3)
2016
shrinkDSM : Efficient Bayesian Inference for Dynamic Survival Models with Shrinkage (Version 0.2.0)
2021
shrinkTVP : Efficient Bayesian Inference for Time-Varying Parameter Models with Shrinkage (Version 3.0.1)
2019
shrinkTVPVAR : Efficient Bayesian Inference for TVP-VAR-SV Models with Shrinkage (Version 0.1.1)
2024
sigminer : Extract, Analyze and Visualize Mutational Signatures for Genomic Variations (Version 2.3.1)
2019
signnet : Methods to Analyse Signed Networks (Version 1.0.4)
2020
simFrame : Simulation Framework (Version 0.5.4)
2009
simPop : Simulation of Complex Synthetic Data Information (Version 2.1.3)
2014
simRestore : Simulate the Effect of Management Policies on Restoration Efforts (Version 1.1.4)
2023
simStateSpace : Simulate Data from State Space Models (Version 1.2.2)
2023
simcdm : Simulate Cognitive Diagnostic Model ('CDM') Data (Version 0.1.2)
2019
simcross : Simulate Experimental Crosses (Version 0.6)
2020
simer : Data Simulation for Life Science and Breeding (Version 0.9.0.5)
2022
simfam : Simulate and Model Family Pedigrees with Structured Founders (Version 1.1.6)
2021
simmer : Discrete-Event Simulation for R (Version 4.4.7)
2015
simmr : A Stable Isotope Mixing Model (Version 0.5.1.217)
2015
simplextree : Provides Tools for Working with General Simplicial Complexes (Version 1.0.1)
2020
simtrial : Clinical Trial Simulation (Version 0.4.1)
2023
simstudy : Simulation of Study Data (Version 0.8.1)
2016
simts : Time Series Analysis Tools (Version 0.2.2)
2019
singR : Simultaneous Non-Gaussian Component Analysis (Version 0.1.2)
2022
sirt : Supplementary Item Response Theory Models (Version 4.1-15)
2013
sirus : Stable and Interpretable RUle Set (Version 0.3.3)
2019
sitmo : Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files (Version 2.0.2)
2016
sits : Satellite Image Time Series Analysis for Earth Observation Data Cubes (Version 1.5.1)
2022
sketching : Sketching of Data via Random Subspace Embeddings (Version 0.1.2)
2022
skm : Selective k-Means (Version 0.1.5.4)
2017
skpr : Design of Experiments Suite: Generate and Evaluate Optimal Designs (Version 1.7.1)
2017
slasso : S-LASSO Estimator for the Function-on-Function Linear Regression (Version 1.0.0)
2021
slca : Structural Modeling for Multiple Latent Class Variables (Version 1.2.0)
2024
slcm : Sparse Latent Class Model for Cognitive Diagnosis (Version 0.1.0)
2023
sleev : Semiparametric Likelihood Estimation with Errors in Variables (Version 1.0.3)
2021
slfm : Fitting a Bayesian Sparse Latent Factor Model in Gene Expression Analysis (Version 1.0.2)
2014
smam : Statistical Modeling of Animal Movements (Version 0.7.2)
2013
smartsnp : Fast Multivariate Analyses of Big Genomic Data (Version 1.1.0)
2021
smerc : Statistical Methods for Regional Counts (Version 1.8.4)
2015
smile : Spatial Misalignment: Interpolation, Linkage, and Estimation (Version 1.0.5)
2022
smmR : Simulation, Estimation and Reliability of Semi-Markov Models (Version 1.0.3)
2021
smoof : Single and Multi-Objective Optimization Test Functions (Version 1.6.0.3)
2015
smooth : Forecasting Using State Space Models (Version 4.1.0)
2016
smoots : Nonparametric Estimation of the Trend and Its Derivatives in TS (Version 1.1.4)
2019
smurf : Sparse Multi-Type Regularized Feature Modeling (Version 1.1.5)
2018
snowboot : Bootstrap Methods for Network Inference (Version 1.0.2)
2015
snplist : Tools to Create Gene Sets (Version 0.18.2)
2013
snpsettest : A Set-Based Association Test using GWAS Summary Statistics (Version 0.1.2)
2021
socceR : Evaluating Sport Tournament Predictions (Version 0.1.1)
2019
social : Social Autocorrelation (Version 1.0)
2017
sommer : Solving Mixed Model Equations in R (Version 4.3.6)
