Referenced by ⇅
Year
BacArena : Modeling Framework for Cellular Communities in their
Environments (Version 1.8.2)
2015
BayesSPsurv : Bayesian Spatial Split Population Survival Model (Version 0.1.4)
2020
binaryTimeSeries : Analyzes a Binary Variable During a Time Series (Version 1.0.2)
2022
bioassays : Summarising Multi Well Plate Cellular Assay (Version 1.0.1)
2020
bmotif : Motif Analyses of Bipartite Networks (Version 2.0.2)
2018
CropDetectR : Crop Row Detector (Version 0.0.1)
2019
drfit : Dose-Response Data Evaluation (Version 0.7.2)
2004
dtwSat : Time-Weighted Dynamic Time Warping for Satellite Image Time
Series Analysis (Version 1.0.0)
2015
dynfeature : Feature Importance for Dynamic Processes (Version 1.0.1)
2021
dynplot : Visualising Single-Cell Trajectories (Version 1.1.2)
2021
FlexDotPlot : Flexible Dot Plot (Version 0.2.2)
2022
foster : Forest Structure Extrapolation with R (Version 0.1.1)
2020
genius : Easily Access Song Lyrics from Genius.com (Version 2.2.3)
2019
ggcoverage : Visualize Genome Coverage with Various Annotations (Version 0.7.1)
2022
HierDpart : Partitioning Hierarchical Diversity and Differentiation Across
Metrics and Scales, from Genes to Ecosystems (Version 1.5.0)
2018
HRM : High-Dimensional Repeated Measures (Version 1.2.1)
2015
intensity.analysis : Intensity of Change for Comparing Categorical Maps from
Sequential Intervals (Version 0.1.6)
2019
IntLIM : Integration of Omics Data Using Linear Modeling (Version 2.0.2)
2022
iriR : Global Innovation Through Company Level Data (Version 0.2.2)
2020
kernelPhil : Kernel Smoothing Tools for Philology and Historical Dialectology (Version 0.1)
2021
linea : Linear Regression Interface (Version 0.1.1)
2022
mdapack : Medical Data Analysis Pack (Version 0.0.2)
2020
microsamplingDesign : Finding Optimal Microsampling Designs for Non-Compartmental
Pharmacokinetic Analysis (Version 1.0.8)
2018
microSTASIS : Microbiota STability ASsessment via Iterative cluStering (Version 0.1.0)
2021
MoMPCA : Inference and Clustering for Mixture of Multinomial Principal
Component Analysis (Version 1.0.1)
2020
muHVT : Constructing Hierarchical Voronoi Tessellations and Overlay
Heatmap for Data Analysis (Version 3.0.0)
2018
nCov2019 : Exploring "COVID"-19 Statistics (Version 0.4.6)
2021
PALMO : Identify Intra and Inter-Donor Variations in Bulk or Single Cell
Longitudinal Dataset (Version 0.1.2)
2022
PAutilities : Streamline Physical Activity Research (Version 1.1.0)
2019
propr : Calculating Proportionality Between Vectors of Compositional
Data (Version 4.2.6)
2016
pspline.inference : Estimation of Characteristics of Seasonal and Sporadic
Infectious Disease Outbreaks Using Generalized Additive
Modeling with Penalized Basis Splines (Version 1.0.4)
2020
PWFSLSmoke : Utilities for Working with Air Quality Monitoring Data (Version 1.2.117)
2017
rabhit : Inference Tool for Antibody Haplotype (Version 0.2.5)
2019
Rlda : Bayesian LDA for Mixed-Membership Clustering Analysis (Version 0.2.6)
2017
rplos : Interface to the Search API for "PLoS" Journals (Version 1.0.0)
2011
rsbp : Part Information from the Registry of Standard Biological Parts (Version 0.1.0)
2020
SACOBRA : Self-Adjusting COBRA (Version 1.2)
2015
shadow : Geometric Shadow Calculations (Version 0.7.1)
2016
snht : Standard Normal Homogeneity Test (Version 1.0.5)
2014
spiR : Wrapper for the Social Progress Index Data (Version 0.2.1)
2020
STMedianPolish : Spatio-Temporal Median Polish (Version 0.2)
2015
TippingPoint : Enhanced Tipping Point Displays the Results of Sensitivity
Analysis for Missing Data (Version 1.2.0)
2016
traitdataform : Formatting and Harmonizing Ecological Trait-Data (Version 0.6.8)
2018
treecm : Centre of Mass Assessment and Consolidation of Trees (Version 1.2.2)
2011
validateRS : One-Sided Multivariate Testing Procedures for Rating Systems (Version 1.0.0)
2015
vanddraabe : Identification and Statistical Analysis of Conserved Waters Near
Proteins (Version 1.1.1)
2017
yaps : Track Estimation using YAPS (Yet Another Positioning Solver) (Version 1.2.5)
2021
zonator : Utilities for Zonation Spatial Conservation Prioritization
Software (Version 0.6.0)
2017
SourceSet : A Graphical Model Approach to Identify Primary Genes in
Perturbed Biological Pathways (Version 0.1.5)
2018
GNGTools : Tools for Go/No-Go Decision-Making Framework (Version 1.0.0)
2022
gsdensity : Density-Based Gene Set Specificity Evaluation (Version 0.1.2)
2023
lpjmlkit : Toolkit for Basic LPJmL Handling (Version 1.0.11)
2023
eiCompare : Compares Different Ecological Inference Methods (Version 3.0.4)
2016
ino : Initialization of Numerical Optimization (Version 1.0.2)
2022
comradesOO : Analysis of COMRADES (Cross-Linking Matched RNA and Deep Sequencing) Data (Version 0.1.1)
2023
deconstructSigs : Identifies Signatures Present in a Tumor Sample (Version 1.8.0)
2016
rsleep : Analysis of Sleep Data (Version 1.0.12)
2019
mmpf : Monte-Carlo Methods for Prediction Functions (Version 0.0.5)
2016
valse : Variable Selection with Mixture of Models (Version 0.1-0)
2021
packDAMipd : Decision Analysis Modelling Package with Parameters Estimation Ability from Individual Patient Level Data (Version 1.1.0)
2020
HS : Homogenous Segmentation for Spatial Lines Data (Version 1.1)
2019
IDSA : An Interactive Detector for Spatial Associations (Version 2.1)
2021
digitalDLSorteR : Deconvolution of Bulk RNA-Seq Data Based on Deep Learning (Version 1.1.0)
2021
myTAI : Evolutionary Transcriptomics (Version 0.9.3)
2014
GaMaBioMD : Diversity Analysis for Sequence Data (Version 0.2.0)
2024
MetaIntegrator : Meta-Analysis of Gene Expression Data (Version 2.1.3)
2016
spNetwork : Spatial Analysis on Network (Version 0.4.4.3)
2021
autoGO : Auto-GO: Reproducible, Robust and High Quality Ontology Enrichment Visualizations (Version 0.9.1)
2023
flowr : Streamlining Design and Deployment of Complex Workflows (Version 0.9.11)
2015
MBNMAdose : Dose-Response MBNMA Models (Version 0.4.3)
2019
MBNMAtime : Run Time-Course Model-Based Network Meta-Analysis (MBNMA) Models (Version 0.2.4)
2019
diffudist : Diffusion Distance for Complex Networks (Version 1.0.1)
2021
ABHgenotypeR : Easy Visualization of ABH Genotypes (Version 1.0.1)
2016
AFheritability : The Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors (Version 0.1.0)
2019
AHPGaussian : New Multicriteria Method: AHPGaussian (Version 0.1.1)
2023
ALUES : Agricultural Land Use Evaluation System (Version 0.2.1)
2022
ANN2 : Artificial Neural Networks for Anomaly Detection (Version 2.3.4)
2017
ARPobservation : Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes (Version 1.2.2)
2014
AdaptGauss : Gaussian Mixture Models (GMM) (Version 1.6)
2015
AppliedPredictiveModeling : Functions and Data Sets for 'Applied Predictive Modeling' (Version 1.1-7)
2013
AurieLSHGaussian : Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections (Version 0.2.0)
2017
AvInertia : Calculate the Inertial Properties of a Flying Bird (Version 0.0.2)
2021
BACCT : Bayesian Augmented Control for Clinical Trials (Version 1.0)
2016
BAwiR : Analysis of Basketball Data (Version 1.3.2)
2018
BBEST : Bayesian Estimation of Incoherent Neutron Scattering Backgrounds (Version 0.1-8)
2014
BCEA : Bayesian Cost Effectiveness Analysis (Version 2.4.6)
2012
BEKKs : Multivariate Conditional Volatility Modelling and Forecasting (Version 1.4.5)
2022
BTSPAS : Bayesian Time-Stratified Population Analysis (Version 2024.11.1)
2010
BayesCTDesign : Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data (Version 0.6.1)
2018
BayesPostEst : Generate Postestimation Quantities for Bayesian MCMC Estimation (Version 0.3.2)
2019
BayesianFactorZoo : Bayesian Solutions for the Factor Zoo: We Just Ran Two Quadrillion Models (Version 0.0.0.3)
2023
BayesianReasoning : Plot Positive and Negative Predictive Values for Medical Tests (Version 0.4.2)
2020
BinarybalancedCut : Threshold Cut Point of Probability for a Binary Classifier Model (Version 0.2)
2017
CACIMAR : Cross-Species Analysis of Cell Identities, Markers and Regulations (Version 1.0.0)
2022
CANSIM2R : Directly Extracts Complete CANSIM Data Tables (Version 1.14.1)
2015
CAinterprTools : Graphical Aid in Correspondence Analysis Interpretation and Significance Testings (Version 1.1.0)
2018
CGGP : Composite Grid Gaussian Processes (Version 1.0.4)
2019
CJIVE : Canonical Joint and Individual Variation Explained (CJIVE) (Version 0.1.0)
2023
CMapViz : Representation Tool For Output Of Connectivity Map (CMap) Analysis (Version 0.1.0)
2019
CNVScope : A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization (Version 3.7.2)
2018
CSTools : Assessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales (Version 5.2.0)
2019
CalibratR : Mapping ML Scores to Calibrated Predictions (Version 0.1.2)
2018
ChemoSpec : Exploratory Chemometrics for Spectroscopy (Version 6.1.10)
2011
Cleanet : Automated Doublet Detection and Classification for Cytometry Data (Version 1.0.0)
2024
ClimClass : Climate Classification According to Several Indices (Version 2.1.0)
2014
ClussCluster : Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data (Version 0.1.0)
