R Package Scholar
19,393

RSpectra: Solvers for Large-Scale Eigenvalue and SVD Problems

Yixuan Qiu  Jiali Mei  Gael Guennebaud  Jitse Niesen   View description and downloadsView dependenciesGitHub project

2016 Published
0.16-1 Version
0 Citations
4 Authors
Referenced by ⇅ Year
bcTSNE: Projected t-SNE for Batch Correction (Version 0.11.1)

2020
fastCorrDiff: Fast Differential Correlation Matrix Screening (Version 0.5)

2021
hmlasso: Lasso with High Missing Rate (Version 0.0.1)

2019
RUVIIIC: RUV-III-C (Version 1.0.19)

2020
spflow: Spatial Econometric Interaction Models (Version 0.1.0)

2021
WSGeometry: Geometric Tools Based on Balanced/Unbalanced Optimal Transport (Version 1.2.1)

2021
ClimMobTools: API Client for the 'ClimMob' Platform (Version 1.2)

2019
GhostKnockoff: The Knockoff Inference Using Summary Statistics (Version 0.1.0)

2021
Gmedian: Geometric Median, k-Medians Clustering and Robust Median PCA (Version 1.2.7)

2016
HCD: Hierarchical Community Detection by Recursive Partitioning (Version 1.0)

2019
HDMFA: High-Dimensional Matrix Factor Analysis (Version 0.1.1)

2023
Holomics: An User-Friendly R 'shiny' Application for Multi-Omics Data Integration and Analysis (Version 1.1.1)

2023
HyperG: Hypergraphs in R (Version 1.0.0)

2021
IALS: Iterative Alternating Least Square Estimation for Large-Dimensional Matrix Factor Model (Version 0.1.3)

2024
InspectChangepoint: High-Dimensional Changepoint Estimation via Sparse Projection (Version 1.2)

2016
LSX: Semi-Supervised Algorithm for Document Scaling (Version 1.4.0)

2020
MatrixCorrelation: Matrix Correlation Coefficients (Version 0.10.0)

2016
NetworkDistance: Distance Measures for Networks (Version 0.3.4)

2017
NetworkReg: Regression Model on Network-Linked Data with Statistical Inference (Version 1.1)

2020
OLCPM: Online Change Point Detection for Matrix-Valued Time Series (Version 0.1.2)

2023
OPTtesting: Optimal Testing (Version 1.0.0)

2022
PlackettLuce: Plackett-Luce Models for Rankings (Version 0.4.3)

2017
RGMM: Robust Mixture Model (Version 2.1.0)

2022
RMLPCA: Maximum Likelihood Principal Component Analysis (Version 0.0.1)

2020
Rdimtools: Dimension Reduction and Estimation Methods (Version 1.1.2)

2017
Rfssa: Functional Singular Spectrum Analysis (Version 3.1.0)

2019
RobRegression: Robust Multivariate Regression (Version 0.1.0)

2024
Rssa: A Collection of Methods for Singular Spectrum Analysis (Version 1.0.5)

2011
SDPDmod: Spatial Dynamic Panel Data Modeling (Version 0.0.5)

2022
SISIR: Select Intervals Suited for Functional Regression (Version 0.2.2)

2020
SKAT: SNP-Set (Sequence) Kernel Association Test (Version 2.2.5)

2012
ScorePlus: Implementation of SCORE, SCORE+ and Mixed-SCORE (Version 0.1)

2019
Seurat: Tools for Single Cell Genomics (Version 5.1.0)

2017
SmartSVA: Fast and Robust Surrogate Variable Analysis (Version 0.1.3)

2016
SpectralClMixed: Spectral Clustering for Mixed Type Data (Version 1.0.1)

2022
SplitKnockoff: Split Knockoffs for Structural Sparsity (Version 1.2)

2021
TopicScore: The Topic SCORE Algorithm to Fit Topic Models (Version 0.0.1)

2019
Vicus: Exploiting Local Structures to Improve Network-Based Analysis of Biological Data (Version 0.99.0)

2023
bamm: Species Distribution Models as a Function of Biotic, Abiotic and Movement Factors (BAM) (Version 0.4.3)

2022
bigsnpr: Analysis of Massive SNP Arrays (Version 1.12.2)

2017
bigstatsr: Statistical Tools for Filebacked Big Matrices (Version 1.5.12)

2017
bigutilsr: Utility Functions for Large-scale Data (Version 0.3.4)

2019
blapsr: Bayesian Inference with Laplace Approximations and P-Splines (Version 0.6.1)

2020
bspcov: Bayesian Sparse Estimation of a Covariance Matrix (Version 1.0.0)

2024
butcher: Model Butcher (Version 0.3.4)

2019
castor: Efficient Phylogenetics on Large Trees (Version 1.8.2)

2017
celltrackR: Motion Trajectory Analysis (Version 1.2.0)

2020
countland: Analysis of Biological Count Data, Especially from Single-Cell RNA-Seq (Version 0.1.2)

2022
cvCovEst: Cross-Validated Covariance Matrix Estimation (Version 1.2.2)

2021
ddpca: Diagonally Dominant Principal Component Analysis (Version 1.1)

2019
dimRed: A Framework for Dimensionality Reduction (Version 0.2.6)

2017
dtwclust: Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance (Version 5.5.12)

