R Package Scholar
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survival: Survival Analysis

Terry M Therneau  Thomas Lumley  R maintainer until  Atkinson Elizabeth  Crowson Cynthia   View description and downloadsView dependenciesGitHub project

2001 Published
3.7-0 Version
0 Citations
5 Authors
Referenced by ⇅ Year
BlanketStatsments: Build and Compare Statistical Models (Version 0.1.2)

2021
cgrcusum: Continuous Time Generalized Rapid Response CUSUM (Version 0.1.0)

2021
concreg: Concordance Regression (Version 0.7)

2011
coxphMIC: Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion (Version 0.1.0)

2017
CTP: Closed Testing Procedure (CTP) (Version 3.0.1)

2020
dnet: Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology (Version 1.1.7)

2014
DTR: Estimation and Comparison of Dynamic Treatment Regimes (Version 1.7)

2013
dynamichazard: Dynamic Hazard Models using State Space Models (Version 1.0.2)

2016
fastlogranktest: A Fast Way to Calculate the p-Value of One or Multiple Log-Rank-Tests (Version 0.2.1)

2019
ggDCA: Calculate and Plot Decision Curve (Version 1.1)

2020
goldilocks: Goldilocks Adaptive Trial Designs for Time-to-Event Endpoints (Version 0.3.0)

2021
hoa: Higher Order Likelihood Inference (Version 2.1.4.1)

2005
HydeNet: Hybrid Bayesian Networks Using R and JAGS (Version 0.10.11)

2015
idmTPreg: Regression Model for Progressive Illness Death Data (Version 1.1)

2017
imputeYn: Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares (Version 1.3)

2012
JointModel: Semiparametric Joint Models for Longitudinal and Counting Processes (Version 1.0)

2016
metaRMST: Meta-Analysis of RMSTD (Version 1.0.0)

2018
mistat: Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti (Version 2.0.4)

2013
MPLikelihoodWB: Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters (Version 1.1)

2016
mudens: Density Estimate (Version 1.3.2)

2018
pcoxtime: Penalized Cox Proportional Hazard Model for Time-Dependent Covariates (Version 1.0.4)

2021
psrwe: PS-Integrated Methods for Incorporating RWE in Clinical Studies (Version 3.1)

2020
RcmdrPlugin.coin: Rcmdr Coin Plug-in (Version 1.0-23)

2012
smog: Structural Modeling by using Overlapped Group Penalty (Version 2.1.0)

2019
sptm: SemiParametric Transformation Model Methods (Version 2019.11-25)

2014
SubgrPlots: Graphical Displays for Subgroup Analysis in Clinical Trials (Version 0.1.3)

2018
subtee: Subgroup Treatment Effect Estimation in Clinical Trials (Version 1.0.1)

2018
SurvivalPath: Construction and Visualization of Survival Path Tree using Time-Series Survival Data (Version 1.3.2)

2022
survJamda: Survival Prediction by Joint Analysis of Microarray Gene Expression Data (Version 1.1.4)

2010
survtmle: Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings (Version 1.1.1)

2017
vdra: Vertical Distributed Regression Analysis (Version 1.0.0)

2021
vennLasso: Variable Selection for Heterogeneous Populations (Version 0.1.6)

2017
WPC: Weighted Predictiveness Curve (Version 1.0)

2016
GNGTools: Tools for Go/No-Go Decision-Making Framework (Version 1.0.0)

2022
concrete: Continuous-Time Competing Risks Estimation using Targeted Minimum Loss-Based Estimation (TMLE) (Version 1.0.5)

2023
gbm3: Generalized Boosted Regression Models (Version 3.0)

2024
expertsurv: Incorporate Expert Opinion with Parametric Survival Models (Version 1.3.0)

2023
VAJointSurv: Variational Approximation for Joint Survival and Marker Models (Version 0.1.0)

2022
netcox: Structural Learning in Cox Models with Time-Dependent Covariates (Version 1.0.1)

2023
packDAMipd: Decision Analysis Modelling Package with Parameters Estimation Ability from Individual Patient Level Data (Version 1.1.0)

2020
survival666: Eliminate the Influence of Co-Expression Genes on Target Genes (Version 0.5)