2016
sorcering : Soil Organic Carbon and CN Ratio Driven Nitrogen Modelling Framework (Version 1.1.0)
2021
sox : Structured Learning in Time-Dependent Cox Models (Version 1.2)
2023
spBFA : Spatial Bayesian Factor Analysis (Version 1.3)
2019
spBPS : Bayesian Predictive Stacking for Scalable Geospatial Transfer Learning (Version 0.0-4)
2024
spBayesSurv : Bayesian Modeling and Analysis of Spatially Correlated Survival Data (Version 1.1.8)
2014
spCP : Spatially Varying Change Points (Version 1.3)
2018
spFW : Hierarchical Spatial Finlay-Wilkinson Model (Version 0.1.0)
2022
spGARCH : Spatial ARCH and GARCH Models (spGARCH) (Version 0.2.2)
2018
spaMM : Mixed-Effect Models, with or without Spatial Random Effects (Version 4.5.0)
2013
spacefillr : Space-Filling Random and Quasi-Random Sequences (Version 0.3.3)
2021
spam : SPArse Matrix (Version 2.11-0)
2007
sparkwarc : Load WARC Files into Apache Spark (Version 0.1.6)
2017
sparseDFM : Estimate Dynamic Factor Models with Sparse Loadings (Version 1.0)
2023
sparseHessianFD : Numerical Estimation of Sparse Hessians (Version 0.3.3.7)
2012
sparseLTSEigen : RcppEigen back end for sparse least trimmed squares regression (Version 0.2.0.1)
2012
sparseinv : Computation of the Sparse Inverse Subset (Version 0.1.3)
2018
sparsepp : 'Rcpp' Interface to 'sparsepp' (Version 1.22)
2016
sparsereg : Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data (Version 1.2)
2015
sparsevb : Spike-and-Slab Variational Bayes for Linear and Logistic Regression (Version 0.1.0)
2021
sparsio : I/O Operations with Sparse Matrices (Version 1.0.1)
2017
sparta : Sparse Tables (Version 0.8.4)
2020
sparvaride : Variance Identification in Sparse Factor Analysis (Version 0.1.0)
2023
spass : Study Planning and Adaptation of Sample Size (Version 1.3)
2016
spatgraphs : Graph Edge Computations for Spatial Point Patterns (Version 3.4)
2007
spaths : Shortest Paths Between Points in Grids (Version 1.1.3)
2024
spatialising : Ising Model for Spatial Data (Version 0.6.0)
2023
spatialrisk : Calculating Spatial Risk (Version 0.7.1)
2018
spatialwarnings : Spatial Early Warning Signals of Ecosystem Degradation (Version 3.1.0)
2017
spatialwidget : Formats Spatial Data for Use in Htmlwidgets (Version 0.2.5)
2018
spbal : Spatially Balanced Sampling Algorithms (Version 1.0.0)
2024
spduration : Split-Population Duration (Cure) Regression (Version 0.17.2)
2015
specklestar : Reduction of Speckle Data from BTA 6-m Telescope (Version 0.0.1.7)
2018
specs : Single-Equation Penalized Error-Correction Selector (SPECS) (Version 1.0.1)
2020
spectralGraphTopology : Learning Graphs from Data via Spectral Constraints (Version 0.2.3)
2019
spectre : Predict Regional Community Composition (Version 1.0.2)
2021
speedytax : Rapidly Import Classifier Results into 'phyloseq' (Version 1.0.4)
2024
spfa : Semi-Parametric Factor Analysis (Version 1.0)
2023
sphunif : Uniformity Tests on the Circle, Sphere, and Hypersphere (Version 1.4.0)
2021
spiderbar : Parse and Test Robots Exclusion Protocol Files and Rules (Version 0.2.5)
2017
spinBayes : Semi-Parametric Gene-Environment Interaction via Bayesian Variable Selection (Version 0.2.1)
2019
splines2 : Regression Spline Functions and Classes (Version 0.5.3)
2016
splithalf : Calculate Task Split Half Reliability Estimates (Version 0.8.2)
2017
splmm : Simultaneous Penalized Linear Mixed Effects Models (Version 1.2.0)
2020
spnn : Scale Invariant Probabilistic Neural Networks (Version 1.2.1)
2018
sport : Sequential Pairwise Online Rating Techniques (Version 0.2.1)
2018
spray : Sparse Arrays and Multivariate Polynomials (Version 1.0-26)
2016
spreadr : Simulating Spreading Activation in a Network (Version 0.2.0)