2015
epca: Exploratory Principal Component Analysis (Version 1.1.0)

2020
fad: Factor Analysis for Data (Version 0.9-1)

2020
fase: Functional Adjacency Spectral Embedding (Version 1.0.1)

2024
fastRG: Sample Generalized Random Dot Product Graphs in Linear Time (Version 0.3.2)

2021
fastadi: Self-Tuning Data Adaptive Matrix Imputation (Version 0.1.1)

2022
filling: Matrix Completion, Imputation, and Inpainting Methods (Version 0.2.3)

2017
funcharts: Functional Control Charts (Version 1.4.1)

2021
fungible: Psychometric Functions from the Waller Lab (Version 2.4.4)

2015
fuser: Fused Lasso for High-Dimensional Regression over Groups (Version 1.0.1)

2017
gasper: Graph Signal Processing (Version 1.1.6)

2020
ggmix: Variable Selection in Linear Mixed Models for SNP Data (Version 0.0.2)

2020
greed: Clustering and Model Selection with the Integrated Classification Likelihood (Version 0.6.1)

2021
gsbm: Estimate Parameters in the Generalized SBM (Version 0.2.2)

2020
hydra: Hyperbolic Embedding (Version 0.1.0)

2019
knockoff: The Knockoff Filter for Controlled Variable Selection (Version 0.3.6)

2014
kpcalg: Kernel PC Algorithm for Causal Structure Detection (Version 1.0.1)

2017
lfmm: Latent Factor Mixed Models (Version 1.1)

2020
lme4breeding: Relationship-Based Mixed-Effects Models (Version 1.0.22)

2024
locStra: Fast Implementation of (Local) Population Stratification Methods (Version 1.9)

2019
maotai: Tools for Matrix Algebra, Optimization and Inference (Version 0.2.5)

2019
markerpen: Marker Gene Detection via Penalized Principal Component Analysis (Version 0.1.1)

2021
miRNAss: Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples (Version 1.5)

2017
missSBM: Handling Missing Data in Stochastic Block Models (Version 1.0.4)

2019
motifcluster: Motif-Based Spectral Clustering of Weighted Directed Networks (Version 0.2.3)

2020
multiblock: Multiblock Data Fusion in Statistics and Machine Learning (Version 0.8.8.1)

2021
multiness: MULTIplex NEtworks with Shared Structure (Version 1.0.2)

2022
multivarious: Extensible Data Structures for Multivariate Analysis (Version 0.2.0)

2024
nett: Network Analysis and Community Detection (Version 1.0.0)

2022
onlinePCA: Online Principal Component Analysis (Version 1.3.2)

2015
pcadapt: Fast Principal Component Analysis for Outlier Detection (Version 4.3.5)

2015
phylter: Detect and Remove Outliers in Phylogenomics Datasets (Version 0.9.11)

2023
qlcVisualize: Visualization for Quantitative Language Comparison (Version 0.3)

2015
quanteda.textmodels: Scaling Models and Classifiers for Textual Data (Version 0.9.7)

2020
rARPACK: Solvers for Large Scale Eigenvalue and SVD Problems (Version 0.11-0)

2014
rSPDE: Rational Approximations of Fractional Stochastic Partial Differential Equations (Version 2.3.3)

2019
rags2ridges: Ridge Estimation of Precision Matrices from High-Dimensional Data (Version 2.2.7)

2014
rainette: The Reinert Method for Textual Data Clustering (Version 0.3.1.1)

2020
randnet: Random Network Model Estimation, Selection and Parameter Tuning (Version 0.7)

2017
recipes: Preprocessing and Feature Engineering Steps for Modeling (Version 1.0.10)

2017
redist: Simulation Methods for Legislative Redistricting (Version 4.2.0)

2015
rhype: Work with Hypergraphs in R (Version 0.3.0)

2021
scTenifoldKnk: In-Silico Knockout Experiments from Single-Cell Gene Regulatory Networks (Version 1.0.1)

2020
scTenifoldNet: Construct and Compare scGRN from Single-Cell Transcriptomic Data (Version 1.3)

2019
smartsnp: Fast Multivariate Analyses of Big Genomic Data (Version 1.1.0)

2021
sommer: Solving Mixed Model Equations in R (Version 4.3.4)

2016
spaMM: Mixed-Effect Models, with or without Spatial Random Effects (Version 4.5.0)

2013
sparseLRMatrix: Represent and Use Sparse + Low Rank Matrices (Version 0.1.0)

2021
sparsegl: Sparse Group Lasso (Version 1.1.0)

2022
spatialreg: Spatial Regression Analysis (Version 1.3-4)

2019
spdep: Spatial Dependence: Weighting Schemes, Statistics (Version 1.3-5)

2002
textmineR: Functions for Text Mining and Topic Modeling (Version 3.0.5)

2015
treestats: Phylogenetic Tree Statistics (Version 1.0.5)

2024
ubms: Bayesian Models for Data from Unmarked Animals using 'Stan' (Version 1.2.6)

2021
umap: Uniform Manifold Approximation and Projection (Version 0.2.10.0)

2018
uwot: The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction (Version 0.2.2)

2019
vsp: Vintage Sparse PCA for Semi-Parametric Factor Analysis (Version 0.1.1)

2022
yacca: Yet Another Canonical Correlation Analysis Package (Version 1.4-2)

2008

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