alakazam: Immunoglobulin Clonal Lineage and Diversity Analysis

Canonical link: https://rscholar.com/pkg/alakazam

Susanna Marquez • Namita Gupta • Nima Nouri • Ruoyi Jiang • Julian Zhou • Kenneth Hoehn • Daniel Gadala-Maria • Edel Aron • Cole Jensen • Jason Vander Heiden • Steven Kleinstein • View description and downloads View dependencies GitHub project

2016 Published

0 Citations

11 Authors

17 Revisions

1.3.0 Version

AGPL-3 License

Referenced by ⇅	Year
piglet: Program for Inferring Ig Allele Similarity Clusters and Genotypes (Version 1.0.1)	2023
AntibodyForests: Delineating Inter- And Intra-Antibody Repertoire Evolution (Version 1.0.0)	2025
UniprotR: Retrieving Information of Proteins from Uniprot (Version 2.4.0)	2019
dowser: B Cell Receptor Phylogenetics Toolkit (Version 2.3)	2021
ogrdbstats: Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics (Version 0.5.2)	2023
scoper: Spectral Clustering-Based Method for Identifying B Cell Clones (Version 1.3.0)	2018
shazam: Immunoglobulin Somatic Hypermutation Analysis (Version 1.2.0)	2016
tigger: Infers Novel Immunoglobulin Alleles from Sequencing Data (Version 1.1.0)	2016

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