2018
springer : Sparse Group Variable Selection for Gene-Environment Interactions in the Longitudinal Study (Version 0.1.9)
2020
sprintr : Sparse Reluctant Interaction Modeling (Version 0.9.0)
2019
spsurv : Bernstein Polynomial Based Semiparametric Survival Analysis (Version 1.0.0)
2020
squat : Statistics for Quaternion Temporal Data (Version 0.3.0)
2022
srm : Structural Equation Modeling for the Social Relations Model (Version 0.4-26)
2019
ssMousetrack : Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan (Version 1.1.6)
2018
ssdtools : Species Sensitivity Distributions (Version 2.1.0)
2018
sstvars : Toolkit for Reduced Form and Structural Smooth Transition Vector Autoregressive Models (Version 1.0.1)
2024
staggered : Efficient Estimation Under Staggered Treatment Timing (Version 1.2.1)
2021
starma : Modelling Space Time AutoRegressive Moving Average (STARMA) Processes (Version 1.3)
2015
starvz : R-Based Visualization Techniques for Task-Based Applications (Version 0.8.2)
2020
statespacer : State Space Modelling in 'R' (Version 0.5.0)
2020
statgenGWAS : Genome Wide Association Studies (Version 1.0.9)
2020
statgenIBD : Calculation of IBD Probabilities (Version 1.0.7)
2021
statgenQTLxT : Multi-Trait and Multi-Trial Genome Wide Association Studies (Version 1.0.2)
2023
stcos : Space-Time Change of Support (Version 0.3.1)
2019
stcpR6 : Sequential Test and Change-Point Detection Algorithms Based on E-Values / E-Detectors (Version 0.9.8)
2024
stdvectors : C++ Standard Library Vectors in R (Version 0.0.5)
2017
steadyICA : ICA and Tests of Independence via Multivariate Distance Covariance (Version 1.0)
2015
stepR : Multiscale Change-Point Inference (Version 2.1-10)
2015
stepSplitReg : Stepwise Split Regularized Regression (Version 1.0.3)
2022
steps : Spatially- and Temporally-Explicit Population Simulator (Version 1.3.0)
2019
stfit : Spatio-Temporal Functional Imputation Tool (Version 0.99.9)
2020
stlplus : Enhanced Seasonal Decomposition of Time Series by Loess (Version 0.5.1)
2016
stm : Estimation of the Structural Topic Model (Version 1.3.7)
2014
stochvol : Efficient Bayesian Inference for Stochastic Volatility (SV) Models (Version 3.2.5)
2013
stockR : Identifying Stocks in Genetic Data (Version 1.0.76)
2018
stocks : Stock Market Analysis (Version 1.1.4)
2015
stosim : Stochastic Simulator for Reliability Modeling of Repairable Systems (Version 0.0.15)
2014
stpm : Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes (Version 1.7.12)
2016
stplanr : Sustainable Transport Planning (Version 1.2.2)
2015
stpphawkes : Missing Data for Marked Hawkes Process (Version 0.2.1)
2023
strat : An Implementation of the Stratification Index (Version 0.1)
2016
stratEst : Strategy Estimation (Version 1.1.6)
2018
strawr : Fast Implementation of Reading/Dump for .hic Files (Version 0.0.92)
2021
stream : Infrastructure for Data Stream Mining (Version 2.0-2)
2013
strider : Strided Iterator and Range (Version 1.3)
2017
stringfish : Alt String Implementation (Version 0.16.0)
2020
stringmagic : Character String Operations and Interpolation, Magic Edition (Version 1.1.2)
2023
striprtf : Extract Text from RTF File (Version 0.6.0)
2016
strucchangeRcpp : Testing, Monitoring, and Dating Structural Changes: C++ Version (Version 1.5-4-1.0.0)
2021
sts : Estimation of the Structural Topic and Sentiment-Discourse Model for Text Analysis (Version 1.1)
2024
subsampling : Optimal Subsampling Methods for Statistical Models (Version 0.1.1)
2024
sumSome : Permutation True Discovery Guarantee by Sum-Based Tests (Version 1.1.0)
2021
sundialr : An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE) Solvers (Version 0.1.4.2)
2018
