R Package Scholar
26,500
Referenced by ⇅ Year
bayesbr: Beta Regression on a Bayesian Model (Version 0.0.1.0)

2020
DAMisc: Dave Armstrong"s Miscellaneous Functions (Version 1.7.2)

2010
dfpk: Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials (Version 3.5.1)

2016
ggfan: Summarise a Distribution Through Coloured Intervals (Version 0.1.3)

2017
gppm: Gaussian Process Panel Modeling (Version 0.2.0)

2018
MapeBay: Multivariate Analysis of Variance Panel, PERMANOVA and Bayesian (Version 0.1.0)

2021
psrwe: PS-Integrated Methods for Incorporating RWE in Clinical Studies (Version 3.1)

2020
rmdcev: Kuhn-Tucker and Multiple Discrete-Continuous Extreme Value Models (Version 1.2.5)

2019
spatialfusion: Multivariate Analysis of Spatial Data Using a Unifying Spatial Fusion Framework (Version 0.6-6)

2020
expertsurv: Incorporate Expert Opinion with Parametric Survival Models (Version 1.3.0)

2023
MetaStan: Bayesian Meta-Analysis via 'Stan' (Version 1.0.0)

2018
edstan: Stan Models for Item Response Theory (Version 1.0.6)

2016
eggCounts: Hierarchical Modelling of Faecal Egg Counts (Version 2.4)