2019
ClustAssess : Tools for Assessing Clustering (Version 0.3.0)
2021
Cluster.OBeu : Cluster Analysis 'OpenBudgets.eu' (Version 1.2.3)
2018
CoDiNA : Co-Expression Differential Network Analysis (Version 1.1.2)
2018
CommKern : Network-Based Communities and Kernel Machine Methods (Version 1.0.1)
2022
CompositeReliability : Determine the Composite Reliability of a Naturalistic, Unbalanced Dataset (Version 1.0.3)
2023
ConsensusOPLS : Consensus OPLS for Multi-Block Data Fusion (Version 1.0.0)
2024
CoreMicrobiomeR : Identification of Core Microbiome (Version 0.1.0)
2024
Cubist : Rule- And Instance-Based Regression Modeling (Version 0.4.4)
2011
CytOpT : Optimal Transport for Gating Transfer in Cytometry Data with Domain Adaptation (Version 0.9.4)
2022
DBHC : Sequence Clustering with Discrete-Output HMMs (Version 0.0.3)
2018
DGM : Dynamic Graphical Models (Version 1.7.4)
2018
DIMORA : Diffusion Models R Analysis (Version 0.3.6)
2018
DImodelsMulti : Fit Multivariate Diversity-Interactions Models with Repeated Measures (Version 1.1.1)
2024
DVHmetrics : Analyze Dose-Volume Histograms and Check Constraints (Version 0.4.2)
2015
DYNATE : Dynamic Aggregation Testing (Version 0.1)
2022
DanielBiostatistics10th : Functions for Wayne W. Daniel's Biostatistics, Tenth Edition (Version 0.2.6)
2022
DataExplorer : Automate Data Exploration and Treatment (Version 0.8.3)
2016
DataVisualizations : Visualizations of High-Dimensional Data (Version 1.3.2)
2018
DeclareDesign : Declare and Diagnose Research Designs (Version 1.0.10)
2018
DeductiveR : Deductive Rational Method (Version 1.1.0)
2021
DescribeDisplay : An Interface to the 'DescribeDisplay' 'GGobi' Plugin (Version 0.2.11)
2006
DirectEffects : Estimating Controlled Direct Effects for Explaining Causal Findings (Version 0.3)
2018
DiscreteGapStatistic : An Extension of the Gap Statistic for Ordinal/Categorical Data (Version 1.0.0)
2024
DramaAnalysis : Analysis of Dramatic Texts (Version 3.0.2)
2019
DrugSim2DR : Predict Drug Functional Similarity to Drug Repurposing (Version 0.1.1)
2022
EEM : Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data (Version 1.1.1)
2015
EFA.MRFA : Dimensionality Assessment Using Minimum Rank Factor Analysis (Version 1.1.2)
2019
EMJMCMC : Evolutionary Mode Jumping Markov Chain Monte Carlo Expert Toolbox (Version 1.5.0)
2024
ENMTools : Analysis of Niche Evolution using Niche and Distribution Models (Version 1.1.2)
2020
ETRep : Analysis of Elliptical Tubes Under the Relative Curvature Condition (Version 1.1.0)
2024
EcoEnsemble : A General Framework for Combining Ecosystem Models (Version 1.1.0)
2022
EloOptimized : Optimized Elo Rating Method for Obtaining Dominance Ranks (Version 0.3.2)
2018
EpiDynamics : Dynamic Models in Epidemiology (Version 0.3.1)
2014
EpiEstim : Estimate Time Varying Reproduction Numbers from Epidemic Curves (Version 2.2-4)
2012
EstimDiagnostics : Diagnostic Tools and Unit Tests for Statistical Estimators (Version 0.0.3)
2020
EvaluateCore : Quality Evaluation of Core Collections (Version 0.1.3)
2020
EvolutionaryGames : Important Concepts of Evolutionary Game Theory (Version 0.1.2)
2017
Evomorph : Evolutionary Morphometric Simulation (Version 0.9)
2016
FCPS : Fundamental Clustering Problems Suite (Version 1.3.4)
2020
FRK : Fixed Rank Kriging (Version 2.3.1)
2017
FinCal : Time Value of Money, Time Series Analysis and Computational Finance (Version 0.6.3)
2013
ForeCA : Forecastable Component Analysis (Version 0.2.7)
2012
ForecastTB : Test Bench for the Comparison of Forecast Methods (Version 1.0.1)
2020
FreqProf : Frequency Profiles Computing and Plotting (Version 0.0.1)
2016
FuncNN : Functional Neural Networks (Version 1.0)
2020
G2Sd : Grain-Size Statistics and Description of Sediment (Version 2.1.5)
2012
GCalignR : Simple Peak Alignment for Gas-Chromatography Data (Version 1.0.7)
2017
GEInter : Robust Gene-Environment Interaction Analysis (Version 0.3.2)
2021
GISSB : Network Analysis on the Norwegian Road Network (Version 1.1)
2023
GMSimpute : Generalized Mass Spectrum Missing Peaks Abundance Imputation (Version 0.0.1.0)
2019
GREENeR : Geospatial Regression Equation for European Nutrient Losses (GREEN) (Version 1.0.0)
2022
GRIDCOPULA : Bivariate Copula Functions Based on Regular Grid (Version 1.0.1)
2022
GeRnika : Simulation, Visualization and Comparison of Tumor Evolution Data (Version 1.0.0)
2024
GeneSelectR : 'GeneSelectR' - Comprehensive Feature Selection Workflow for Bulk RNAseq Datasets (Version 1.0.1)
2023
GeneralizedUmatrix : Credible Visualization for Two-Dimensional Projections of Data (Version 1.2.6)
2017
GetDFPData : Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System (Version 1.6)
2017
GseaVis : Implement for 'GSEA' Enrichment Visualization (Version 0.0.5)
2022
HH : Statistical Analysis and Data Display: Heiberger and Holland (Version 3.1-52)
2006
HLMdiag : Diagnostic Tools for Hierarchical (Multilevel) Linear Models (Version 0.5.0)
2011
HVT : Constructing Hierarchical Voronoi Tessellations and Overlay Heatmaps for Data Analysis (Version 24.9.1)
2023
HaDeX : Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data (Version 1.2.2)
2019
Holomics : An User-Friendly R 'shiny' Application for Multi-Omics Data Integration and Analysis (Version 1.1.1)
2023
HuraultMisc : Guillem Hurault Functions' Library (Version 1.1.1)
2021
IATscores : Implicit Association Test Scores Using Robust Statistics (Version 0.2.7)
2015
IMTest : Information Matrix Test for Generalized Partial Credit Models (Version 1.0.0)
2017
IOHanalyzer : Data Analysis Part of 'IOHprofiler' (Version 0.1.8.10)
2019
IPV : Item Pool Visualization (Version 1.0.0)
2020
ITNr : Analysis of the International Trade Network (Version 0.7.0)
2018
IceSat2R : ICESat-2 Altimeter Data using R (Version 1.0.6)
2022
ImHD : Artificial Intelligence Based Machine Learning Algorithms for Height Diameter Relationships of Conifer Trees (Version 0.1.0)
2023
IncDTW : Incremental Calculation of Dynamic Time Warping (Version 1.1.4.4)
2017
Information : Data Exploration with Information Theory (Weight-of-Evidence and Information Value) (Version 0.0.9)
2015
InteRD : The Integrated and Robust Deconvolution (Version 0.1.1)
2022
InterfaceqPCR : GUI to Analyse qPCR Results after PMA Treatment or not (Version 1.0.1)
2017
Irescale : Calculate and Rectify Moran's I (Version 2.3.0)
2019
Kmedians : K-Medians (Version 2.2.0)
2022
L0Learn : Fast Algorithms for Best Subset Selection (Version 2.1.0)
2018
LMMstar : Repeated Measurement Models for Discrete Times (Version 1.1.0)
2021
LOMAR : Localization Microscopy Data Analysis (Version 0.5.0)
2021
LPRelevance : Relevance-Integrated Statistical Inference Engine (Version 3.3)
2019
LSX : Semi-Supervised Algorithm for Document Scaling (Version 1.4.0)
2020
Lahman : Sean 'Lahman' Baseball Database (Version 12.0-0)
2011
LambertW : Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data (Version 0.6.9-1)
2009
LatentBMA : Bayesian Model Averaging for Univariate Link Latent Gaussian Models (Version 0.1.1)
2024
LipidomicsR : Elegant Tools for Processing and Visualization of Lipidomics Data (Version 0.3.6)
2024
LongDat : A Tool for 'Covariate'-Sensitive Longitudinal Analysis on 'omics' Data (Version 1.1.3)
2022
MARVEL : Revealing Splicing Dynamics at Single-Cell Resolution (Version 1.4.0)
2021
MBMethPred : Medulloblastoma Subgroups Prediction (Version 0.1.4.2)
2022
MCTrend : Monte Carlo Trend Analysis (Version 1.0.1)
2023
MF.beta4 : Measuring Ecosystem Multi-Functionality and Its Decomposition (Version 1.1.1)
2023
MGLM : Multivariate Response Generalized Linear Models (Version 0.2.1)
2013
MIGEE : Impute Missing Values and Fitting Linear Mixed Effect Model (Version 0.1.0)
2024
MIMER : Data Wrangling for Antimicrobial Resistance Studies (Version 1.0.3)
2024
MLFS : Machine Learning Forest Simulator (Version 0.4.2)
2022
MLVSBM : A Stochastic Block Model for Multilevel Networks (Version 0.2.4)
2021
MLZ : Mean Length-Based Estimators of Mortality using TMB (Version 0.1.5)
2018
MMVBVS : Missing Multivariate Bayesian Variable Selection (Version 0.8.0)
2019
MOEADr : Component-Wise MOEA/D Implementation (Version 1.1.3)
2017
MPTmultiverse : Multiverse Analysis of Multinomial Processing Tree Models (Version 0.4-2)
2018
MRFcov : Markov Random Fields with Additional Covariates (Version 1.0.39)
2018
MSEtool : Management Strategy Evaluation Toolkit (Version 3.7.3)
2018
MSRDT : Multi-State Reliability Demonstration Tests (MSRDT) (Version 0.1.0)
2020
MSclassifR : Automated Classification of Mass Spectra (Version 0.3.3)
2022
MTLR : Survival Prediction with Multi-Task Logistic Regression (Version 0.2.1)
2018
MTPS : Multi-Task Prediction using Stacking Algorithms (Version 1.0.2)
2020
MantaID : A Machine-Learning Based Tool to Automate the Identification of Biological Database IDs (Version 1.0.4)
2022
MarketMatching : Market Matching and Causal Impact Inference (Version 1.2.1)
2018
Markovchart : Markov Chain-Based Cost-Optimal Control Charts (Version 2.1.5)
2020
MetaComp : EDGE Taxonomy Assignments Visualization (Version 1.1.2)
2017
MetaNet : Network Analysis for Omics Data (Version 0.1.2)