superml : Build Machine Learning Models Like Using Python's Scikit-Learn Library in R (Version 0.5.7)
2018
surbayes : Bayesian Analysis of Seemingly Unrelated Regression Models (Version 0.1.2)
2020
sureLDA : A Novel Multi-Disease Automated Phenotyping Method for the EHR (Version 0.1.0-1)
2020
surtvep : Cox Non-Proportional Hazards Model with Time-Varying Coefficients (Version 1.0.0)
2023
survPen : Multidimensional Penalized Splines for Survival and Net Survival Models (Version 1.6.0)
2019
survSNP : Power Calculations for SNP Studies with Censored Outcomes (Version 0.26)
2012
surveil : Time Series Models for Disease Surveillance (Version 0.3.0)
2021
survey : Analysis of Complex Survey Samples (Version 4.4-2)
2003
surveybootstrap : Bootstrap with Survey Data (Version 0.0.3)
2016
surveysd : Survey Standard Error Estimation for Cumulated Estimates and their Differences in Complex Panel Designs (Version 1.3.1)
2019
survidm : Inference and Prediction in an Illness-Death Model (Version 1.3.2)
2017
surveyvoi : Survey Value of Information (Version 1.0.6)
2021
survival.svb : Fit High-Dimensional Proportional Hazards Models (Version 0.0-2)
2021
survivalmodels : Models for Survival Analysis (Version 0.1.191)
2020
survstan : Fitting Survival Regression Models via 'Stan' (Version 0.0.7.1)
2023
svars : Data-Driven Identification of SVAR Models (Version 1.3.11)
2017
svgViewR : 3D Animated Interactive Visualizations Using SVG and WebGL (Version 1.4.3)
2014
svines : Stationary Vine Copula Models (Version 0.2.3)
2022
sweater : Speedy Word Embedding Association Test and Extras Using R (Version 0.1.8)
2021
swephR : High Precision Swiss Ephemeris (Version 0.3.1)
2019
switchSelection : Endogenous Switching and Sample Selection Regression Models (Version 2.0.0)
2023
symbolicQspray : Multivariate Polynomials with Symbolic Parameters in their Coefficients (Version 1.1.0)
2024
symengine : Interface to the 'SymEngine' Library (Version 0.2.6)
2020
symmetry : Testing for Symmetry of Data and Model Residuals (Version 0.2.3)
2019
symphony : Efficient and Precise Single-Cell Reference Atlas Mapping (Version 0.1.1)
2021
synMicrodata : Synthetic Microdata Generator (Version 2.0.0)
2023
synchronicity : Boost Mutex Functionality in R (Version 1.3.10)
2010
synlik : Synthetic Likelihood Methods for Intractable Likelihoods (Version 0.1.6)
2014
synthACS : Synthetic Microdata and Spatial MicroSimulation Modeling for ACS Data (Version 1.7.1)
2016
systemicrisk : Systemic Risk and Network Reconstruction (Version 0.4.3)
2015
tabularMLC : Tabular Maximum Likelihood Classifier (Version 0.0.3)
2021
tabulate : Pretty Console Output for Tables (Version 0.1.0)
2022
tagcloud : Tag Clouds (Version 0.6)
2013
tame : Timing, Anatomical, Therapeutic and Chemical Based Medication Clustering (Version 0.0.1)
2023
targeted : Targeted Inference (Version 0.5)
2020
tci : Target Controlled Infusion (TCI) (Version 0.2.0)
2021
tclust : Robust Trimmed Clustering (Version 2.0-5)
2010
tdROC : Nonparametric Estimation of Time-Dependent ROC, Brier Score, and Survival Difference from Right Censored Time-to-Event Data with or without Competing Risks (Version 2.0)
2016
tdata : Prepare Your Time-Series Data for Further Analysis (Version 0.3.0)
2023
templateICAr : Estimate Brain Networks and Connectivity with ICA and Empirical Priors (Version 0.8.8)
2022
tensorBSS : Blind Source Separation Methods for Tensor-Valued Observations (Version 0.3.9)
2016
tensorMiss : Handle Missing Tensor Data with C++ Integration (Version 1.1.1)
2024
tergmLite : Fast Simulation of Simple Temporal Exponential Random Graph Models (Version 2.6.1)
2020
terminaldigits : Tests of Uniformity and Independence for Terminal Digits (Version 0.1.0)
