Referenced by ⇅
Year
bayesbr : Beta Regression on a Bayesian Model (Version 0.0.1.0)
2020
DAMisc : Dave Armstrong"s Miscellaneous Functions (Version 1.7.2)
2010
dfpk : Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for
Phase I Clinical Trials (Version 3.5.1)
2016
ggfan : Summarise a Distribution Through Coloured Intervals (Version 0.1.3)
2017
gppm : Gaussian Process Panel Modeling (Version 0.2.0)
2018
MapeBay : Multivariate Analysis of Variance Panel, PERMANOVA and Bayesian (Version 0.1.0)
2021
psrwe : PS-Integrated Methods for Incorporating RWE in Clinical Studies (Version 3.1)
2020
rmdcev : Kuhn-Tucker and Multiple Discrete-Continuous Extreme Value
Models (Version 1.2.5)
2019
spatialfusion : Multivariate Analysis of Spatial Data Using a Unifying Spatial
Fusion Framework (Version 0.6-6)
2019
expertsurv : Incorporate Expert Opinion with Parametric Survival Models (Version 1.3.0)
2023
bayesGAM : Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo (Version 0.0.2)
2020
breathteststan : Stan-Based Fit to Gastric Emptying Curves (Version 0.8.8)
2017
bridgesampling : Bridge Sampling for Marginal Likelihoods and Bayes Factors (Version 1.1-2)
2017
brms : Bayesian Regression Models using 'Stan' (Version 2.22.0)
2015
brms.mmrm : Bayesian MMRMs using 'brms' (Version 1.1.1)
2023
broom.mixed : Tidying Methods for Mixed Models (Version 0.2.9.6)
2018
brxx : Bayesian Test Reliability Estimation (Version 0.1.2)
2020
bsitar : Bayesian Super Imposition by Translation and Rotation Growth Curve Analysis (Version 0.2.1)
2023
bsynth : Bayesian Synthetic Control (Version 1.0)
2024
bws : Bayesian Weighted Sums (Version 0.1.0)
2022
makemyprior : Intuitive Construction of Joint Priors for Variance Parameters (Version 1.2.2)
2021
AovBay : Classic, Nonparametric and Bayesian One-Way Analysis of Variance Panel (Version 0.1.0)
2021
BANOVA : Hierarchical Bayesian ANOVA Models (Version 1.2.1)
2014
BCEA : Bayesian Cost Effectiveness Analysis (Version 2.4.6)
2012
BINtools : Bayesian BIN (Bias, Information, Noise) Model of Forecasting (Version 0.2.0)
2021
BPrinStratTTE : Causal Effects in Principal Strata Defined by Antidrug Antibodies (Version 0.0.7)
2023
BayesGP : Efficient Implementation of Gaussian Process in Bayesian Hierarchical Models (Version 0.1.3)
2024
BayesGmed : Bayesian Causal Mediation Analysis using 'Stan' (Version 0.0.3)
2023
BayesGrowth : Estimate Fish Growth Using MCMC Analysis (Version 1.0.0)
2023
BayesPostEst : Generate Postestimation Quantities for Bayesian MCMC Estimation (Version 0.3.2)
2019
BayesSenMC : Different Models of Posterior Distributions of Adjusted Odds Ratio (Version 0.1.5)
2019
BayesTools : Tools for Bayesian Analyses (Version 0.2.17)
2021
BayesianFitForecast : Bayesian Parameter Estimation and Forecasting for Epidemiological Models (Version 1.0.0)
2024
BayesianPlatformDesignTimeTrend : Simulate and Analyse Bayesian Platform Trial with Time Trend (Version 1.2.3)
2023
BeeGUTS : General Unified Threshold Model of Survival for Bees using Bayesian Inference (Version 1.3.0)
2022
Bernadette : Bayesian Inference and Model Selection for Stochastic Epidemics (Version 1.1.5)
2023
CARME : CAR-MM Modelling in Stan (Version 0.1.1)
2023
CNVRG : Dirichlet Multinomial Modeling of Relative Abundance Data (Version 1.0.0)
2020
CausalQueries : Make, Update, and Query Binary Causal Models (Version 1.3.0)
2020
DCPO : Dynamic Comparative Public Opinion (Version 0.5.3)
2020
DHARMa : Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models (Version 0.4.7)
2016
DrBats : Data Representation: Bayesian Approach That's Sparse (Version 0.1.6)
2016
EcoEnsemble : A General Framework for Combining Ecosystem Models (Version 1.1.0)