2024
MicroNiche : Microbial Niche Measurements (Version 1.0.0)
2020
MiscMetabar : Miscellaneous Functions for Metabarcoding Analysis (Version 0.10.1)
2024
MitoHEAR : Quantification of Mitochondrial DNA Heteroplasmy (Version 0.1.0)
2022
MixSIAR : Bayesian Mixing Models in R (Version 3.1.12)
2016
MortalityTables : A Framework for Various Types of Mortality / Life Tables (Version 2.0.5)
2018
MultIS : Reconstruction of Clones from Integration Site Readouts and Visualization (Version 0.6.2)
2021
MultiATSM : Multicountry Term Structure of Interest Rates Models (Version 1.1.0)
2021
NMADiagT : Network Meta-Analysis of Multiple Diagnostic Tests (Version 0.1.2)
2020
NMAoutlier : Detecting Outliers in Network Meta-Analysis (Version 0.1.18)
2019
NMF : Algorithms and Framework for Nonnegative Matrix Factorization (NMF) (Version 0.28)
2009
NPBayesImputeCat : Non-Parametric Bayesian Multiple Imputation for Categorical Data (Version 0.5)
2018
NPflow : Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data (Version 0.13.5)
2016
NetworkComparisonTest : Statistical Comparison of Two Networks Based on Several Invariance Measures (Version 2.2.2)
2016
NetworkComparr : Statistical Comparison of Networks (Version 0.0.0.9)
2023
NeuralNetTools : Visualization and Analysis Tools for Neural Networks (Version 1.5.3)
2014
NeuralSens : Sensitivity Analysis of Neural Networks (Version 1.1.3)
2019
NitrogenUptake2016 : Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata (Version 0.2.3)
2018
OpenRepGrid.ic : Interpretive Clustering for Repertory Grids (Version 0.6.2)
2020
OpenMx : Extended Structural Equation Modelling (Version 2.21.13)
2015
OptCirClust : Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible (Version 0.0.4)
2020
OralOpioids : Retrieving Oral Opioid Information (Version 2.0.3)
2023
PANACEA : Personalized Network-Based Anti-Cancer Therapy Evaluation (Version 1.0.1)
2023
PCADSC : Tools for Principal Component Analysis-Based Data Structure Comparisons (Version 0.8.0)
2017
PDQutils : PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations (Version 0.1.6)
2015
PLMIX : Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings (Version 2.1.1)
2016
PPtreeregViz : Projection Pursuit Regression Tree Visualization (Version 2.0.5)
2022
PSAboot : Bootstrapping for Propensity Score Analysis (Version 1.3.8)
2013
PTXQC : Quality Report Generation for MaxQuant and mzTab Results (Version 1.1.1)
2016
ParamHelpers : Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning (Version 1.14.1)
2012
Perc : Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network (Version 0.1.6)
2015
Petersen : Estimators for Two-Sample Capture-Recapture Studies (Version 2024.6.1)
2023
PhenotypeSimulator : Flexible Phenotype Simulation from Different Genetic and Noise Models (Version 0.3.4)
2017
Plasmidprofiler : Visualization of Plasmid Profile Results (Version 0.1.6)
2017
Platypus : Single-Cell Immune Repertoire and Gene Expression Analysis (Version 3.6.0)
2021
PlotPrjNetworks : Useful Networking Tools for Project Management (Version 1.0.0)
2015
PolicyPortfolios : Tools for Managing, Measuring and Visualizing Policy Portfolios (Version 0.3)
2021
PopGenHelpR : Streamline Population Genomic and Genetic Analyses (Version 1.3.2)
2023
PopGenReport : A Simple Framework to Analyse Population and Landscape Genetic Data (Version 3.1)
2012
ProjectionBasedClustering : Projection Based Clustering (Version 1.2.2)
2017
R3port : Report Functions to Create HTML and PDF Files (Version 0.2.5)
2018
RARfreq : Response Adaptive Randomization with 'Frequentist' Approaches (Version 0.1.5)
2023
RDML : Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files (Version 1.0)
2015
RDS : Respondent-Driven Sampling (Version 0.9-10)
2009
REN : Regularization Ensemble for Robust Portfolio Optimization (Version 0.1.0)
2024
RGENERATEPREC : Tools to Generate Daily-Precipitation Time Series (Version 1.2.9)
2015
RGMM : Robust Mixture Model (Version 2.1.0)
2022
RNeXML : Semantically Rich I/O for the 'NeXML' Format (Version 2.4.11)
2014
RSSL : Implementations of Semi-Supervised Learning Approaches for Classification (Version 0.9.7)
2016
RStoolbox : Remote Sensing Data Analysis (Version 1.0.0)
2015
RTIGER : HMM-Based Model for Genotyping and Cross-Over Identification (Version 2.1.0)
2021
RaJIVE : Robust Angle Based Joint and Individual Variation Explained (Version 1.0)
2021
RareComb : Combinatorial and Statistical Analyses of Rare Events (Version 1.1)
2021
Rata : Automated Test Assembly (Version 0.0.2)
2019
ReSurv : Machine Learning Models for Predicting Claim Counts (Version 1.0.0)
2024
ReliabilityTheory : Structural Reliability Analysis (Version 0.3.1)
2012
RelimpPCR : Relative Importance PCA Regression (Version 0.3.0)
2017
RepertoiR : Repertoire Graphical Visualization (Version 0.0.1)
2021
ReporterScore : Generalized Reporter Score-Based Enrichment Analysis for Omics Data (Version 0.1.9)
2024
Rirt : Data Analysis and Parameter Estimation Using Item Response Theory (Version 0.0.2)
2019
Rmst : Computerized Adaptive Multistage Testing (Version 0.0.3)
2019
Rnvd3 : An Incomplete Wrapper of the 'nvd3' JavaScript Library (Version 1.0.0)
2021
RobKF : Innovative and/or Additive Outlier Robust Kalman Filtering (Version 1.0.2)
2020
Rprofet : WOE Transformation and Scorecard Builder (Version 3.1.1)
2018
Rwtss : Client for Web Time-Series Service (Version 0.9.2)
2021
SAMtool : Stock Assessment Methods Toolkit (Version 1.8.0)
2021
SBMSplitMerge : Inference for a Generalised SBM with a Split Merge Sampler (Version 1.1.1)
2020
SCORPIUS : Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data (Version 1.0.9)
2017
SCdeconR : Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference (Version 1.0.0)
2024
SDMtune : Species Distribution Model Selection (Version 1.3.2)
2019
SEERaBomb : SEER and Atomic Bomb Survivor Data Analysis Tools (Version 2019.2)
2012
SFM : A Package for Analyzing Skew Factor Models (Version 0.1.0)
2024
SFSI : Sparse Family and Selection Index (Version 1.4.1)
2021
SISIR : Select Intervals Suited for Functional Regression (Version 0.2.3)
2016
SKFCPD : Fast Online Changepoint Detection for Temporally Correlated Data (Version 0.2.4)
2024
SLEMI : Statistical Learning Based Estimation of Mutual Information (Version 1.0.2)
2019
SPAS : Stratified-Petersen Analysis System (Version 2024.1.31)
2019
SQMtools : Analyze Results Generated by the 'SqueezeMeta' Pipeline (Version 1.6.3)
2023
SSDM : Stacked Species Distribution Modelling (Version 0.2.9)
2016
SSplots : Stock Status Plots (SSPs) (Version 0.1.2)
2023
STMotif : Discovery of Motifs in Spatial-Time Series (Version 2.0.2)
2018
SUMMER : Small-Area-Estimation Unit/Area Models and Methods for Estimation in R (Version 1.4.0)
2017
SVMMaj : Implementation of the SVM-Maj Algorithm (Version 0.2.9.3)
2011
SWIM : Scenario Weights for Importance Measurement (Version 1.0.0)
2019
SWMPr : Retrieving, Organizing, and Analyzing Estuary Monitoring Data (Version 2.5.1)
2015
ScottKnottESD : The Scott-Knott Effect Size Difference (ESD) Test (Version 2.0.3)
2016
SensMap : Sensory and Consumer Data Mapping (Version 0.7)
2017
SensoMineR : Sensory Data Analysis (Version 1.27)
2005
ShinyQuickStarter : 'RStudio' Addin for Building Shiny Apps per Drag & Drop (Version 2.0.1)
2020
ShinyWizard : An Interactive Wizard to Design, Build, and Deploy R Packages Demo Presentation (Version 1.1.3.11)
2024
SightabilityModel : Wildlife Sightability Modeling (Version 1.5.5)
2012
SixSigma : Six Sigma Tools for Quality Control and Improvement (Version 0.11.1)
2011
SlaPMEG : Pathway Testing for Longitudinal Omics (Version 1.0.2)
2020
SleepCycles : Sleep Cycle Detection (Version 1.1.4)
2020
SmCCNet : Sparse Multiple Canonical Correlation Network Analysis Tool (Version 2.0.3)
2019
SongEvo : An Individual-Based Model of Bird Song Evolution (Version 1.0.0)
2019
SoundShape : Sound Waves Onto Morphometric Data (Version 1.3.2)
2020
SoyNAM : Soybean Nested Association Mapping Dataset (Version 1.6.2)
2015
SpaCCI : Spatially Aware Cell-Cell Interaction Analysis (Version 1.0.2)
2024
SpatialDDLS : Deconvolution of Spatial Transcriptomics Data Based on Neural Networks (Version 1.0.3)
2023
StMoMo : Stochastic Mortality Modelling (Version 0.4.1)
2015
Statsomat : Shiny Apps for Automated Data Analysis and Automated Interpretation (Version 1.1.0)
2021
Superpower : Simulation-Based Power Analysis for Factorial Designs (Version 0.2.0)
2020
TCGAretriever : Retrieve Genomic and Clinical Data from CBioPortal Including TCGA Data (Version 1.9.1)
2016
TCIU : Spacekime Analytics, Time Complexity and Inferential Uncertainty (Version 1.2.7)
2020
TSstudio : Functions for Time Series Analysis and Forecasting (Version 0.1.7)
2018
TcGSA : Time-Course Gene Set Analysis (Version 0.12.10)
2014
Tendril : Compute and Display Tendril Plots (Version 2.0.4)
2020
Tmisc : Turner Miscellaneous (Version 1.0.1)
2015
TopDom : An Efficient and Deterministic Method for Identifying Topological Domains in Genomes (Version 0.10.1)
2021
TopKSignal : A Convex Optimization Tool for Signal Reconstruction from Multiple Ranked Lists (Version 1.0)