2022
terra : Spatial Data Analysis (Version 1.7-83)
2020
terrainmeshr : Triangulate and Simplify 3D Terrain Meshes (Version 0.1.0)
2020
tesseract : Open Source OCR Engine (Version 5.2.2)
2016
testforDEP : Dependence Tests for Two Variables (Version 0.2.0)
2017
tetrascatt : Acoustic Scattering for Complex Shapes by Using the DWBA (Version 0.1.1)
2023
texmex : Statistical Modelling of Extreme Values (Version 2.4.9)
2010
text.alignment : Text Alignment with Smith-Waterman (Version 0.1.4)
2020
text2vec : Modern Text Mining Framework for R (Version 0.6.4)
2016
textTinyR : Text Processing for Small or Big Data Files (Version 1.1.8)
2017
textmineR : Functions for Text Mining and Topic Modeling (Version 3.0.5)
2015
textreg : n-Gram Text Regression, aka Concise Comparative Summarization (Version 0.1.5)
2014
textreuse : Detect Text Reuse and Document Similarity (Version 0.1.5)
2015
tfCox : Fits Piecewise Polynomial with Data-Adaptive Knots in Cox Model (Version 0.1.0)
2019
tfarima : Transfer Function and ARIMA Models (Version 0.3.2)
2020
tfevents : Write Events for 'TensorBoard' (Version 0.0.4)
2023
tglkmeans : Efficient Implementation of K-Means++ Algorithm (Version 0.5.5)
2022
thunder : Computation and Visualisation of Atmospheric Convective Parameters (Version 1.1.3)
2021
thurstonianIRT : Thurstonian IRT Models (Version 0.12.5)
2019
tibbletime : Time Aware Tibbles (Version 0.1.8)
2017
tidyCpp : Tidy C++ Header-Only Definitions for Parts of the C API of R (Version 0.0.7)
2020
tidygenomics : Tidy Verbs for Dealing with Genomic Data Frames (Version 0.1.2)
2017
tidylda : Latent Dirichlet Allocation Using 'tidyverse' Conventions (Version 0.0.5)
2021
tidysq : Tidy Processing and Analysis of Biological Sequences (Version 1.2.2)
2021
tidyxl : Read Untidy Excel Files (Version 1.0.10)
2017
tiledb : Modern Database Engine for Complex Data Based on Multi-Dimensional Arrays (Version 0.30.2)
2020
timeDF : Subset and Flag Data Frames with Times by the Use of Periods (Version 0.9.1)
2024
tinycodet : Functions to Help in your Coding Etiquette (Version 0.5.3)
2023
tipsae : Tools for Handling Indices and Proportions in Small Area Estimation (Version 1.0.3)
2022
tlars : The T-LARS Algorithm: Early-Terminated Forward Variable Selection (Version 1.0.1)
2022
tlrmvnmvt : Low-Rank Methods for MVN and MVT Probabilities (Version 1.1.2)
2019
tm : Text Mining Package (Version 0.7-14)
2007
tmbstan : MCMC Sampling from 'TMB' Model Object using 'Stan' (Version 1.0.91)
2017
tmt : Estimation of the Rasch Model for Multistage Tests (Version 0.3.4-0)
2019
tmvtnsim : Truncated Multivariate Normal and t Distribution Simulation (Version 0.1.3)
2022
tokenbrowser : Create Full Text Browsers from Annotated Token Lists (Version 0.1.5)
2019
tokenizers.bpe : Byte Pair Encoding Text Tokenization (Version 0.1.3)
2019
tokenizers : Fast, Consistent Tokenization of Natural Language Text (Version 0.3.0)
2016
torch : Tensors and Neural Networks with 'GPU' Acceleration (Version 0.13.0)
2020
torchvisionlib : Additional Operators for Image Models (Version 0.5.0)
2022
touch : Tools of Utilization and Cost in Healthcare (Version 0.1-6)
2016
tracerer : Tracer from R (Version 2.2.3)
2018
trackdem : Particle Tracking and Demography (Version 0.7.2)
2017
transmdl : Semiparametric Transformation Models (Version 0.1.0)
2021
transport : Computation of Optimal Transport Plans and Wasserstein Distances (Version 0.15-4)
2014
tree.interpreter : Random Forest Prediction Decomposition and Feature Importance Measure (Version 0.1.1)
2019
treenomial : Comparison of Trees using a Tree Defining Polynomial (Version 1.1.4)
2019