2022
EloSteepness : Bayesian Dominance Hierarchy Steepness via Elo Rating and David's Scores (Version 0.5.0)
2022
EpiNow2 : Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters (Version 1.6.1)
2020
FlexReg : Regression Models for Bounded Continuous and Discrete Responses (Version 1.3.0)
2020
GPP : Gaussian Process Projection (Version 0.1)
2020
GPRMortality : Gaussian Process Regression for Mortality Rates (Version 0.1.0)
2018
GUD : Bayesian Modal Regression Based on the GUD Family (Version 1.0.2)
2024
HCT : Calculates Significance Criteria and Power for a Single Arm Trial (Version 0.1.3)
2018
HuraultMisc : Guillem Hurault Functions' Library (Version 1.1.1)
2021
JMbayes : Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach (Version 0.8-85)
2012
LMMELSM : Fit Latent Multivariate Mixed Effects Location Scale Models (Version 0.2.0)
2021
MADPop : MHC Allele-Based Differencing Between Populations (Version 1.1.7)
2017
MCMCvis : Tools to Visualize, Manipulate, and Summarize MCMC Output (Version 0.16.3)
2016
MIRES : Measurement Invariance Assessment Using Random Effects Models and Shrinkage (Version 0.1.0)
2021
MIXFIM : Evaluation of the FIM in NLMEMs using MCMC (Version 1.1)
2015
MetaStan : Bayesian Meta-Analysis via 'Stan' (Version 1.0.0)
2018
OncoBayes2 : Bayesian Logistic Regression for Oncology Dose-Escalation Trials (Version 0.8-9)
2019
PStrata : Principal Stratification Analysis in R (Version 0.0.5)
2023
PoolTestR : Prevalence and Regression for Pool-Tested (Group-Tested) Data (Version 0.2.0)
2021
PosteriorBootstrap : Non-Parametric Sampling with Parallel Monte Carlo (Version 0.1.2)
2019
ProbBreed : Probability Theory for Selecting Candidates in Plant Breeding (Version 1.0.4.4)
2023
RBesT : R Bayesian Evidence Synthesis Tools (Version 1.7-4)
2017
RegDDM : Generalized Linear Regression with DDM (Version 1.0)
2024
Rlgt : Bayesian Exponential Smoothing Models with Trend Modifications (Version 0.2-2)
2019
RoBTT : Robust Bayesian T-Test (Version 1.3.1)
2022
SMNlmec : Scale Mixture of Normal Distribution in Linear Mixed-Effects Model (Version 0.1.0)
2024
SSNbayes : Bayesian Spatio-Temporal Analysis in Stream Networks (Version 0.0.3)
2021
SoupX : Single Cell mRNA Soup eXterminator (Version 1.6.2)
2020
StanHeaders : C++ Header Files for Stan (Version 2.32.10)
2015
StanMoMo : Bayesian Mortality Modelling with 'Stan' (Version 1.2.0)
2021
TriDimRegression : Bayesian Statistics for 2D/3D Transformations (Version 1.0.2)
2021
WhiteLabRt : Novel Methods for Reproduction Number Estimation, Back-Calculation, and Forecasting (Version 1.0.1)
2024
YPBP : Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials (Version 0.0.1)
2020
YPPE : Yang and Prentice Model with Piecewise Exponential Baseline Distribution (Version 1.0.1)
2019
adnuts : No-U-Turn MCMC Sampling for 'ADMB' Models (Version 1.1.2)
2018
alien : Estimate Invasive and Alien Species (IAS) Introduction Rates (Version 1.0.2)
2024
baggr : Bayesian Aggregate Treatment Effects (Version 0.7.8)
2019
bakR : Analyze and Compare Nucleotide Recoding RNA Sequencing Datasets (Version 1.0.1)
2022
baldur : Bayesian Hierarchical Modeling for Label-Free Proteomics (Version 0.0.3)
2023
bayclumpr : Bayesian Analysis of Clumped Isotope Datasets (Version 0.1.0)
2023
bayes4psy : User Friendly Bayesian Data Analysis for Psychology (Version 1.2.12)
2019
bayesImageS : Bayesian Methods for Image Segmentation using a Potts Model (Version 0.6-1)
2016
bayesZIB : Bayesian Zero-Inflated Bernoulli Regression Model (Version 0.0.5)
2021
bayesdfa : Bayesian Dynamic Factor Analysis (DFA) with 'Stan' (Version 1.3.3)
2018