2013
AovBay: Classic, Nonparametric and Bayesian One-Way Analysis of Variance Panel (Version 0.1.0)

2021
BANOVA: Hierarchical Bayesian ANOVA Models (Version 1.2.1)

2014
BCEA: Bayesian Cost Effectiveness Analysis (Version 2.4.6)

2012
BINtools: Bayesian BIN (Bias, Information, Noise) Model of Forecasting (Version 0.2.0)

2021
BPrinStratTTE: Causal Effects in Principal Strata Defined by Antidrug Antibodies (Version 0.0.7)

2023
BayesGmed: Bayesian Causal Mediation Analysis using 'Stan' (Version 0.0.3)

2023
BayesGrowth: Estimate Fish Growth Using MCMC Analysis (Version 1.0.0)

2023
BayesPostEst: Generate Postestimation Quantities for Bayesian MCMC Estimation (Version 0.3.2)

2019
BayesSenMC: Different Models of Posterior Distributions of Adjusted Odds Ratio (Version 0.1.5)

2019
BayesTools: Tools for Bayesian Analyses (Version 0.2.17)

2021
BayesianPlatformDesignTimeTrend: Simulate and Analyse Bayesian Platform Trial with Time Trend (Version 1.2.3)

2023
BeeGUTS: General Unified Threshold Model of Survival for Bees using Bayesian Inference (Version 1.3.0)

2022
Bernadette: Bayesian Inference and Model Selection for Stochastic Epidemics (Version 1.1.5)

2023
CARME: CAR-MM Modelling in Stan (Version 0.1.1)

2023
CNVRG: Dirichlet Multinomial Modeling of Relative Abundance Data (Version 1.0.0)

2020
CausalQueries: Make, Update, and Query Binary Causal Models (Version 1.1.1)

2020
DCPO: Dynamic Comparative Public Opinion (Version 0.5.3)

2020
DHARMa: Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models (Version 0.4.7)

2016
DrBats: Data Representation: Bayesian Approach That's Sparse (Version 0.1.6)

2016
EcoEnsemble: A General Framework for Combining Ecosystem Models (Version 1.1.0)

2022
EloSteepness: Bayesian Dominance Hierarchy Steepness via Elo Rating and David's Scores (Version 0.5.0)

2022
EpiNow2: Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters (Version 1.6.0)

2020
FlexReg: Regression Models for Bounded Continuous and Discrete Responses (Version 1.3.0)

2020
GPP: Gaussian Process Projection (Version 0.1)

2020
GPRMortality: Gaussian Process Regression for Mortality Rates (Version 0.1.0)

2018
GUD: Bayesian Modal Regression Based on the GUD Family (Version 1.0.2)

2024
HCT: Calculates Significance Criteria and Power for a Single Arm Trial (Version 0.1.3)

2018
HuraultMisc: Guillem Hurault Functions' Library (Version 1.1.1)

2021
JMbayes: Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach (Version 0.8-85)

2012
LMMELSM: Fit Latent Multivariate Mixed Effects Location Scale Models (Version 0.2.0)

2021
MADPop: MHC Allele-Based Differencing Between Populations (Version 1.1.7)

2018
MCMCvis: Tools to Visualize, Manipulate, and Summarize MCMC Output (Version 0.16.3)

2016
MIRES: Measurement Invariance Assessment Using Random Effects Models and Shrinkage (Version 0.1.0)

2021
MIXFIM: Evaluation of the FIM in NLMEMs using MCMC (Version 1.1)

2015
OncoBayes2: Bayesian Logistic Regression for Oncology Dose-Escalation Trials (Version 0.8-9)

2019
PStrata: Principal Stratification Analysis in R (Version 0.0.5)

2023
PoolTestR: Prevalence and Regression for Pool-Tested (Group-Tested) Data (Version 0.1.3)

2021
PosteriorBootstrap: Non-Parametric Sampling with Parallel Monte Carlo (Version 0.1.2)

2019
ProbBreed: Probability Theory for Selecting Candidates in Plant Breeding (Version 1.0.4.2)

2023
RBesT: R Bayesian Evidence Synthesis Tools (Version 1.7-3)

2017
Rlgt: Bayesian Exponential Smoothing Models with Trend Modifications (Version 0.2-2)

2019
RoBTT: Robust Bayesian T-Test (Version 1.3.0)

2022
SSNbayes: Bayesian Spatio-Temporal Analysis in Stream Networks (Version 0.0.3)

2021
SoupX: Single Cell mRNA Soup eXterminator (Version 1.6.2)

2020
StanHeaders: C++ Header Files for Stan (Version 2.32.10)

2015
StanMoMo: Bayesian Mortality Modelling with 'Stan' (Version 1.2.0)

2021
TriDimRegression: Bayesian Statistics for 2D/3D Transformations (Version 1.0.2)

2021
WhiteLabRt: Novel Methods for Reproduction Number Estimation, Back-Calculation, and Forecasting (Version 1.0.1)

2024
YPBP: Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials (Version 0.0.1)

2020
YPPE: Yang and Prentice Model with Piecewise Exponential Baseline Distribution (Version 1.0.1)

2019
adnuts: No-U-Turn MCMC Sampling for 'ADMB' Models (Version 1.1.2)

2018
alien: Estimate Invasive and Alien Species (IAS) Introduction Rates (Version 1.0.2)

2024
baggr: Bayesian Aggregate Treatment Effects (Version 0.7.8)

2019
bakR: Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets (Version 1.0.1)

2022
baldur: Bayesian Hierarchical Modeling for Label-Free Proteomics (Version 0.0.3)

2023
bayclumpr: Bayesian Analysis of Clumped Isotope Datasets (Version 0.1.0)

2023
bayes4psy: User Friendly Bayesian Data Analysis for Psychology (Version 1.2.12)

2019
bayesGAM: Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo (Version 0.0.2)

2020
bayesImageS: Bayesian Methods for Image Segmentation using a Potts Model (Version 0.6-1)

2016
bayesZIB: Bayesian Zero-Inflated Bernoulli Regression Model (Version 0.0.5)

2021
bayesdfa: Bayesian Dynamic Factor Analysis (DFA) with 'Stan' (Version 1.3.3)

2018
bayesforecast: Bayesian Time Series Modeling with Stan (Version 1.0.1)

2021
bayesian: Bindings for Bayesian TidyModels (Version 1.0.1)

2021
bayesnec: A Bayesian No-Effect- Concentration (NEC) Algorithm (Version 2.1.3.0)

2021
bayesplot: Plotting for Bayesian Models (Version 1.11.1)

2016
bayesvl: Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' (Version 0.8.5)

2019
bayestestR: Understand and Describe Bayesian Models and Posterior Distributions (Version 0.15.0)

2019
bbmix: Bayesian Model for Genotyping using RNA-Seq (Version 1.0.0)

2023
beanz: Bayesian Analysis of Heterogeneous Treatment Effect (Version 3.1)

2016
bellreg: Count Regression Models Based on the Bell Distribution (Version 0.0.2.2)