2021
TwoPhaseInd: Estimate Gene-Treatment Interaction Exploiting Randomization (Version 1.1.2)

2011
msmtools: Building Augmented Data to Run Multi-State Models with 'msm' Package (Version 2.0.1)

2016
epoc: Endogenous Perturbation Analysis of Cancer (Version 0.2.6-1.1)

2011
tranSurv: Transformation Model Based Estimation of Survival and Regression Under Dependent Truncation and Independent Censoring (Version 1.2.2)

2016
icrf: Interval Censored Recursive Forests (Version 2.0.2)

2020
MXM: Feature Selection (Including Multiple Solutions) and Bayesian Networks (Version 1.5.5)

2014
merlin: Mixed Effects Regression for Linear, Non-Linear and User-Defined Models (Version 0.1.0)

2018
bossR: Biomarker Optimal Segmentation System (Version 1.0.4)

2024
bpcp: Beta Product Confidence Procedure for Right Censored Data (Version 1.4.2)

2012
brea: Bayesian Recurrent Events Analysis (Version 0.3.1)

2016
broom.helpers: Helpers for Model Coefficients Tibbles (Version 1.17.0)

2020
broom: Convert Statistical Objects into Tidy Tibbles (Version 1.0.7)

2014
bshazard: Nonparametric Smoothing of the Hazard Function (Version 1.2)

2014
bujar: Buckley-James Regression for Survival Data with High-Dimensional Covariates (Version 0.2-11)

2014
burgle: 'Burgle': Stealing the Necessary Parts of Model Objects (Version 0.1.2)

2024
butcher: Model Butcher (Version 0.3.4)

2019
c060: Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models (Version 0.3-0)

2013
calibmsm: Calibration Plots for the Transition Probabilities from Multistate Models (Version 1.1.1)

2023
flexmix: Flexible Mixture Modeling (Version 2.3-19)

2003
flexrsurv: Flexible Relative Survival Analysis (Version 2.0.18)

2016
maicplus: Matching Adjusted Indirect Comparison (Version 0.1.1)

2024
msaenet: Multi-Step Adaptive Estimation Methods for Sparse Regressions (Version 3.1.2)

2016
msm: Multi-State Markov and Hidden Markov Models in Continuous Time (Version 1.8.2)

2002
mstate: Data Preparation, Estimation and Prediction in Multi-State Models (Version 0.3.3)

2009
nftbart: Nonparametric Failure Time Bayesian Additive Regression Trees (Version 2.1)

2021
nlive: Automated Estimation of Sigmoidal and Piecewise Linear Mixed Models (Version 0.6.0)

2022
nlreg: Higher Order Inference for Nonlinear Heteroscedastic Models (Version 1.2-2.2)

2009
nltm: Non-Linear Transformation Models (Version 1.4.5)

2006
nncc: Nearest Neighbors Matching of Case-Control Data (Version 2.0.0)

2022
nnt: The Number Needed to Treat (NNT) for Survival Endpoint (Version 0.1.4)

2020
nparsurv: Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data (Version 0.1.0)

2017
nph: Planning and Analysing Survival Studies under Non-Proportional Hazards (Version 2.1)

2019
nphPower: Sample Size Calculation under Non-Proportional Hazards (Version 1.1.0)

2021
nphRCT: Non-Proportional Hazards in Randomized Controlled Trials (Version 0.1.1)

2022
npsm: Nonparametric Statistical Methods (Version 2.0.0)

2014
nricens: NRI for Risk Prediction Models with Time to Event and Binary Response Data (Version 1.6)

2012
nsROC: Non-Standard ROC Curve Analysis (Version 1.1)

2017
numKM: Create a Kaplan-Meier Plot with Numbers at Risk (Version 0.2.0)