bayesforecast : Bayesian Time Series Modeling with Stan (Version 1.0.1)
2021
bayesian : Bindings for Bayesian TidyModels (Version 1.0.1)
2021
bayeslist : Bayesian Analysis of List Experiments with Prior Information (Version 0.0.1.4)
2024
bayesnec : A Bayesian No-Effect- Concentration (NEC) Algorithm (Version 2.1.3.0)
2021
bayesplot : Plotting for Bayesian Models (Version 1.11.1)
2016
bayesvl : Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' (Version 0.8.5)
2019
bayestestR : Understand and Describe Bayesian Models and Posterior Distributions (Version 0.15.0)
2019
bbmix : Bayesian Model for Genotyping using RNA-Seq (Version 1.0.0)
2023
beanz : Bayesian Analysis of Heterogeneous Treatment Effect (Version 3.1)
2016
bellreg : Count Regression Models Based on the Bell Distribution (Version 0.0.2.2)
2020
bennu : Bayesian Estimation of Naloxone Kit Number Under-Reporting (Version 0.3.0)
2023
bistablehistory : Cumulative History Analysis for Bistable Perception Time Series (Version 1.1.2)
2021
bkmrhat : Parallel Chain Tools for Bayesian Kernel Machine Regression (Version 1.1.3)
2020
blavaan : Bayesian Latent Variable Analysis (Version 0.5-6)
2015
bmgarch : Bayesian Multivariate GARCH Models (Version 2.0.0)
2020
bmggum : Bayesian Multidimensional Generalized Graded Unfolding Model (Version 0.1.0)
2021
bmlm : Bayesian Multilevel Mediation (Version 1.3.15)
2016
bmscstan : Bayesian Multilevel Single Case Models using 'Stan' (Version 1.2.1.0)
2020
bmstdr : Bayesian Modeling of Spatio-Temporal Data with R (Version 0.7.9)
2022
cbq : Conditional Binary Quantile Models (Version 0.2.0.3)
2020
chkptstanr : Checkpoint MCMC Sampling with 'Stan' (Version 0.1.1)
2022
clinDR : Simulation and Analysis Tools for Clinical Dose Response Modeling (Version 2.4.1)
2017
cloneRate : Estimate Growth Rates from Phylogenetic Trees (Version 0.2.3)
2023
compareMCMCs : Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines (Version 0.6.0)
2022
conStruct : Models Spatially Continuous and Discrete Population Genetic Structure (Version 1.0.6)
2018
ctsem : Continuous Time Structural Equation Modelling (Version 3.10.1)
2015
dclone : Data Cloning and MCMC Tools for Maximum Likelihood Methods (Version 2.3-2)
2009
densEstBayes : Density Estimation via Bayesian Inference Engines (Version 1.0-2.2)
2020
dfped : Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies (Version 1.1)
2017
disbayes : Bayesian Multi-State Modelling of Chronic Disease Burden Data (Version 1.1.0)
2022
dsem : Fit Dynamic Structural Equation Models (Version 1.3.0)
2023
dynamite : Bayesian Modeling and Causal Inference for Multivariate Longitudinal Data (Version 1.5.5)
2022
eDNAjoint : Joint Modeling of Traditional and Environmental DNA Survey Data in a Bayesian Framework (Version 0.2)
2024
edstan : Stan Models for Item Response Theory (Version 1.0.6)
2016
eggCounts : Hierarchical Modelling of Faecal Egg Counts (Version 2.4)
2013
evidence : Analysis of Scientific Evidence Using Bayesian and Likelihood Methods (Version 0.8.10)
2018
fcirt : Forced Choice in Item Response Theory (Version 0.1.0)
2022
fergm : Estimation and Fit Assessment of Frailty Exponential Random Graph Models (Version 1.1.4)
2017
finalfit : Quickly Create Elegant Regression Results Tables and Plots when Modelling (Version 1.0.8)
2018
flocker : Flexible Occupancy Estimation with Stan (Version 1.0-0)
2024
flps : Fully-Latent Principal Stratification (Version 1.1.0)
2023
footBayes : Fitting Bayesian and MLE Football Models (Version 0.2.0)
2022
gastempt : Analyzing Gastric Emptying from MRI or Scintigraphy (Version 0.6.2)
2017
geostan : Bayesian Spatial Analysis (Version 0.8.1)
2022