treeshap : Compute SHAP Values for Your Tree-Based Models Using the 'TreeSHAP' Algorithm (Version 0.3.1)
2023
treespace : Statistical Exploration of Landscapes of Phylogenetic Trees (Version 1.1.4.3)
2017
treestats : Phylogenetic Tree Statistics (Version 1.70.5)
2024
trialr : Clinical Trial Designs in 'rstan' (Version 0.1.6)
2017
triebeard : 'Radix' Trees in 'Rcpp' (Version 0.4.1)
2016
trtswitch : Treatment Switching (Version 0.1.1)
2024
truncnormbayes : Estimates Moments for a Truncated Normal Distribution using 'Stan' (Version 0.0.3)
2022
trustOptim : Trust Region Optimization for Nonlinear Functions with Sparse Hessians (Version 0.8.7.3)
2012
tsBSS : Blind Source Separation and Supervised Dimension Reduction for Time Series (Version 1.0.0)
2015
tsdistributions : Location Scale Standardized Distributions (Version 1.0.2)
2024
tsfgrnn : Time Series Forecasting Using GRNN (Version 1.0.5)
2019
tsfknn : Time Series Forecasting Using Nearest Neighbors (Version 0.6.0)
2018
tsgarch : Univariate GARCH Models (Version 1.0.3)
2024
tsmp : Time Series with Matrix Profile (Version 0.4.15)
2018
tsnet : Fitting, Comparing, and Visualizing Networks Based on Time Series Data (Version 0.1.0)
2024
ttbary : Barycenter Methods for Spatial Point Patterns (Version 0.3-1)
2019
tvR : Total Variation Regularization (Version 0.3.2)
2017
twangContinuous : Toolkit for Weighting and Analysis of Nonequivalent Groups - Continuous Exposures (Version 1.0.0)
2021
twdtw : Time-Weighted Dynamic Time Warping (Version 1.0-1)
2023
twingp : A Fast Global-Local Gaussian Process Approximation (Version 1.0.0)
2024
twinning : Data Twinning (Version 1.0)
2022
ubms : Bayesian Models for Data from Unmarked Animals using 'Stan' (Version 1.2.7)
2021
udpipe : Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit (Version 0.8.11)
2017
ugomquantreg : Quantile Regression Modeling for Unit-Gompertz Responses (Version 1.0.0)
2021
ulid : Generate Universally Unique 'Lexicographically' 'Sortable' Identifiers (Version 0.4.0)
2019
umap : Uniform Manifold Approximation and Projection (Version 0.2.10.0)
2018
understandBPMN : Calculator of Understandability Metrics for BPMN (Version 1.1.1)
2018
ungroup : Penalized Composite Link Model for Efficient Estimation of Smooth Distributions from Coarsely Binned Data (Version 1.4.4)
2018
unine : Unine Light Stemmer (Version 0.2.0)
2019
unitquantreg : Parametric Quantile Regression Models for Bounded Data (Version 0.0.6)
2022
units : Measurement Units for R Vectors (Version 0.8-5)
2016
unmarked : Models for Data from Unmarked Animals (Version 1.4.3)
2010
unsystation : Stationarity Test Based on Unsystematic Sub-Sampling (Version 0.2.0)
2016
updog : Flexible Genotyping for Polyploids (Version 2.1.5)
2018
urltools : Vectorised Tools for URL Handling and Parsing (Version 1.7.3)
2014
uwot : The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction (Version 0.2.2)
2019
vMF : Sampling from the von Mises-Fisher Distribution (Version 0.0.3)
2022
valr : Genome Interval Arithmetic (Version 0.8.2)
2016
vapour : Access to the 'Geospatial Data Abstraction Library' ('GDAL') (Version 0.10.0)
2018
varband : Variable Banding of Large Precision Matrices (Version 0.9.0)
2016
varbvs : Large-Scale Bayesian Variable Selection Using Variational Methods (Version 2.6-10)
2012
vasicekreg : Regression Modeling Using Vasicek Distribution (Version 1.0.1)
2021
vcfppR : Rapid Manipulation of the Variant Call Format (VCF) (Version 0.6.0)
2023
vcfR : Manipulate and Visualize VCF Data (Version 1.15.0)
2016
vcpen : Penalized Variance Components Analysis (Version 1.9)
2020
vectorwavelet : Vector Wavelet Coherence for Multiple Time Series (Version 0.1.0)
2021
vennplot : Venn Diagrams in 2D and 3D (Version 1.0)