2017
ABSurvTDC: Survival Analysis using Time Dependent Covariate for Animal Breeding (Version 0.1.0)

2023
AER: Applied Econometrics with R (Version 1.2-14)

2008
AF: Model-Based Estimation of Confounder-Adjusted Attributable Fractions (Version 0.1.5)

2015
AICcmodavg: Model Selection and Multimodel Inference Based on (Q)AIC(c) (Version 2.3-3)

2009
APtools: Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times (Version 6.8.8)

2016
ARTool: Aligned Rank Transform (Version 0.11.1)

2014
ActFrag: Activity Fragmentation Metrics Extracted from Minute Level Activity Data (Version 0.1.1)

2019
AdverseEvents: 'shiny' Application for Adverse Event Analysis of 'OnCore' Data (Version 0.0.4)

2024
AutoScore: An Interpretable Machine Learning-Based Automatic Clinical Score Generator (Version 1.0.0)

2021
BART: Bayesian Additive Regression Trees (Version 2.9.9)

2017
BB: Solving and Optimizing Large-Scale Nonlinear Systems (Version 2019.10-1)

2008
BCClong: Bayesian Consensus Clustering for Multiple Longitudinal Features (Version 1.0.3)

2023
BEAMR: Bootstrap Evaluation of Association Matrices (Version 1.1.0)

2024
BFpack: Flexible Bayes Factor Testing of Scientific Expectations (Version 1.4.0)

2019
BGPhazard: Markov Beta and Gamma Processes for Modeling Hazard Rates (Version 2.1.1)

2013
BMA: Bayesian Model Averaging (Version 3.18.19)

2005
BNPdensity: Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures (Version 2023.3.8)

2011
BRACE: Bias Reduction Through Analysis of Competing Events (BRACE) (Version 0.1.0)

2023
BSGW: Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression (Version 0.9.4)

2014
Ball: Statistical Inference and Sure Independence Screening via Ball Statistics (Version 1.3.13)

2018
BayesCTDesign: Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data (Version 0.6.1)

2018
BayesFBHborrow: Bayesian Dynamic Borrowing with Flexible Baseline Hazard Function (Version 2.0.2)

2024
BayesGP: Efficient Implementation of Gaussian Process in Bayesian Hierarchical Models (Version 0.1.3)

2024
BayesMixSurv: Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification (Version 0.9.1)

2014
BayesSurvival: Bayesian Survival Analysis for Right Censored Data (Version 0.2.0)

2020
BayesSurvive: Bayesian Survival Models for High-Dimensional Data (Version 0.0.2)

2024
BayesianMediationA: Bayesian Mediation Analysis (Version 1.0.1)

2022
BeQut: Bayesian Estimation for Quantile Regression Mixed Models (Version 0.1.0)

2023
BeSS: Best Subset Selection in Linear, Logistic and CoxPH Models (Version 2.0.4)

2017
BioPETsurv: Biomarker Prognostic Enrichment Tool for Time-to-Event Trial (Version 0.1.0)

2020
BioPred: An R Package for Biomarkers Analysis in Precision Medicine (Version 1.0.2)

2024
BivRec: Bivariate Alternating Recurrent Event Data Analysis (Version 1.2.1)

2018
Boruta: Wrapper Algorithm for All Relevant Feature Selection (Version 8.0.0)

2009
BrokenAdaptiveRidge: Broken Adaptive Ridge Regression with Cyclops (Version 1.0.0)

2023
BuyseTest: Generalized Pairwise Comparisons (Version 3.0.5)

2016
CADF: Customer Analytics Data Formatting (Version 0.1)

2024
CALIBERrfimpute: Multiple Imputation Using MICE and Random Forest (Version 1.0-7)

2013
CFC: Cause-Specific Framework for Competing-Risk Analysis (Version 1.2.0)

2015
CFO: CFO-Type Designs in Phase I/II Clinical Trials (Version 2.2.0)

2024
CIEE: Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations (Version 0.1.1)

2017
CIMPLE: Analysis of Longitudinal Electronic Health Record (EHR) Data with Possibly Informative Observational Time (Version 0.1.0)