2024
TriMatch : Propensity Score Matching of Non-Binary Treatments (Version 0.9.9)
2013
TripleR : Social Relation Model (SRM) Analyses for Single or Multiple Groups (Version 1.5.4)
2009
TropFishR : Tropical Fisheries Analysis (Version 1.6.5)
2016
TwoTimeScales : Analysis of Event Data with Two Time Scales (Version 1.0.0)
0
UPG : Efficient Bayesian Algorithms for Binary and Categorical Data Regression Models (Version 0.3.5)
2021
Umatrix : Visualization of Structures in High-Dimensional Data (Version 4.0.1)
2017
UpDown : Detecting Group Disturbances from Longitudinal Observations (Version 1.2.1)
2023
VDAP : Peptide Array Analysis Tools (Version 2.0.0)
2016
ViSiElse : A Visual Tool for Behavior Analysis over Time (Version 1.2.2)
2016
WINS : The R WINS Package (Version 1.4.2)
2021
WaverideR : Extracting Signals from Wavelet Spectra (Version 0.3.2)
2023
WebAnalytics : Web Server Log Analysis (Version 0.9.12)
2022
WordListsAnalytics : Multiple Data Analysis Tools for Property Listing Tasks (Version 0.2.4)
2024
ZetaSuite : Analyze High-Dimensional High-Throughput Dataset and Quality Control Single-Cell RNA-Seq (Version 1.0.1)
2022
aLFQ : Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data (Version 1.3.6)
2013
aMNLFA : Automated Moderated Nonlinear Factor Analysis Using 'M-plus' (Version 1.1.2)
2018
aPEAR : Advanced Pathway Enrichment Analysis Representation (Version 1.0.0)
2023
actel : Acoustic Telemetry Data Analysis (Version 1.3.0)
2020
adace : Estimator of the Adherer Average Causal Effect (Version 1.0.2)
2022
adegenet : Exploratory Analysis of Genetic and Genomic Data (Version 2.1.10)
2007
adept : Adaptive Empirical Pattern Transformation (Version 1.2)
2019
admix : Package Admix for Admixture (aka Contamination) Models (Version 2.3.3)
2021
afex : Analysis of Factorial Experiments (Version 1.4-1)
2012
agridat : Agricultural Datasets (Version 1.24)
2011
aiRly : R Wrapper for 'Airly' API (Version 0.1.0)
2020
aifeducation : Artificial Intelligence for Education (Version 1.0.0)
2023
aldvmm : Adjusted Limited Dependent Variable Mixture Models (Version 0.8.8)
2021
allMT : Acute Lymphoblastic Leukemia Maintenance Therapy Analysis (Version 0.1.0)
2023
alluvial : Alluvial Diagrams (Version 0.1-2)
2016
ammistability : Additive Main Effects and Multiplicative Interaction Model Stability Parameters (Version 0.1.4)
2018
anabel : Analysis of Binding Events + l (Version 3.0.1)
2023
analyzer : Data Analysis and Automated R Notebook Generation (Version 1.0.1)
2020
animint2 : Animated Interactive Grammar of Graphics (Version 2024.11.2)
2019
archeoViz : Visualisation, Exploration, and Web Communication of Archaeological Spatial Data (Version 1.3.5)
2023
aslib : Interface to the Algorithm Selection Benchmark Library (Version 0.1.2)
2016
asremlPlus : Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences (Version 4.4.43)
2015
assignPOP : Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework (Version 1.3.0)
2016
atable : Create Tables for Reporting Clinical Trials (Version 0.1.15)
2018
augmentedRCBD : Analysis of Augmented Randomised Complete Block Designs (Version 0.1.7)
2018
backShift : Learning Causal Cyclic Graphs from Unknown Shift Interventions (Version 0.1.4.3)
2015
baker : "Nested Partially Latent Class Models" (Version 1.0.3)
2022
baseballr : Acquiring and Analyzing Baseball Data (Version 1.6.0)
2022
bayefdr : Bayesian Estimation and Optimisation of Expected False Discovery Rate (Version 0.2.1)
2020
bayesPop : Probabilistic Population Projection (Version 10.0-1)
2012
bayesdfa : Bayesian Dynamic Factor Analysis (DFA) with 'Stan' (Version 1.3.3)
2018
bayesplot : Plotting for Bayesian Models (Version 1.11.1)
2016
bayesvl : Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' (Version 0.8.5)
2019
beezdemand : Behavioral Economic Easy Demand (Version 0.1.2)
2018
bikm1 : Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets (Version 1.1.0)
2019
bioclim : Bioclimatic Analysis and Classification (Version 0.4.0)
2022
biomod2 : Ensemble Platform for Species Distribution Modeling (Version 4.2-5-2)
2012
birdscanR : Migration Traffic Rate Calculation Package for 'Birdscan MR1' Radars (Version 0.3.0)
2023
blrm : Dose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling (Version 1.0-2)
2019
bmlm : Bayesian Multilevel Mediation (Version 1.3.15)
2016
bmscstan : Bayesian Multilevel Single Case Models using 'Stan' (Version 1.2.1.0)
2020
bnmonitor : An Implementation of Sensitivity Analysis in Bayesian Networks (Version 0.2.2)
2021
bodenmiller : Profiling of Peripheral Blood Mononuclear Cells using CyTOF (Version 0.1.1)
2015
bootCT : Bootstrapping the ARDL Tests for Cointegration (Version 2.1.0)
2022
boral : Bayesian Ordination and Regression AnaLysis (Version 2.0.2)
2014
bridgedist : An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003) (Version 0.1.3)
2016
bulletr : Algorithms for Matching Bullet Lands (Version 0.1)
2017
burnr : Forest Fire History Analysis (Version 0.6.1)
2016
camtrapR : Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses (Version 2.3.0)
2015
cancerGI : Analyses of Cancer Gene Interaction (Version 1.0.1)
2016
caret : Classification and Regression Training (Version 7.0-1)
2007
cartograflow : Filtering Matrix for Flow Mapping (Version 1.0.5)
2019
cassandRa : Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks (Version 0.2.0)
2019
causalPAF : Causal Effect for Population Attributable Fractions (PAF) (Version 1.2.5)
2021
causaldrf : Estimating Causal Dose Response Functions (Version 0.4.2)
2015
cellWise : Analyzing Data with Cellwise Outliers (Version 2.5.3)
2016
chem16S : Chemical Metrics for Microbial Communities (Version 1.1.0)
2023
childsds : Data and Methods Around Reference Values in Pediatrics (Version 0.8.0)
2014
chillR : Statistical Methods for Phenology Analysis in Temperate Fruit Trees (Version 0.76)
2013
chooseGCM : Selecting General Circulation Models for Species Distribution Modeling (Version 1.0.1)
2024
classmap : Visualizing Classification Results (Version 1.2.3)
2021
clhs : Conditioned Latin Hypercube Sampling (Version 0.9.0)
2012
clickstream : Analyzes Clickstreams Based on Markov Chains (Version 1.3.3)
2014
clifro : Easily Download and Visualise Climate Data from CliFlo (Version 3.2-5)
2015
clmplus : Tool-Box of Chain Ladder Plus Models (Version 1.0.0)
2022
clustMD : Model Based Clustering for Mixed Data (Version 1.2.1)
2014
clustNet : Network-Based Clustering (Version 1.2.0)
2023
clusterMI : Cluster Analysis with Missing Values by Multiple Imputation (Version 1.3)
2024
cmahalanobis : Calculate Distance Measures for a Given List of Data Frames with Factors (Version 0.4.2)
2024
codyn : Community Dynamics Metrics (Version 2.0.5)
2015
coefplot : Plots Coefficients from Fitted Models (Version 1.2.8)
2011
colorBlindness : Safe Color Set for Color Blindness (Version 0.1.9)
2020
communication : Feature Extraction and Model Estimation for Audio of Human Speech (Version 0.1)
2021
compareMCMCs : Compare MCMC Efficiency from 'nimble' and/or Other MCMC Engines (Version 0.6.0)
2022
complexlm : Linear Fitting for Complex Valued Data (Version 1.1.2)
2023
compositeReliabilityInNestedDesigns : Optimizing the Composite Reliability in Multivariate Nested Designs (Version 1.0.4)
2024
conText : 'a la Carte' on Text (ConText) Embedding Regression (Version 1.4.3)
2021
conos : Clustering on Network of Samples (Version 1.5.2)
2021
contsurvplot : Visualize the Effect of a Continuous Variable on a Time-to-Event Outcome (Version 0.2.1)
2022
cooccur : Probabilistic Species Co-Occurrence Analysis in R (Version 1.3)
2014
corona : Coronavirus ('Rona') Data Exploration (Version 0.3.0)
2020
cosimmr : Fast Fitting of Stable Isotope Mixing Models with Covariates (Version 1.0.12)
2024
countfitteR : Comprehensive Automatized Evaluation of Distribution Models for Count Data (Version 1.4)
2019
covdepGE : Covariate Dependent Graph Estimation (Version 1.0.1)
2022
cplm : Compound Poisson Linear Models (Version 0.7-12.1)
2011
crctStepdown : Univariate Analysis of Cluster Trials with Multiple Outcomes (Version 0.5.2)
2021
critpath : Setting the Critical Path in Project Management (Version 0.2.2)
2021
csa : A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration (Version 0.7.1)
2020
csdata : Structural Data for Norway (Version 2024.4.26)
2022
csodata : Download Data from the CSO 'PxStat' API (Version 1.5.0)
2019
cuRe : Parametric Cure Model Estimation (Version 1.1.1)
2020
cytofan : Plot Fan Plots for Cytometry Data using 'ggplot2' (Version 0.1.0)
2018
dartR.base : Analysing 'SNP' and 'Silicodart' Data - Basic Functions (Version 0.98)
2023
dartR.captive : Analysing 'SNP' Data to Support Captive Breeding (Version 0.75)
2023
dartR.popgen : Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 1.0.0)
2023
dartR.sim : Computer Simulations of 'SNP' Data (Version 0.70)
2023
dartR : Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 2.9.7)
2017
data360r : Wrapper for 'TCdata360' and 'Govdata360' API (Version 1.0.9)
2017
dataprep : Efficient and Flexible Data Preprocessing Tools (Version 0.1.5)