2017
vglmer : Variational Inference for Hierarchical Generalized Linear Models (Version 1.0.6)
2022
viewscape : Viewscape Analysis (Version 2.0.0)
2024
vinereg : D-Vine Quantile Regression (Version 0.10.0)
2018
viscomplexr : Phase Portraits of Functions in the Complex Number Plane (Version 1.1.1)
2020
visit : Vaccine Phase I Design with Simultaneous Evaluation of Immunogenicity and Toxicity (Version 2.2)
2019
vita : Variable Importance Testing Approaches (Version 1.0.0)
2015
vol2birdR : Vertical Profiles of Biological Signals in Weather Radar Data (Version 1.0.5)
2023
volesti : Volume Approximation and Sampling of Convex Polytopes (Version 1.1.2-8)
2019
vsgoftest : Goodness-of-Fit Tests Based on Kullback-Leibler Divergence (Version 1.0-1)
2018
wCorr : Weighted Correlations (Version 1.9.8)
2016
walker : Bayesian Generalized Linear Models with Time-Varying Coefficients (Version 1.0.10)
2017
warbleR : Streamline Bioacoustic Analysis (Version 1.1.32)
2015
waspr : Wasserstein Barycenters of Subset Posteriors (Version 1.0.1)
2020
watson : Fitting and Simulating Mixtures of Watson Distributions (Version 0.4)
2022
wav : Read and Write WAV Files (Version 0.1.0)
2022
wbsd : Wild Bootstrap Size Diagnostics (Version 1.0.0)
2020
wbsts : Multiple Change-Point Detection for Nonstationary Time Series (Version 2.1)
2015
wdm : Weighted Dependence Measures (Version 0.2.4)
2018
webreadr : Tools for Reading Formatted Access Log Files (Version 0.4.0)
2015
wehoop : Access Women's Basketball Play by Play Data (Version 2.1.0)
2021
weibulltools : Statistical Methods for Life Data Analysis (Version 2.1.0)
2018
whoa : Evaluation of Genotyping Error in Genotype-by-Sequencing Data (Version 0.0.2)
2019
winputall : Variable Input Allocation Among Crops (Version 1.0.1)
2024
wkutils : Utilities for Well-Known Geometry Vectors (Version 0.1.3)
2020
womblR : Spatiotemporal Boundary Detection Model for Areal Unit Data (Version 1.0.5)
2017
word2vec : Distributed Representations of Words (Version 0.4.0)
2020
wordcloud : Word Clouds (Version 2.6)
2011
wordspace : Distributional Semantic Models in R (Version 0.2-8)
2016
wowa : Weighted Ordered Weighted Average (Version 1.0.2)
2021
wrMisc : Analyze Experimental High-Throughput (Omics) Data (Version 1.15.2)
2019
wrswoR : Weighted Random Sampling without Replacement (Version 1.1.1)
2016
wru : Who are You? Bayesian Prediction of Racial Category Using Surname, First Name, Middle Name, and Geolocation (Version 3.0.3)
2015
wsrf : Weighted Subspace Random Forest for Classification (Version 1.7.30)
2014
wv : Wavelet Variance (Version 0.1.2)
2019
xdcclarge : Estimating a (c)DCC-GARCH Model in Large Dimensions (Version 0.1.0)
2018
xmlwriter : Fast and Elegant XML Generation (Version 0.1.1)
2024
xplorerr : Tools for Interactive Data Exploration (Version 0.2.0)
2019
xrnet : Hierarchical Regularized Regression (Version 1.0.0)
2020
xslt : Extensible Style-Sheet Language Transformations (Version 1.4.6)
2017
xutils : Utility Functions of Fangzhou Xie (Version 0.0.2)
2021
ycevo : Nonparametric Estimation of the Yield Curve Evolution (Version 0.2.1)
2022
yuima : The YUIMA Project Package for SDEs (Version 1.15.27)
2014
zcurve : An Implementation of Z-Curves (Version 2.4.2)
2020
zebu : Local Association Measures (Version 0.2.2.0)
2016
zic : Bayesian Inference for Zero-Inflated Count Models (Version 0.9.1)
2009
zlib : Compression and Decompression (Version 1.0.3)
2023
zoid : Bayesian Zero-and-One Inflated Dirichlet Regression Modelling (Version 1.3.1)
2021
ztpln : Zero-Truncated Poisson Lognormal Distribution (Version 0.1.2)
2020
Showing 1-3129 of 3129
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