R Package Scholar
23,790

geiger: Analysis of Evolutionary Diversification

Luke Harmon  Matthew Pennell  Chad Brock  Joseph Brown  Wendell Challenger,  Jon Eastman  Rich FitzJohn  Rich Glor  Gene Hunt  Liam Revell  Graham Slater,  Josef Uyeda  Jason Weir  CRAN team   View description and downloadsView dependenciesGitHub project

2007 Published
2.0.11 Version
0 Citations
14 Authors
Referenced by ⇅ Year
Rarefy: Rarefaction Methods (Version 1.1.1)

2020
treeplyr: "dplyr" Functionality for Matched Tree and Data Objects (Version 0.1.10)

2016
treedata.table: Manipulation of Matched Phylogenies and Data using 'data.table' (Version 0.1.0)

2020
datelife: Scientific Data on Time of Lineage Divergence for Your Taxa (Version 0.6.8)

2022
FishPhyloMaker: Phylogenies for a List of Finned-Ray Fishes (Version 0.2.0)

2021
OUwie: Analysis of Evolutionary Rates in an OU Framework (Version 2.10)

2011
OpenTreeChronograms: Open Tree of Life Chronograms (Version 2022.1.28)

2022
RNeXML: Semantically Rich I/O for the 'NeXML' Format (Version 2.4.11)

2014
RPANDA: Phylogenetic ANalyses of DiversificAtion (Version 2.3)

2014
TreeSim: Simulating Phylogenetic Trees (Version 2.4)

2010
cauphy: Trait Evolution on Phylogenies Using the Cauchy Process (Version 1.0.2)

2023
convevol: Analysis of Convergent Evolution (Version 2.2.1)

2013
diversitree: Comparative 'Phylogenetic' Analyses of Diversification (Version 0.10-0)

2010
evobiR: Comparative and Population Genetic Analyses (Version 1.1)

2013
fishtree: Interface to the Fish Tree of Life API (Version 0.3.4)

2018
hillR: Diversity Through Hill Numbers (Version 0.5.2)

2018
hilldiv: Integral Analysis of Diversity Based on Hill Numbers (Version 1.5.1)

2019
hisse: Hidden State Speciation and Extinction (Version 2.1.11)

2015
markophylo: Markov Chain Models for Phylogenetic Trees (Version 1.0.9)

2015
nichevol: Tools for Ecological Niche Evolution Assessment Considering Uncertainty (Version 0.1.20)

2020
nodeSub: Simulate DNA Alignments Using Node Substitutions (Version 1.2.8)

2022
pcmabc: Approximate Bayesian Computations for Phylogenetic Comparative Methods (Version 1.1.3)

2019
phytools: Phylogenetic Tools for Comparative Biology (and Other Things) (Version 2.3-0)

2011
pmc: Phylogenetic Monte Carlo (Version 1.0.6)

2012
ppgm: PaleoPhyloGeographic Modeling of Climate Niches and Species Distributions (Version 1.0.3)

2024
ratematrix: Bayesian Estimation of the Evolutionary Rate Matrix (Version 1.2.4)

2018
secsse: Several Examined and Concealed States-Dependent Speciation and Extinction (Version 3.1.0)

2019
sensiPhy: Sensitivity Analysis for Comparative Methods (Version 0.8.5)

2016
surface: Fitting Hansen Models to Investigate Convergent Evolution (Version 0.6)

2013
treestats: Phylogenetic Tree Statistics (Version 1.70.5)

2024
windex: Analysing Convergent Evolution using the Wheatsheaf Index (Version 2.0.8)

2014

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