2021
datplot : Preparation of Object Dating Ranges for Density Plots (Aoristic Analysis) (Version 1.1.1)
2021
dbhydroR : 'DBHYDRO' Hydrologic and Water Quality Data (Version 0.2-8)
2016
dbmss : Distance-Based Measures of Spatial Structures (Version 2.9-2)
2012
demic : Dynamic Estimator of Microbial Communities (Version 2.0.0)
2024
dendroNetwork : Create Networks of Dendrochronological Series using Pairwise Similarity (Version 0.5.4)
2024
dendroTools : Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data (Version 1.2.13)
2017
denovolyzeR : Statistical Analyses of De Novo Genetic Variants (Version 0.2.0)
2015
desplot : Plotting Field Plans for Agricultural Experiments (Version 1.10)
2015
detectRUNS : Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes (Version 0.9.6)
2018
dgpsi : Interface to 'dgpsi' for Deep and Linked Gaussian Process Emulations (Version 2.5.0)
2022
diffEnrich : Given a List of Gene Symbols, Performs Differential Enrichment Analysis (Version 0.1.2)
2019
diverse : Diversity Measures for Complex Systems (Version 0.1.5)
2015
dlim : Distributed Lag Interaction Model (Version 0.1.0)
2024
do : Data Operator (Version 2.0.0.1)
2019
dominanceanalysis : Dominance Analysis (Version 2.1.0)
2019
drimmR : Estimation, Simulation and Reliability of Drifting Markov Models (Version 1.0.1)
2021
drpop : Efficient and Doubly Robust Population Size Estimation (Version 0.0.3)
2021
dsa : Seasonal Adjustment of Daily Time Series (Version 1.0.12)
2018
dtwclust : Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance (Version 6.0.0)
2015
dynRB : Dynamic Range Boxes (Version 0.18)
2015
dynr : Dynamic Models with Regime-Switching (Version 0.1.16-105)
2016
dynwrap : Representing and Inferring Single-Cell Trajectories (Version 1.2.4)
2019
eSIR : Extended State-Space SIR Models (Version 0.4.2)
2021
eat : Efficiency Analysis Trees (Version 0.1.4)
2021
eatRep : Educational Assessment Tools for Replication Methods (Version 0.14.7)
2021
ebvcube : Working with netCDF for Essential Biodiversity Variables (Version 0.3.3)
2022
econullnetr : Null Model Analysis for Ecological Networks (Version 0.2.1)
2017
ecotraj : Ecological Trajectory Analysis (Version 0.1.1)
2021
ecostats : Code and Data Accompanying the Eco-Stats Text (Warton 2022) (Version 1.2.1)
2020
ecr : Evolutionary Computation in R (Version 2.1.1)
2016
edina : Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model (Version 0.1.1)
2020
effectR : Predicts Oomycete Effectors (Version 1.0.2)
2018
eirm : Explanatory Item Response Modeling for Dichotomous and Polytomous Items (Version 0.5)
2020
elaborator : A 'shiny' Application for Exploring Laboratory Data (Version 1.3.4)
2020
emdi : Estimating and Mapping Disaggregated Indicators (Version 2.2.2)
2016
enpls : Ensemble Partial Least Squares Regression (Version 6.1)
2014
ensembleTax : Ensemble Taxonomic Assignments of Amplicon Sequencing Data (Version 1.1.1)
2021
entropart : Entropy Partitioning to Measure Diversity (Version 1.6-15)
2013
epca : Exploratory Principal Component Analysis (Version 1.1.0)
2020
epinetr : Epistatic Network Modelling with Forward-Time Simulation (Version 0.96)
2020
ethnobotanyR : Calculate Quantitative Ethnobotany Indices (Version 0.1.9)
2019
etrm : Energy Trading and Risk Management (Version 1.0.1)
2021
evolqg : Evolutionary Quantitative Genetics (Version 0.3-4)
2015
expDB : Database for Experiment Dataset (Version 0.1.0)
2021
explainer : Machine Learning Model Explainer (Version 1.0.2)
2023
exreport : Fast, Reliable and Elegant Reproducible Research (Version 0.4.1)
2015
exvatools : Value Added in Exports and Other Input-Output Table Analysis Tools (Version 0.9.0)
2022
ez : Easy Analysis and Visualization of Factorial Experiments (Version 4.4-0)
2009
fSRM : Social Relations Analyses with Roles ("Family SRM") (Version 0.6.5)
2014
fabisearch : Change Point Detection in High-Dimensional Time Series Networks (Version 0.0.4.5)
2021
factoextra : Extract and Visualize the Results of Multivariate Data Analyses (Version 1.0.7)
2016
fastcpd : Fast Change Point Detection via Sequential Gradient Descent (Version 0.14.6)
2023
fastml : Fast Machine Learning Model Training and Evaluation (Version 0.3.0)
2024
fcm : Inference of Fuzzy Cognitive Maps (FCMs) (Version 0.1.3)
2017
fdaPOIFD : Partially Observed Integrated Functional Depth (Version 1.0.3)
2021
fdapaceShiny : A Shiny App for the 'fdapace' Package (Version 1.0.5)
2021
fddm : Fast Implementation of the Diffusion Decision Model (Version 1.0-2)
2020
fergm : Estimation and Fit Assessment of Frailty Exponential Random Graph Models (Version 1.1.4)
2017
figuRes2 : Support for a Variety of Figure Production Tasks (Version 1.0.0)
2022
firebehavioR : Prediction of Wildland Fire Behavior and Hazard (Version 0.1.2)
2018
fitHeavyTail : Mean and Covariance Matrix Estimation under Heavy Tails (Version 0.2.0)
2019
fitODBOD : Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD (Version 1.5.4)
2018
fitbitViz : 'Fitbit' Visualizations (Version 1.0.6)
2021
fmriqa : Functional MRI Quality Assurance Routines (Version 0.3.0)
2017
footBayes : Fitting Bayesian and MLE Football Models (Version 0.2.0)
2022
foqat : Field Observation Quick Analysis Toolkit (Version 2.0.8.2)
2021
forensIT : Information Theory Tools for Forensic Analysis (Version 1.0.0)
2023
forestPSD : Forest Population Structure and Numeric Dynamics (Version 1.0.0)
2024
frailtySurv : General Semiparametric Shared Frailty Model (Version 1.3.8)
2015
freesurfer : Wrapper Functions for 'Freesurfer' (Version 1.6.10)
2016
frequencyConnectedness : Spectral Decomposition of Connectedness Measures (Version 0.2.4)
2017
funData : An S4 Class for Functional Data (Version 1.3-9)
2016
funModeling : Exploratory Data Analysis and Data Preparation Tool-Box (Version 1.9.5)
2016
funtimes : Functions for Time Series Analysis (Version 9.1)
2015
gWQS : Generalized Weighted Quantile Sum Regression (Version 3.0.5)
2016
gamlss.ggplots : Plotting Functions for Generalized Additive Model for Location Scale and Shape (Version 2.1-12)
2022
gapmap : Drawing Gapped Cluster Heatmaps with 'ggplot2' (Version 1.0.0)
2014
gdm : Generalized Dissimilarity Modeling (Version 1.6.0-4)
2015
genBaRcode : Analysis and Visualization Tools for Genetic Barcode Data (Version 1.2.7)
2017
geneHapR : Gene Haplotype Statistics, Phenotype Association and Visualization (Version 1.2.4)
2022
genekitr : Gene Analysis Toolkit (Version 1.2.8)
2021
geneticae : Statistical Tools for the Analysis of Multi Environment Agronomic Trials (Version 0.4.0)
2021
geocmeans : Implementing Methods for Spatial Fuzzy Unsupervised Classification (Version 0.3.4)
2021
germinationmetrics : Seed Germination Indices and Curve Fitting (Version 0.1.8)
2018
gfoRmulaICE : Parametric Iterative Conditional Expectation G-Formula (Version 0.1.0)
2024
ggQC : Quality Control Charts for 'ggplot' (Version 0.0.31)
2017
ggaligner : Visualizing Sequence Alignment by Generating Publication-Ready Plots (Version 0.1)
2023
ggalt : Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2' (Version 0.4.0)
2016
ggcorrplot : Visualization of a Correlation Matrix using 'ggplot2' (Version 0.1.4.1)
2016
gge : Genotype Plus Genotype-by-Environment Biplots (Version 1.9)
2015
ggenealogy : Visualization Tools for Genealogical Data (Version 1.0.3)
2015
ggforce : Accelerating 'ggplot2' (Version 0.4.2)
2016
ggiraphExtra : Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph' (Version 0.3.0)
2016
ggparallel : Variations of Parallel Coordinate Plots for Categorical Data (Version 0.4.0)
2012
ggrisk : Risk Score Plot for Cox Regression (Version 1.3)
2020
ggscidca : Plotting Decision Curve Analysis with Coloured Bars (Version 0.2.3)
2024
ggsector : Draw Sectors (Version 1.7.0)
2022
ggswissmaps : Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects (Version 0.1.1)
2014
ghcm : Functional Conditional Independence Testing with the GHCM (Version 3.0.1)
2021
ghypernet : Fit and Simulate Generalised Hypergeometric Ensembles of Graphs (Version 1.1.0)
2020
glmmPen : High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) (Version 1.5.4.8)
2022
glmmTMB : Generalized Linear Mixed Models using Template Model Builder (Version 1.1.10)
2017
glmmfields : Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling (Version 0.1.8)
2018
grabsampling : Probability of Detection for Grab Sample Selection (Version 1.0.0)
2020
grandR : Comprehensive Analysis of Nucleotide Conversion Sequencing Data (Version 0.2.5)
2022
grapesAgri1 : Collection of Shiny Apps for Agricultural Research Data Analysis (Version 1.1.0)
2021
graphPAF : Estimating and Displaying Population Attributable Fractions (Version 2.0.0)
2022
grapherator : A Modular Multi-Step Graph Generator (Version 1.0.0)
2017
gridsampler : A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies (Version 0.6)
2016
growfunctions : Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data (Version 0.16)
2014
gspcr : Generalized Supervised Principal Component Regression (Version 0.9.5)
2023
gstar : Generalized Space-Time Autoregressive Model (Version 0.1.0)