2020
bennu: Bayesian Estimation of Naloxone Kit Number Under-Reporting (Version 0.3.0)

2023
bistablehistory: Cumulative History Analysis for Bistable Perception Time Series (Version 1.1.2)

2021
bkmrhat: Parallel Chain Tools for Bayesian Kernel Machine Regression (Version 1.1.3)

2020
blavaan: Bayesian Latent Variable Analysis (Version 0.5-6)

2015
bmgarch: Bayesian Multivariate GARCH Models (Version 2.0.0)

2020
bmggum: Bayesian Multidimensional Generalized Graded Unfolding Model (Version 0.1.0)

2021
bmlm: Bayesian Multilevel Mediation (Version 1.3.15)

2016
bmscstan: Bayesian Multilevel Single Case Models using 'Stan' (Version 1.2.1.0)

2020
bmstdr: Bayesian Modeling of Spatio-Temporal Data with R (Version 0.7.9)

2022
breathteststan: Stan-Based Fit to Gastric Emptying Curves (Version 0.8.5)

2017
bridgesampling: Bridge Sampling for Marginal Likelihoods and Bayes Factors (Version 1.1-2)

2017
brms: Bayesian Regression Models using 'Stan' (Version 2.22.0)

2015
brms.mmrm: Bayesian MMRMs using 'brms' (Version 1.1.1)

2023
broom.mixed: Tidying Methods for Mixed Models (Version 0.2.9.6)

2018
brxx: Bayesian Test Reliability Estimation (Version 0.1.2)

2020
bsitar: Bayesian Super Imposition by Translation and Rotation Growth Curve Analysis (Version 0.2.1)

2023
bsynth: Bayesian Synthetic Control (Version 1.0)

2024
bws: Bayesian Weighted Sums (Version 0.1.0)

2022
cbq: Conditional Binary Quantile Models (Version 0.2.0.3)

2020
chkptstanr: Checkpoint MCMC Sampling with 'Stan' (Version 0.1.1)

2022
clinDR: Simulation and Analysis Tools for Clinical Dose Response Modeling (Version 2.4.1)

2017
cloneRate: Estimate Growth Rates from Phylogenetic Trees (Version 0.2.3)

2023
compareMCMCs: Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines (Version 0.6.0)

2022
conStruct: Models Spatially Continuous and Discrete Population Genetic Structure (Version 1.0.6)

2018
ctsem: Continuous Time Structural Equation Modelling (Version 3.10.1)

2015
dclone: Data Cloning and MCMC Tools for Maximum Likelihood Methods (Version 2.3-2)

2009
densEstBayes: Density Estimation via Bayesian Inference Engines (Version 1.0-2.2)

2020
dfped: Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies (Version 1.1)

2017
disbayes: Bayesian Multi-State Modelling of Chronic Disease Burden Data (Version 1.1.0)

2022
dsem: Fit Dynamic Structural Equation Models (Version 1.3.0)

2023
dynamite: Bayesian Modeling and Causal Inference for Multivariate Longitudinal Data (Version 1.5.2)

2022
eDNAjoint: Joint Modeling of Traditional and Environmental DNA Survey Data in a Bayesian Framework (Version 0.2)

2024
evidence: Analysis of Scientific Evidence Using Bayesian and Likelihood Methods (Version 0.8.10)

2018
fcirt: Forced Choice in Item Response Theory (Version 0.1.0)

2022
fergm: Estimation and Fit Assessment of Frailty Exponential Random Graph Models (Version 1.1.4)

2017
finalfit: Quickly Create Elegant Regression Results Tables and Plots when Modelling (Version 1.0.8)

2018
flocker: Flexible Occupancy Estimation with Stan (Version 1.0-0)

2024
flps: Fully-Latent Principal Stratification (Version 1.1.0)

2023
footBayes: Fitting Bayesian and MLE Football Models (Version 0.2.0)

2022
gastempt: Analyzing Gastric Emptying from MRI or Scintigraphy (Version 0.6.1)

2017
geostan: Bayesian Spatial Analysis (Version 0.7.0)

2022
glmmPen: High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) (Version 1.5.4.8)

2022
glmmfields: Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling (Version 0.1.8)