2024
CP: Conditional Power Calculations (Version 1.8)

2014
CPE: Concordance Probability Estimates in Survival Analysis (Version 1.6.3)

2008
CPsurv: Nonparametric Change Point Estimation for Survival Data (Version 1.0.0)

2017
CSCNet: Fitting and Tuning Regularized Cause-Specific Cox Models with Elastic-Net Penalty (Version 0.1.2)

2022
CSTE: Covariate Specific Treatment Effect (CSTE) Curve (Version 3.0.0)

2021
CTNote: CTN Outcomes, Treatments, and Endpoints (Version 0.1.0)

2022
CalibrationCurves: Calibration Performance (Version 2.0.3)

2022
Cascade: Selection, Reverse-Engineering and Prediction in Cascade Networks (Version 2.1)

2019
CaseBasedReasoning: Case Based Reasoning (Version 0.3)

2018
CaseCohortCoxSurvival: Case-Cohort Cox Survival Inference (Version 0.0.36)

2023
CatPredi: Optimal Categorisation of Continuous Variables in Prediction Models (Version 1.3)

2017
CauchyCP: Powerful Test for Survival Data under Non-Proportional Hazards (Version 0.1.1)

2021
CeRNASeek: Identification and Analysis of ceRNA Regulation (Version 2.1.3)

2019
CenBAR: Broken Adaptive Ridge AFT Model with Censored Data (Version 0.1.1)

2020
CoRpower: Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials (Version 1.0.4)

2018
CohortSurvival: Estimate Survival from Common Data Model Cohorts (Version 0.6.1)

2023
Colossus: "Risk Model Regression and Analysis with Complex Non-Linear Models" (Version 1.1.4.2)

2023
ComparisonSurv: Comparison of Survival Curves Between Two Groups (Version 1.1.1)

2019
CondiS: Censored Data Imputation for Direct Modeling (Version 0.1.2)

2022
Copula.Markov.survival: Copula Markov Model with Dependent Censoring (Version 1.0.0)

2019
CopulaCenR: Copula-Based Regression Models for Multivariate Censored Data (Version 1.2.4)

2019
Counterfactual: Estimation and Inference Methods for Counterfactual Analysis (Version 1.2)

2016
CoxAIPW: Doubly Robust Inference for Cox Marginal Structural Model with Informative Censoring (Version 0.0.3)

2023
CoxBcv: Bias-Corrected Sandwich Variance Estimators for Marginal Cox Analysis of Cluster Randomized Trials (Version 0.0.1.0)

2022
CoxR2: R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model (Version 1.0)

2020
Coxmos: Cox MultiBlock Survival (Version 1.0.2)

2024
CsChange: Testing for Change in C-Statistic (Version 0.1.7)

2017
CureAuxSP: Mixture Cure Models with Auxiliary Subgroup Survival Probabilities (Version 0.0.1)

2024
CureDepCens: Dependent Censoring Regression Models with Cure Fraction (Version 0.1.0)

2023
CutpointsOEHR: Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model (Version 0.1.2)

2018
Cyclops: Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis (Version 3.5.0)

2016
DAAG: Data Analysis and Graphics Data and Functions (Version 1.25.6)

2003
DCEmgmt: DCE Data Reshaping and Processing (Version 0.0.1)

2021
DCEtool: Efficient and Accessible Discrete Choice Experiments (Version 1.1.0)

2021
DOVE: Durability of Vaccine Efficacy (Version 1.10)

2021
DTAT: Dose Titration Algorithm Tuning (Version 0.3-7)

2019
DWreg: Parametric Regression for Discrete Response (Version 2.0)

2015
DanielBiostatistics10th: Functions for Wayne W. Daniel's Biostatistics, Tenth Edition (Version 0.2.6)

2022
DepCens: Dependent Censoring Regression Models (Version 0.2.3)

2022
DynForest: Random Forest with Multivariate Longitudinal Predictors (Version 1.2.0)

2022
DynNom: Visualising Statistical Models using Dynamic Nomograms (Version 5.1)

2014
EGRET: Exploration and Graphics for RivEr Trends (Version 3.0.10)

2014
EL2Surv: Empirical Likelihood (EL) for Comparing Two Survival Functions (Version 1.1)

2017
ELYP: Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model (Version 0.7-5)

2015
EQUALSTATS: Algorithm Driven Statistical Analysis for Researchers without Coding Skills (Version 0.5.0)

2024
EmpiricalCalibration: Routines for Performing Empirical Calibration of Observational Study Estimates (Version 3.1.3)