2019
gumboot : Bootstrap Analyses of Sampling Uncertainty in Goodness-of-Fit Statistics (Version 1.0.1)
2021
hJAM : Hierarchical Joint Analysis of Marginal Summary Statistics (Version 1.0.0)
2020
handwriter : Handwriting Analysis in R (Version 3.2.3)
2021
handwriterRF : Handwriting Analysis with Random Forests (Version 1.0.2)
2024
hdf5r : Interface to the 'HDF5' Binary Data Format (Version 1.3.11)
2017
hdflex : High-Dimensional Aggregate Density Forecasts (Version 0.3.0)
2023
heatmaply : Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' (Version 1.5.0)
2016
heplots : Visualizing Hypothesis Tests in Multivariate Linear Models (Version 1.7.1)
2007
heuristica : Heuristics Including Take the Best and Unit-Weight Linear (Version 1.0.3)
2016
hilbertSimilarity : Hilbert Similarity Index for High Dimensional Data (Version 0.4.3)
2019
hlaR : Tools for HLA Data (Version 1.0.0)
2021
hybridModels : An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks (Version 0.3.7)
2016
hydraulics : Basic Pipe and Open Channel Hydraulics (Version 0.7.1)
2020
hydroToolkit : Hydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile (Version 0.1.0)
2020
hydroroute : Trace Longitudinal Hydropeaking Waves (Version 0.1.2)
2022
hydrotoolbox : Hydrological Tools for Handling Hydro-Meteorological Data Records (Version 1.1.2)
2021
hyfo : Hydrology and Climate Forecasting (Version 1.4.6)
2015
iCARH : Integrative Conditional Autoregressive Horseshoe Model (Version 2.0.2.1)
2019
iNEXT.3D : Interpolation and Extrapolation for Three Dimensions of Biodiversity (Version 1.0.6)
2024
iNEXT.4steps : Four-Step Biodiversity Analysis Based on 'iNEXT' (Version 1.0.1)
2024
iNEXT : Interpolation and Extrapolation for Species Diversity (Version 3.0.1)
2015
ibawds : Functions and Datasets for the Data Science Course at IBAW (Version 1.0.0)
2021
icardaFIGSr : Subsetting using Focused Identification of the Germplasm Strategy (FIGS) (Version 1.0.2)
2021
icpack : Survival Analysis of Interval-Censored Data (Version 0.1.0)
2024
idopNetwork : A Network Tool to Dissect Spatial Community Ecology (Version 0.1.2)
2022
ifaTools : Toolkit for Item Factor Analysis with 'OpenMx' (Version 0.23)
2015
iheatmapr : Interactive, Complex Heatmaps (Version 0.7.1)
2017
immunarch : Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires (Version 0.9.1)
2020
immuneSIM : Tunable Simulation of B- And T-Cell Receptor Repertoires (Version 0.8.7)
2019
imputeR : A General Multivariate Imputation Framework (Version 2.2)
2014
imputeTestbench : Test Bench for the Comparison of Imputation Methods (Version 3.0.3)
2016
inTextSummaryTable : Creation of in-Text Summary Table (Version 3.3.3)
2021
infinitefactor : Bayesian Infinite Factor Models (Version 1.0)
2020
intRinsic : Likelihood-Based Intrinsic Dimension Estimators (Version 1.1.0)
2022
interlineaR : Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software (Version 1.0)
2018
intradayModel : Modeling and Forecasting Financial Intraday Signals (Version 0.0.1)
2023
iprior : Regression Modelling using I-Priors (Version 0.7.4)
2016
irtQ : Unidimensional Item Response Theory Modeling (Version 0.2.1)
2023
irtrees : Estimation of Tree-Based Item Response Models (Version 1.0.0)
2012
isobxr : Stable Isotope Box Modelling in R (Version 2.0.0)
2021
ivmodel : Statistical Inference and Sensitivity Analysis for Instrumental Variables Model (Version 1.9.1)
2015
jtdm : Joint Modelling of Functional Traits (Version 0.1-3)
2023
kaos : Encoding of Sequences Based on Frequency Matrix Chaos Game Representation (Version 0.1.2)
2019
kehra : Collect, Assemble and Model Air Pollution, Weather and Health Data (Version 0.1)
2016
kergp : Gaussian Process Laboratory (Version 0.5.8)
2015
kerntools : Kernel Functions and Tools for Machine Learning Applications (Version 1.1.0)
2024
kgraph : Knowledge Graphs Constructions and Visualizations (Version 1.0.0)
2024
knitrBootstrap : 'knitr' Bootstrap Framework (Version 1.0.3)
2013
laketemps : Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009 (Version 0.5.1)
2015
lans2r : Work with Look at NanoSIMS Data in R (Version 1.2.0)
2017
lavaSearch2 : Tools for Model Specification in the Latent Variable Framework (Version 2.0.3)
2018
lda : Collapsed Gibbs Sampling Methods for Topic Models (Version 1.5.2)
2009
ldatuning : Tuning of the Latent Dirichlet Allocation Models Parameters (Version 1.0.2)
2015
lddmm : Longitudinal Drift-Diffusion Mixed Models (LDDMM) (Version 0.4.2)
2021
lfproQC : Quality Control for Label-Free Proteomics Expression Data (Version 1.4.0)
2024
likert : Analysis and Visualization Likert Items (Version 1.3.5)
2013
lipidomeR : Integrative Visualizations of the Lipidome (Version 0.1.2)
2020
lolog : Latent Order Logistic Graph Models (Version 1.3.1)
2018
longreadvqs : Viral Quasispecies Comparison from Long-Read Sequencing Data (Version 0.1.3)
2024
lsbclust : Least-Squares Bilinear Clustering for Three-Way Data (Version 1.1)
2015
lsl : Latent Structure Learning (Version 0.5.6)
2015
mFD : Compute and Illustrate the Multiple Facets of Functional Diversity (Version 1.0.7)
2021
macrosyntR : Draw Ordered Oxford Grids and Chord Diagrams (Version 0.3.3)
2023
mandelbrot : Generates Views on the Mandelbrot Set (Version 0.2.0)
2017
manhplot : The Manhattan++ Plot (Version 1.1)
2019
mapStats : Geographic Display of Survey Data Statistics (Version 3.1)
2014
mappoly : Genetic Linkage Maps in Autopolyploids (Version 0.4.1)
2020
marmap : Import, Plot and Analyze Bathymetric and Topographic Data (Version 1.0.10)
2013
matricks : Useful Tricks for Matrix Manipulation (Version 0.8.2)
2020
matrixStrucTest : Tests of Matrix Structure for Construct Validation (Version 1.0.0)
2019
matrixdist : Statistics for Matrix Distributions (Version 1.1.9)
2021
mbsts : Multivariate Bayesian Structural Time Series (Version 3.0)
2020
mcb : Model Confidence Bounds (Version 0.1.15)
2020
mcvis : Multi-Collinearity Visualization (Version 1.0.8)
2020
mdpeer : Graph-Constrained Regression with Enhanced Regularization Parameters Selection (Version 1.0.1)
2016
meconetcomp : Compare Microbial Networks of 'trans_network' Class of 'microeco' Package (Version 0.5.1)
2022
medicalrisk : Medical Risk and Comorbidity Tools for ICD-9-CM Data (Version 1.3)
2015
metR : Tools for Easier Analysis of Meteorological Fields (Version 0.16.0)
2018
metadeconfoundR : Covariate-Sensitive Analysis of Cross-Sectional High-Dimensional Data (Version 1.0.2)
2024
metafolio : Metapopulation Simulations for Conserving Salmon Through Portfolio Optimization (Version 0.1.2)
2014
metamicrobiomeR : Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects (Version 1.2)
2019
metaprotr : Metaproteomics Post-Processing Analysis (Version 1.2.2)
2021
mfpp : 'Matrix-Based Flexible Project Planning' (Version 0.0.8)
2022
mgc : Multiscale Graph Correlation (Version 2.0.2)
2018
mhtboot : Multiple Hypothesis Test Based on Distribution of p Values (Version 1.3.3)
2016
miRetrieve : miRNA Text Mining in Abstracts (Version 1.3.4)
2021
microeco : Microbial Community Ecology Data Analysis (Version 1.11.0)
2020
microplot : Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel' (Version 1.0-45)
2016
mipplot : An Open-Source Tool for Visualization of Climate Mitigation Scenarios (Version 0.3.1)
2021
mispitools : Missing Person Identification Tools (Version 1.2.0)
2021
mizer : Dynamic Multi-Species Size Spectrum Modelling (Version 2.5.3)
2013
mlergm : Multilevel Exponential-Family Random Graph Models (Version 0.8)
2018
mlrMBO : Bayesian Optimization and Model-Based Optimization of Expensive Black-Box Functions (Version 1.1.5.1)
2017
mlxR : Simulation of Longitudinal Data (Version 4.2.0)
2015
moderate.mediation : Causal Moderated Mediation Analysis (Version 0.0.10)
2023
modnets : Modeling Moderated Networks (Version 0.9.0)
2021
morph : 3D Segmentation of Voxels into Morphologic Classes (Version 1.1.0)
2021
morse : Modelling Reproduction and Survival Data in Ecotoxicology (Version 3.3.4)
2014
mortAAR : Analysis of Archaeological Mortality Data (Version 1.1.6)
2017
mosaicData : Project MOSAIC Data Sets (Version 0.20.4)
2014
motifr : Motif Analysis in Multi-Level Networks (Version 1.0.0)
2020
mplot : Graphical Model Stability and Variable Selection Procedures (Version 1.0.6)
2015
mpower : Power Analysis via Monte Carlo Simulation for Correlated Data (Version 0.1.0)
2022
mrct : Outlier Detection of Functional Data Based on the Minimum Regularized Covariance Trace Estimator (Version 0.0.1.0)
2023
mrfDepth : Depth Measures in Multivariate, Regression and Functional Settings (Version 1.0.17)
2017
mstclustering : "MST-Based Clustering" (Version 1.0.0.0)
2022
mudfold : Multiple UniDimensional unFOLDing (Version 1.1.21)
2017
multibreakeR : Tests for a Structural Change in Multivariate Time Series (Version 0.1.0)
2023
multifear : Multiverse Analyses for Conditioning Data (Version 0.1.3)
2021
multivar : Penalized Estimation of Multiple-Subject Vector Autoregressive (multi-VAR) Models (Version 1.1.0)
2020
musclesyneRgies : Extract Muscle Synergies from Electromyography (Version 1.2.5)
2022