2018
glmmrBase: Generalised Linear Mixed Models in R (Version 0.10.5)

2022
greencrab.toolkit: Run 'Stan' Models to Interpret Green Crab Monitoring Assessments (Version 0.2)

2023
hBayesDM: Hierarchical Bayesian Modeling of Decision-Making Tasks (Version 1.2.1)

2016
hbamr: Hierarchical Bayesian Aldrich-McKelvey Scaling via 'Stan' (Version 2.3.2)

2023
historicalborrowlong: Longitudinal Bayesian Historical Borrowing Models (Version 0.1.0)

2022
hmmTMB: Fit Hidden Markov Models using Template Model Builder (Version 1.0.2)

2023
hsstan: Hierarchical Shrinkage Stan Models for Biomarker Selection (Version 0.8.2)

2019
hwep: Hardy-Weinberg Equilibrium in Polyploids (Version 2.0.2)

2021
iCARH: Integrative Conditional Autoregressive Horseshoe Model (Version 2.0.2.1)

2019
idem: Inference in Randomized Controlled Trials with Death and Missingness (Version 5.2)

2016
imt: Impact Measurement Toolkit (Version 1.0.0)

2024
isotracer: Isotopic Tracer Analysis Using MCMC (Version 1.1.6)

2021
jfa: Statistical Methods for Auditing (Version 0.7.2)

2020
lgpr: Longitudinal Gaussian Process Regression (Version 1.2.4)

2021
llbayesireg: The L-Logistic Bayesian Regression (Version 1.0.0)

2019
loo: Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models (Version 2.8.0)

2015
lorad: Lowest Radial Distance Method of Marginal Likelihood Estimation (Version 0.0.1.0)

2023
makemyprior: Intuitive Construction of Joint Priors for Variance Parameters (Version 1.2.2)

2021
measr: Bayesian Psychometric Measurement Using 'Stan' (Version 1.0.0)

2023
metaBMA: Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis (Version 0.6.9)

2017
metabias: Meta-Analysis for Within-Study and/or Across-Study Biases (Version 0.1.1)

2023
mice: Multivariate Imputation by Chained Equations (Version 3.16.0)

2006
miniLNM: Miniature Logistic-Normal Multinomial Models (Version 0.1.0)

2024
mlts: Multilevel Latent Time Series Models with 'R' and 'Stan' (Version 1.0.0)

2024
modeltime: The Tidymodels Extension for Time Series Modeling (Version 1.3.1)

2020
mpower: Power Analysis via Monte Carlo Simulation for Correlated Data (Version 0.1.0)

2022
mrbayes: Bayesian Summary Data Models for Mendelian Randomization Studies (Version 0.5.2)

2019
mrregression: Regression Analysis for Very Large Data Sets via Merge and Reduce (Version 1.0.0)

2020
multinma: Bayesian Network Meta-Analysis of Individual and Aggregate Data (Version 0.7.2)

2020
multipleDL: Addressing Detection Limits by Cumulative Probability Models (CPMs) (Version 1.0.0)

2023
mvgam: Multivariate (Dynamic) Generalized Additive Models (Version 1.1.3)

2024
neodistr: Neo-Normal Distribution (Version 0.1.1)

2024
networkscaleup: Network Scale-Up Models for Aggregated Relational Data (Version 0.1-2)

2022
oncomsm: Bayesian Multi-State Models for Early Oncology (Version 0.1.4)

2022
parTimeROC: Parametric Time-Dependent Receiver Operating Characteristic (Version 0.1.0)

2024
parameters: Processing of Model Parameters (Version 0.23.0)

2019
pcFactorStan: Stan Models for the Paired Comparison Factor Model (Version 1.5.4)

2019
pcvr: Plant Phenotyping and Bayesian Statistics (Version 1.0.0)

2024
pema: Penalized Meta-Analysis (Version 0.1.3)

2021
phacking: Sensitivity Analysis for p-Hacking in Meta-Analyses (Version 0.2.1)

2022
phylopairs: Comparative Analyses of Lineage-Pair Traits (Version 0.1.0)

2024
pivmet: Pivotal Methods for Bayesian Relabelling and k-Means Clustering (Version 0.6.0)