glmmPen : High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) (Version 1.5.4.8)
2022
glmmfields : Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling (Version 0.1.8)
2018
glmmrBase : Generalised Linear Mixed Models in R (Version 0.11.2)
2022
greencrab.toolkit : Run 'Stan' Models to Interpret Green Crab Monitoring Assessments (Version 0.2)
2023
hBayesDM : Hierarchical Bayesian Modeling of Decision-Making Tasks (Version 1.2.1)
2016
hbamr : Hierarchical Bayesian Aldrich-McKelvey Scaling via 'Stan' (Version 2.3.2)
2023
historicalborrowlong : Longitudinal Bayesian Historical Borrowing Models (Version 0.1.0)
2022
hmmTMB : Fit Hidden Markov Models using Template Model Builder (Version 1.0.2)
2023
hsstan : Hierarchical Shrinkage Stan Models for Biomarker Selection (Version 0.8.2)
2019
hwep : Hardy-Weinberg Equilibrium in Polyploids (Version 2.0.2)
2021
iCARH : Integrative Conditional Autoregressive Horseshoe Model (Version 2.0.2.1)
2019
idem : Inference in Randomized Controlled Trials with Death and Missingness (Version 5.2)
2016
imt : Impact Measurement Toolkit (Version 1.0.0)
2024
isotracer : Isotopic Tracer Analysis Using MCMC (Version 1.1.7)
2021
jfa : Statistical Methods for Auditing (Version 0.7.2)
2020
lgpr : Longitudinal Gaussian Process Regression (Version 1.2.4)
2021
llbayesireg : The L-Logistic Bayesian Regression (Version 1.0.0)
2019
loo : Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models (Version 2.8.0)
2015
lorad : Lowest Radial Distance Method of Marginal Likelihood Estimation (Version 0.0.1.0)
2023
measr : Bayesian Psychometric Measurement Using 'Stan' (Version 1.0.0)
2023
metaBMA : Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis (Version 0.6.9)
2017
metabias : Meta-Analysis for Within-Study and/or Across-Study Biases (Version 0.1.1)
2023
mice : Multivariate Imputation by Chained Equations (Version 3.17.0)
2006
miniLNM : Miniature Logistic-Normal Multinomial Models (Version 0.1.0)
2024
mlts : Multilevel Latent Time Series Models with 'R' and 'Stan' (Version 1.0.0)
2024
modeltime : The Tidymodels Extension for Time Series Modeling (Version 1.3.1)
2020
mpower : Power Analysis via Monte Carlo Simulation for Correlated Data (Version 0.1.0)
2022
mrbayes : Bayesian Summary Data Models for Mendelian Randomization Studies (Version 0.5.2)
2019
mrregression : Regression Analysis for Very Large Data Sets via Merge and Reduce (Version 1.0.0)
2020
multinma : Bayesian Network Meta-Analysis of Individual and Aggregate Data (Version 0.7.2)
2020
multipleDL : Addressing Detection Limits by Cumulative Probability Models (CPMs) (Version 1.0.0)
2023
mvgam : Multivariate (Dynamic) Generalized Additive Models (Version 1.1.3)
2024
neodistr : Neo-Normal Distribution (Version 0.1.1)
2024
networkscaleup : Network Scale-Up Models for Aggregated Relational Data (Version 0.1-2)
2022
oncomsm : Bayesian Multi-State Models for Early Oncology (Version 0.1.4)
2022
parTimeROC : Parametric Time-Dependent Receiver Operating Characteristic (Version 0.1.0)
2024
parameters : Processing of Model Parameters (Version 0.24.0)
2019
pcFactorStan : Stan Models for the Paired Comparison Factor Model (Version 1.5.4)
2019
pcvr : Plant Phenotyping and Bayesian Statistics (Version 1.1.1.0)
2024
pema : Penalized Meta-Analysis (Version 0.1.3)
2021
phacking : Sensitivity Analysis for p-Hacking in Meta-Analyses (Version 0.2.1)
2022
phylopairs : Comparative Analyses of Lineage-Pair Traits (Version 0.1.0)
2024
pivmet : Pivotal Methods for Bayesian Relabelling and k-Means Clustering (Version 0.6.0)
2018
pollimetry : Estimate Pollinator Body Size and Co-Varying Ecological Traits (Version 1.0.1)
2018
postpack : Utilities for Processing Posterior Samples Stored in 'mcmc.lists' (Version 0.5.4)