mutSignatures : Decipher Mutational Signatures from Somatic Mutational Catalogs (Version 2.1.1)
2017
mvdalab : Multivariate Data Analysis Laboratory (Version 1.7)
2016
mvnimpute : Simultaneously Impute the Missing and Censored Values (Version 1.0.1)
2022
mxfda : A Functional Data Analysis Package for Spatial Single Cell Data (Version 0.2.2)
2024
nLTT : Calculate the NLTT Statistic (Version 1.4.9)
2015
nandb : Number and Brightness Image Analysis (Version 2.1.0)
2017
nc : Named Capture to Data Tables (Version 2024.9.20)
2019
ncappc : NCA Calculations and Population Model Diagnosis (Version 0.3.0)
2015
nestedpp : Performance Profiles and Nested Performance Profiles (Version 0.2.0)
2022
netcom : NETwork COMparison Inference (Version 2.1.7)
2017
netgsa : Network-Based Gene Set Analysis (Version 4.0.5)
2014
networktools : Tools for Identifying Important Nodes in Networks (Version 1.5.2)
2017
networktree : Recursive Partitioning of Network Models (Version 1.0.1)
2018
neurobase : 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects (Version 1.32.4)
2016
nonmem2R : Loading NONMEM Output Files with Functions for Visual Predictive Checks (VPC) and Goodness of Fit (GOF) Plots (Version 0.2.5)
2016
nonsmooth : Nonparametric Methods for Smoothing Nonsmooth Data (Version 1.0.0)
2024
nser : Bhavcopy and Live Market Data from National Stock Exchange (NSE) & Bombay Stock Exchange (BSE) India (Version 1.5.3)
2021
oRus : Operational Research User Stories (Version 1.0.0)
2020
oaxaca : Blinder-Oaxaca Decomposition (Version 0.1.5)
2014
obAnalytics : Limit Order Book Analytics (Version 0.1.1)
2016
oceanmap : A Plotting Toolbox for 2D Oceanographic Data (Version 0.1.6)
2016
onemap : Construction of Genetic Maps in Experimental Crosses (Version 3.0.0)
2008
optiSel : Optimum Contribution Selection and Population Genetics (Version 2.0.9)
2016
opticskxi : OPTICS K-Xi Density-Based Clustering (Version 1.1.0)
2019
ordinalLBM : Co-Clustering of Ordinal Data via Latent Continuous Random Variables (Version 1.0)
2019
otuSummary : Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres (Version 0.1.2)
2018
outreg : Regression Table for Publication (Version 0.2.2)
2017
pRF : Permutation Significance for Random Forests (Version 1.2)
2015
pals : Color Palettes, Colormaps, and Tools to Evaluate Them (Version 1.9)
2016
panelvar : Panel Vector Autoregression (Version 0.5.6)
2018
patientProfilesVis : Visualization of Patient Profiles (Version 2.0.9)
2021
pcFactorStan : Stan Models for the Paired Comparison Factor Model (Version 1.5.4)
2019
pctax : Professional Comprehensive Omics Data Analysis (Version 0.1.3)
2024
pcutils : Some Useful Functions for Statistics and Visualization (Version 0.2.7)
2023
pdSpecEst : An Analysis Toolbox for Hermitian Positive Definite Matrices (Version 1.2.4)
2017
penppml : Penalized Poisson Pseudo Maximum Likelihood Regression (Version 0.2.3)
2021
petersenlab : A Collection of R Functions by the Petersen Lab (Version 1.0.0)
2024
pgsc : Computes Powell's Generalized Synthetic Control Estimator (Version 1.0.0)
2018
phase1PRMD : Personalized Repeated Measurement Design for Phase I Clinical Trials (Version 1.0.2)
2019
phylosamp : Sample Size Calculations for Molecular and Phylogenetic Studies (Version 1.0.1)
2021
phylter : Detect and Remove Outliers in Phylogenomics Datasets (Version 0.9.11)
2023
pingers : Identify, Ping, and Log Internet Provider Connection Data (Version 0.1.1)
2018
pixiedust : Tables so Beautifully Fine-Tuned You Will Believe It's Magic (Version 0.9.4)
2015
plot4fun : Just Plot for Fun (Version 0.1.1)
2024
plotthis : High-Level Plotting Built Upon 'ggplot2' and Other Plotting Packages (Version 0.4.0)
2024
plsgenomics : PLS Analyses for Genomics (Version 1.5-3)
2005
polymapR : Linkage Analysis in Outcrossing Polyploids (Version 1.1.6)
2017
polypoly : Helper Functions for Orthogonal Polynomials (Version 0.0.3)
2021
polyqtlR : QTL Analysis in Autopolyploid Bi-Parental F1 Populations (Version 0.1.1)
2020
pompom : Person-Oriented Method and Perturbation on the Model (Version 0.2.1)
2018
pould : Phased or Unphased Linkage Disequilibrium (Version 1.0.1)
2020
povmap : Extension to the 'emdi' Package (Version 1.0.1)
2023
powerbydesign : Power Estimates for ANOVA Designs (Version 1.0.5)
2016
pqantimalarials : web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa (Version 0.2)
2014
predictMe : Visualize Individual Prediction Performance (Version 0.1)
2022
predict3d : Draw Three Dimensional Predict Plot Using Package 'rgl' (Version 0.1.5)
2019
prepdat : Preparing Experimental Data for Statistical Analysis (Version 1.0.8)
2015
primerTree : Visually Assessing the Specificity and Informativeness of Primer Pairs (Version 1.0.6)
2013
primer : Functions and Data for the Book, a Primer of Ecology with R (Version 1.2.0)
2009
prioriactions : Multi-Action Conservation Planning (Version 0.5.0)
2021
productplots : Product Plots for R (Version 0.1.1)
2011
promor : Proteomics Data Analysis and Modeling Tools (Version 0.2.1)
2022
promotionImpact : Analysis & Measurement of Promotion Effectiveness (Version 0.1.5)
2019
psData : Download Regularly Maintained Political Science Data Sets (Version 0.2.2)
2014
pscore : Standardizing Physiological Composite Risk Endpoints (Version 0.4.0)
2015
psd : Adaptive, Sine-Multitaper Power Spectral Density and Cross Spectrum Estimation (Version 2.1.1)
2013
ptycho : Bayesian Variable Selection with Hierarchical Priors (Version 1.1-4)
2015
puzzle : Assembling Data Sets for Non-Linear Mixed Effects Modeling (Version 0.0.1)
2019
pxR : PC-Axis with R (Version 0.42.7)
2011
qad : Quantification of Asymmetric Dependence (Version 1.0.4)
2018
qape : Quantile of Absolute Prediction Errors (Version 2.1)
2020
qdap : Bridging the Gap Between Qualitative Data and Quantitative Analysis (Version 2.4.6)
2013
qgraph : Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation (Version 1.9.8)
2011
quadrupen : Sparsity by Worst-Case Quadratic Penalties (Version 0.2-12)
2012
quantkriging : Quantile Kriging for Stochastic Simulations with Replication (Version 0.1.0)
2020
quicR : RT-QuIC Data Formatting and Analysis (Version 1.0.2)
2024
r4ss : R Code for Stock Synthesis (Version 1.44.0)
2009
rADA : Statistical Analysis and Cut-Point Determination of Immunoassays (Version 1.1.9)
2021
rAmCharts4 : Interface to the JavaScript Library 'amCharts 4' (Version 1.6.0)
2020
rKOMICS : Minicircle Sequence Classes (MSC) Analyses (Version 1.3)
2021
rYoutheria : Access to the YouTheria Mammal Trait Database (Version 1.0.3)
2014
ragtop : Pricing Equity Derivatives with Extensions of Black-Scholes (Version 1.1.1)
2016
randomForestExplainer : Explaining and Visualizing Random Forests in Terms of Variable Importance (Version 0.10.1)
2017
randomizeR : Randomization for Clinical Trials (Version 3.0.2)
2015
rankrate : Joint Statistical Models for Preference Learning with Rankings and Ratings (Version 1.2.0)
2022
rapportools : Miscellaneous (Stats) Helper Functions with Sane Defaults for Reporting (Version 1.1)
2014
rayshader : Create Maps and Visualize Data in 2D and 3D (Version 0.37.3)
2018
rbcc : Risk-Based Control Charts (Version 0.1.3)
2023
rbi.helpers : 'rbi' Helper Functions (Version 0.4.0)
2019
rbi : Interface to 'LibBi' (Version 1.0.0)
2016
rbiom : Read/Write, Transform, and Summarize 'BIOM' Data (Version 1.0.3)
2020
rcontroll : Individual-Based Forest Growth Simulator 'TROLL' (Version 0.1.2)
2023
rdiversity : Measurement and Partitioning of Similarity-Sensitive Biodiversity (Version 2.2.0)
2017
refund.shiny : Interactive Plotting for Functional Data Analyses (Version 1.0)
2015
refund : Regression with Functional Data (Version 0.1-37)
2010
remaCor : Random Effects Meta-Analysis for Correlated Test Statistics (Version 0.0.18)
2022
remotePARTS : Spatiotemporal Autoregression Analyses for Large Data Sets (Version 1.0.4)
2023
rfordummies : Code Examples to Accompany the Book "R for Dummies" (Version 0.1.6)
2014
rgm : Advanced Inference with Random Graphical Models (Version 1.0.4)
2024
riverconn : Fragmentation and Connectivity Indices for Riverscapes (Version 0.3.31)
2022
rlfsm : Simulations and Statistical Inference for Linear Fractional Stable Motions (Version 1.1.2)
2018
rmcfs : The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery (Version 1.3.6)
2016
rmoo : Multi-Objective Optimization in R (Version 0.2.0)
2020
rnaCrosslinkOO : Analysis of RNA Crosslinking Data (Version 0.1.4)
2024
rnmamod : Bayesian Network Meta-Analysis with Missing Participants (Version 0.4.0)
2021
robCompositions : Compositional Data Analysis (Version 2.4.1)
2009
robustbase : Basic Robust Statistics (Version 0.99-4-1)
2006
robustlmm : Robust Linear Mixed Effects Models (Version 3.3-1)
2013
romic : R for High-Dimensional Omic Data (Version 1.1.3)
2021
rpf : Response Probability Functions (Version 1.0.14)
2012
rrcov3way : Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data (Version 0.5-0)
2017
rrscale : Robust Re-Scaling to Better Recover Latent Effects in Data (Version 1.0)
2019
rtop : Interpolation of Data with Variable Spatial Support (Version 0.6-9)