2018
pollimetry: Estimate Pollinator Body Size and Co-Varying Ecological Traits (Version 1.0.1)

2018
postpack: Utilities for Processing Posterior Samples Stored in 'mcmc.lists' (Version 0.5.4)

2020
priorsense: Prior Diagnostics and Sensitivity Analysis (Version 1.0.3)

2024
prome: Patient-Reported Outcome Data Analysis with Stan (Version 1.9.1.0)

2022
prophet: Automatic Forecasting Procedure (Version 1.0)

2017
psBayesborrow: Bayesian Information Borrowing with Propensity Score Matching (Version 1.1.0)

2024
publipha: Bayesian Meta-Analysis with Publications Bias and P-Hacking (Version 0.1.2)

2020
rPBK: Inference and Prediction of Generic Physiologically-Based Kinetic Models (Version 0.2.4)

2022
rater: Statistical Models of Repeated Categorical Rating Data (Version 1.3.1)

2020
rbioacc: Inference and Prediction of ToxicoKinetic (TK) Models (Version 1.2.1)

2021
rbmi: Reference Based Multiple Imputation (Version 1.3.0)

2022
rcbayes: Estimate Rogers-Castro Migration Age Schedules with Bayesian Models (Version 0.2.0)

2021
rmBayes: Performing Bayesian Inference for Repeated-Measures Designs (Version 0.1.16)

2021
rmsb: Bayesian Regression Modeling Strategies (Version 1.1-1)

2020
rmstBayespara: Bayesian Restricted Mean Survival Time for Cluster Effect (Version 0.1.0)

2024
rstanarm: Bayesian Applied Regression Modeling via Stan (Version 2.32.1)

2016
rstanbdp: Bayesian Deming Regression for Method Comparison (Version 0.0.3)

2024
rstanemax: Emax Model Analysis with 'Stan' (Version 0.1.5)

2019
rstantools: Tools for Developing R Packages Interfacing with 'Stan' (Version 2.4.0)

2016
rts2: Real-Time Disease Surveillance (Version 0.7.6)

2022
runMCMCbtadjust: Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters (Version 1.1.2)

2023
serosv: Model Infectious Disease Parameters from Serosurveys (Version 1.0.1)

2024
shinybrms: Graphical User Interface ('shiny' App) for 'brms' (Version 1.8.0)

2020
shinystan: Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models (Version 2.6.0)

2015
spsurv: Bernstein Polynomial Based Semiparametric Survival Analysis (Version 1.0.0)

2020
ssMousetrack: Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan (Version 1.1.6)

2018
survHE: Survival Analysis in Health Economic Evaluation (Version 2.0.2)

2017
surveil: Time Series Models for Disease Surveillance (Version 0.3.0)

2021
survstan: Fitting Survival Regression Models via 'Stan' (Version 0.0.7.1)

2023
thurstonianIRT: Thurstonian IRT Models (Version 0.12.5)

2019
tidybayes: Tidy Data and 'Geoms' for Bayesian Models (Version 3.0.7)

2018
tipsae: Tools for Handling Indices and Proportions in Small Area Estimation (Version 1.0.3)

2022
tmbstan: MCMC Sampling from 'TMB' Model Object using 'Stan' (Version 1.0.91)

2017
trialr: Clinical Trial Designs in 'rstan' (Version 0.1.6)

2017
truncnormbayes: Estimates Moments for a Truncated Normal Distribution using 'Stan' (Version 0.0.3)

2022
tsnet: Fitting, Comparing, and Visualizing Networks Based on Time Series Data (Version 0.1.0)

2024
ubms: Bayesian Models for Data from Unmarked Animals using 'Stan' (Version 1.2.7)

2021
unifed: The Unifed Distribution (Version 1.1.6)

2019
varian: Variability Analysis in R (Version 0.2.2)

2015
visit: Vaccine Phase I Design with Simultaneous Evaluation of Immunogenicity and Toxicity (Version 2.2)

2019
walker: Bayesian Generalized Linear Models with Time-Varying Coefficients (Version 1.0.10)

2017
winputall: Variable Input Allocation Among Crops (Version 1.0.1)

2024
zoid: Bayesian Zero-and-One Inflated Dirichlet Regression Modelling (Version 1.3.1)

2021

RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN). Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.

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