2020
priorsense : Prior Diagnostics and Sensitivity Analysis (Version 1.0.4)
2024
prome : Patient-Reported Outcome Data Analysis with Stan (Version 1.9.1.0)
2022
prophet : Automatic Forecasting Procedure (Version 1.0)
2017
psBayesborrow : Bayesian Information Borrowing with Propensity Score Matching (Version 1.1.0)
2024
publipha : Bayesian Meta-Analysis with Publications Bias and P-Hacking (Version 0.1.2)
2020
rPBK : Inference and Prediction of Generic Physiologically-Based Kinetic Models (Version 0.2.4)
2022
rater : Statistical Models of Repeated Categorical Rating Data (Version 1.3.1)
2020
rbioacc : Inference and Prediction of ToxicoKinetic (TK) Models (Version 1.2.1)
2021
rbmi : Reference Based Multiple Imputation (Version 1.3.1)
2022
rcbayes : Estimate Rogers-Castro Migration Age Schedules with Bayesian Models (Version 0.2.0)
2021
rmBayes : Performing Bayesian Inference for Repeated-Measures Designs (Version 0.1.16)
2021
rmsb : Bayesian Regression Modeling Strategies (Version 1.1-1)
2020
rmstBayespara : Bayesian Restricted Mean Survival Time for Cluster Effect (Version 0.1.0)
2024
rstanarm : Bayesian Applied Regression Modeling via Stan (Version 2.32.1)
2016
rstanbdp : Bayesian Deming Regression for Method Comparison (Version 0.0.3)
2024
rstanemax : Emax Model Analysis with 'Stan' (Version 0.1.7)
2019
rstantools : Tools for Developing R Packages Interfacing with 'Stan' (Version 2.4.0)
2016
rts2 : Real-Time Disease Surveillance (Version 0.7.7)
2022
runMCMCbtadjust : Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or 'greta' - While Adjusting Burn-in and Thinning Parameters (Version 1.1.2)
2023
serosv : Model Infectious Disease Parameters from Serosurveys (Version 1.0.1)
2024
shinybrms : Graphical User Interface ('shiny' App) for 'brms' (Version 1.8.0)
2020
shinystan : Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models (Version 2.6.0)
2015
spsurv : Bernstein Polynomial Based Semiparametric Survival Analysis (Version 1.0.0)
2020
ssMousetrack : Bayesian State-Space Modeling of Mouse-Tracking Experiments via Stan (Version 1.1.6)
2018
survHE : Survival Analysis in Health Economic Evaluation (Version 2.0.2)
2017
surveil : Time Series Models for Disease Surveillance (Version 0.3.0)
2021
survstan : Fitting Survival Regression Models via 'Stan' (Version 0.0.7.1)
2023
tern.rbmi : Create Interface for 'RBMI' and 'tern' (Version 0.1.4)
2024
thurstonianIRT : Thurstonian IRT Models (Version 0.12.5)
2019
tidybayes : Tidy Data and 'Geoms' for Bayesian Models (Version 3.0.7)
2018
tipsae : Tools for Handling Indices and Proportions in Small Area Estimation (Version 1.0.3)
2022
tmbstan : MCMC Sampling from 'TMB' Model Object using 'Stan' (Version 1.0.91)
2017
trialr : Clinical Trial Designs in 'rstan' (Version 0.1.6)
2017
truncnormbayes : Estimates Moments for a Truncated Normal Distribution using 'Stan' (Version 0.0.3)
2022
tsnet : Fitting, Comparing, and Visualizing Networks Based on Time Series Data (Version 0.1.0)
2024
ubms : Bayesian Models for Data from Unmarked Animals using 'Stan' (Version 1.2.7)
2021
unifed : The Unifed Distribution (Version 1.1.6)
2019
varian : Variability Analysis in R (Version 0.2.2)
2015
visit : Vaccine Phase I Design with Simultaneous Evaluation of Immunogenicity and Toxicity (Version 2.2)
2019
walker : Bayesian Generalized Linear Models with Time-Varying Coefficients (Version 1.0.10)
2017
winputall : Variable Input Allocation Among Crops (Version 1.0.1)
2024
zoid : Bayesian Zero-and-One Inflated Dirichlet Regression Modelling (Version 1.3.1)
2021
Showing 1-217 of 217
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