2013
rtpcr : qPCR Data Analysis (Version 2.0.0)
2024
rusk : Beautiful Graphical Representation of Multiplication Tables on a Modular Circle (Version 0.1.1)
2018
rwty : R We There Yet? Visualizing MCMC Convergence in Phylogenetics (Version 1.0.2)
2016
sValues : Measures of the Sturdiness of Regression Coefficients (Version 0.1.6)
2015
saeTrafo : Transformations for Unit-Level Small Area Models (Version 1.0.4)
2022
sampcompR : Comparing and Visualizing Differences Between Surveys (Version 0.2.6)
2024
santaR : Short Asynchronous Time-Series Analysis (Version 1.2.4)
2018
saotd : Sentiment Analysis of Twitter Data (Version 0.3.1)
2019
sbm : Stochastic Blockmodels (Version 0.4.7)
2020
scCATCH : Single Cell Cluster-Based Annotation Toolkit for Cellular Heterogeneity (Version 3.2.2)
2022
scGate : Marker-Based Cell Type Purification for Single-Cell Sequencing Data (Version 1.6.2)
2022
scITD : Single-Cell Interpretable Tensor Decomposition (Version 1.0.4)
2021
scRNAtools : Single Cell RNA Sequencing Data Analysis Tools (Version 1.0)
2018
scanstatistics : Space-Time Anomaly Detection using Scan Statistics (Version 1.1.1)
2016
scistreer : Maximum-Likelihood Perfect Phylogeny Inference at Scale (Version 1.2.0)
2022
scitb : Provides Some Useful Functions for Making Statistical Tables (Version 0.2.1)
2023
scorecardModelUtils : Credit Scorecard Modelling Utils (Version 0.0.1.0)
2018
scpi : Prediction Intervals for Synthetic Control Methods with Multiple Treated Units and Staggered Adoption (Version 2.2.6)
2022
sctransform : Variance Stabilizing Transformations for Single Cell UMI Data (Version 0.4.1)
2018
sdmpredictors : Species Distribution Modelling Predictor Datasets (Version 0.2.15)
2016
seawaveQ : SEAWAVE-Q Model (Version 2.0.2)
2013
segclust2d : Bivariate Segmentation/Clustering Methods and Tools (Version 0.3.3)
2018
sensitivity : Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.1)
2006
sharpshootR : A Soil Survey Toolkit (Version 2.3.2)
2014
shinyKGode : An Interactive Application for ODE Parameter Inference Using Gradient Matching (Version 1.0.5)
2017
shinystan : Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models (Version 2.6.0)
2015
signed.backbones : Extract the Signed Backbones of Weighted Networks (Version 0.91.5)
2021
siland : Spatial Influence of Landscape (Version 3.0.2)
2017
simdata : Generate Simulated Datasets (Version 0.4.1)
2024
simmr : A Stable Isotope Mixing Model (Version 0.5.1.217)
2015
simrel : Simulation of Multivariate Linear Model Data (Version 2.1.0)
2014
simulariatools : Simularia Tools for the Analysis of Air Pollution Data (Version 2.5.1)
2021
singleCellHaystack : A Universal Differential Expression Prediction Tool for Single-Cell and Spatial Genomics Data (Version 1.0.2)
2020
sitepickR : Two-Level Sample Selection with Optimal Site Replacement (Version 0.0.1)
2022
snpReady : Preparing Genotypic Datasets in Order to Run Genomic Analysis (Version 0.9.6)
2017
snplinkage : Single Nucleotide Polymorphisms Linkage Disequilibrium Visualizations (Version 1.2.0)
2023
soc.ca : Specific Correspondence Analysis for the Social Sciences (Version 0.8.0)
2014
socialmixr : Social Mixing Matrices for Infectious Disease Modelling (Version 0.4.0)
2018
somspace : Spatial Analysis with Self-Organizing Maps (Version 1.2.4)
2019
sparklyr : R Interface to Apache Spark (Version 1.8.6)
2016
sparsevar : Sparse VAR/VECM Models Estimation (Version 0.1.0)
2016
spatialwarnings : Spatial Early Warning Signals of Ecosystem Degradation (Version 3.1.0)
2017
speaq : Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations (Version 2.7.0)
2015
specieschrom : The Species Chromatogram (Version 1.0.0)
2022
spectacles : Storing, Manipulating and Analysis Spectroscopy and Associated Data (Version 0.5-4)
2017
spectralR : Obtain and Visualize Spectral Reflectance Data for Earth Surface Polygons (Version 0.1.3)
2022
ssMRCD : Spatially Smoothed MRCD Estimator (Version 1.1.0)
2023
ssdtools : Species Sensitivity Distributions (Version 2.1.0)
2018
stability : Stability Analysis of Genotype by Environment Interaction (GEI) (Version 0.6.0)
2018
stacomiR : Fish Migration Monitoring (Version 0.6.1)
2017
statVisual : Statistical Visualization Tools (Version 1.2.1)
2019
statcanR : Client for Statistics Canada's Open Economic Data (Version 0.2.6)
2019
statgenHTP : High Throughput Phenotyping (HTP) Data Analysis (Version 1.0.7)
2021
stepgbm : Stepwise Variable Selection for Generalized Boosted Regression Modeling (Version 1.0.1)
2021
steprf : Stepwise Predictive Variable Selection for Random Forest (Version 1.0.2)
2021
superb : Summary Plots with Adjusted Error Bars (Version 0.95.19)
2021
survSens : Sensitivity Analysis with Time-to-Event Outcomes (Version 1.1.0)
2020
survout : Excel Conversion of R Surival Analysis Output (Version 0.1.0)
2022
svars : Data-Driven Identification of SVAR Models (Version 1.3.11)
2017
swag : Sparse Wrapper Algorithm (Version 0.1.0)
2020
sysid : System Identification in R (Version 1.0.4)
2017
tableone : Create 'Table 1' to Describe Baseline Characteristics with or without Propensity Score Weights (Version 0.13.2)
2014
tashu : Analysis and Prediction of Bicycle Rental Amount (Version 0.1.1)
2019
tcgaViz : Visualization Tool for the Cancer Genome Atlas Program (TCGA) (Version 1.0.2)
2022
tci : Target Controlled Infusion (TCI) (Version 0.2.0)
2021
tcplfit2 : A Concentration-Response Modeling Utility (Version 0.1.7)
2021
tcpl : ToxCast Data Analysis Pipeline (Version 3.2.0)
2016
telefit : Estimation and Prediction for Remote Effects Spatial Process Models (Version 1.0.3)
2018
telraamStats : Retrieval and Visualization of Mobility Data from 'Telraam' Sensors (Version 1.1.2)
2024
tensorEVD : A Fast Algorithm to Factorize High-Dimensional Tensor Product Matrices (Version 0.1.4)
2023
testarguments : Test (Multiple) Arguments of a User-Defined Prediction Algorithm (Version 0.0.1)
2021
testcorr : Testing Zero Correlation (Version 0.2.0)
2020
tetraclasse : Satisfaction Analysis using Tetraclasse Model and Llosa Matrix (Version 0.1.21)
2017
theftdlc : Analyse and Interpret Time Series Features (Version 0.1.2)
2024
tictactoe : Tic-Tac-Toe Game (Version 0.2.2)
2016
tidytext : Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools (Version 0.4.2)
2019
tldr : T Loux Doing R: Functions to Simplify Data Analysis and Reporting (Version 0.4.0)
2021
tmpm : Trauma Mortality Prediction Model (Version 1.0.3)
2016
toolmaRk : Tests for Same-Source of Toolmarks (Version 0.0.1)
2018
tracerer : Tracer from R (Version 2.2.3)
2018
treeDA : Tree-Based Discriminant Analysis (Version 0.0.5)
2017
treediff : Testing Differences Between Families of Trees (Version 0.2.1)
2023
treespace : Statistical Exploration of Landscapes of Phylogenetic Trees (Version 1.1.4.3)
2017
tsentiment : Fetching Tweet Data for Sentiment Analysis (Version 1.0.5)
2021
tsiR : An Implementation of the TSIR Model (Version 0.4.3)
2017
tstools : A Time Series Toolbox for Official Statistics (Version 0.4.3)
2018
tukeytrend : Tukeys Trend Test via Multiple Marginal Models (Version 0.7)
2017
tvm : Time Value of Money Functions (Version 0.5.2)
2014
updog : Flexible Genotyping for Polyploids (Version 2.1.5)
2018
vcfR : Manipulate and Visualize VCF Data (Version 1.15.0)
2016
veccompare : Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output (Version 0.1.0)
2017
viewpoly : A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species (Version 0.4.1)
2021
visa : Vegetation Imaging Spectroscopy Analyzer (Version 0.1.0)
2021
viscomp : Visualize Multi-Component Interventions in Network Meta-Analysis (Version 1.0.0)
2023
vivainsights : Analyze and Visualize Data from 'Microsoft Viva Insights' (Version 0.5.5)
2022
vkR : Access to VK API via R (Version 0.2)
2016
wTO : Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network (Version 2.1)
2017
warpMix : Mixed Effects Modeling with Warping for Functional Data Using B-Spline (Version 0.1.0)
2017
weaana : Analysis the Weather Data (Version 0.1.1)
2021
webSDM : Including Known Interactions in Species Distribution Models (Version 1.1-5)
2022
welo : Weighted and Standard Elo Rates (Version 0.1.4)
2021
wevid : Quantifying Performance of a Binary Classifier Through Weight of Evidence (Version 0.6.2)
2018
widyr : Widen, Process, then Re-Tidy Data (Version 0.1.5)
2017
wpa : Tools for Analysing and Visualising Viva Insights Data (Version 1.9.1)
2021
wppExplorer : Explorer of World Population Prospects (Version 2.3-4)
2013
wql : Exploring Water Quality Monitoring Data (Version 1.0.1)
2017
wxgenR : A Stochastic Weather Generator with Seasonality (Version 1.4.2)
2023
xsp : The Chi-Square Periodogram (Version 0.1.2)
2017
xxIRT : Item Response Theory and Computer-Based Testing in R (Version 2.1.2)
2016
yorkr : Analyze Cricket Performances Based on Data from Cricsheet (Version 0.0.42)
2016
zebu : Local Association Measures (Version 0.2.2.0)
2016
Showing 1-886 of 886
RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN).
Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.
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