2016
Epi: Statistical Analysis in Epidemiology (Version 2.58)

2005
EpiForsk: Code Sharing at the Department of Epidemiological Research at Statens Serum Institut (Version 0.1.1)

2023
EquiSurv: Modeling, Confidence Intervals and Equivalence of Survival Curves (Version 0.1.0)

2020
EstimationTools: Maximum Likelihood Estimation for Probability Functions from Data Sets (Version 4.0.0)

2019
EventPredInCure: Event Prediction Including Cured Population (Version 1.0)

2024
EvidenceSynthesis: Synthesizing Causal Evidence in a Distributed Research Network (Version 0.5.0)

2020
FHtest: Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class (Version 1.5.1)

2012
FLORAL: Fit Log-Ratio Lasso Regression for Compositional Data (Version 0.3.0)

2023
FRESA.CAD: Feature Selection Algorithms for Computer Aided Diagnosis (Version 3.4.8)

2014
FamEvent: Family Age-at-Onset Data Simulation and Penetrance Estimation (Version 3.2)

2016
FastJM: Semi-Parametric Joint Modeling of Longitudinal and Survival Data (Version 1.4.2)

2022
FastKM: A Fast Multiple-Kernel Method Based on a Low-Rank Approximation (Version 1.1)

2015
FlexVarJM: Estimate Joint Models with Subject-Specific Variance (Version 0.1.0)

2023
GAGAs: Global Adaptive Generative Adjustment Algorithm for Generalized Linear Models (Version 0.6.2)

2022
GEInter: Robust Gene-Environment Interaction Analysis (Version 0.3.2)

2021
GFDsurv: Tests for Survival Data in General Factorial Designs (Version 0.1.1)

2021
GGally: Extension to 'ggplot2' (Version 2.2.1)

2010
GJRM: Generalised Joint Regression Modelling (Version 0.2-6.7)

2017
GORCure: Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data (Version 2.0)

2016
GPSCDF: Generalized Propensity Score Cumulative Distribution Function (Version 0.1.1)

2019
GRIN2: Genomic Random Interval (GRIN) (Version 1.0)

2024
GSED: Group Sequential Enrichment Design (Version 2.6)

2016
GSSTDA: Progression Analysis of Disease with Survival using Topological Data Analysis (Version 1.0.0)

2023
GTDL: The Generalized Time-Dependent Logistic Family (Version 1.0.0)

2022
GWASinlps: Non-Local Prior Based Iterative Variable Selection Tool for Genome-Wide Association Studies (Version 2.3)

2017
GenEst: Generalized Mortality Estimator (Version 1.4.9)

2018
GofCens: Goodness-of-Fit Methods for Complete and Right-Censored Data (Version 1.2.1)

2021
Greg: Regression Helper Functions (Version 2.0.2)

2016
HCTDesign: Group Sequential Design for Historical Control Trial with Survival Outcome (Version 0.7.2)

2022
HCmodelSets: Regression with a Large Number of Potential Explanatory Variables (Version 1.1.3)

2018
HDJM: Penalized High-Dimensional Joint Model (Version 0.1.0)

2023
HIMA: High-Dimensional Mediation Analysis (Version 2.3.0)

2017
HQM: Superefficient Estimation of Future Conditional Hazards Based on Marker Information (Version 0.1.4)

2022
HSAUR: A Handbook of Statistical Analyses Using R (1st Edition) (Version 1.3-10)

2006
HSAUR3: A Handbook of Statistical Analyses Using R (3rd Edition) (Version 1.0-15)

2014
HSAUR2: A Handbook of Statistical Analyses Using R (2nd Edition) (Version 1.1-20)

2009
HazardDiff: Conditional Treatment Effect for Competing Risks (Version 0.1.0)

2021
Hmisc: Harrell Miscellaneous (Version 5.2-1)

2003
ICGOR: Fit Generalized Odds Rate Hazards Model with Interval Censored Data (Version 2.0)

2016
ICSKAT: Interval-Censored Sequence Kernel Association Test (Version 0.2.0)

2021
ICcalib: Cox Model with Interval-Censored Starting Time of a Covariate (Version 1.0.8)

2018
ICcforest: An Ensemble Method for Interval-Censored Survival Data (Version 0.5.1)

2019
IDMIR: Identification of Dysregulated MiRNAs Based on MiRNA-MiRNA Interaction Network (Version 0.1.0)

2023
IDPSurvival: Imprecise Dirichlet Process for Survival Analysis (Version 1.2)

2014
INLAjoint: Multivariate Joint Modeling for Longitudinal and Time-to-Event Outcomes with 'INLA' (Version 24.3.25)

2023
IPCWK: Kendall's Tau Partial Corr. for Survival Trait and Biomarkers (Version 1.0)

2020
IPDfromKM: Map Digitized Survival Curves Back to Individual Patient Data (Version 0.1.10)

2020
ISwR: Introductory Statistics with R (Version 2.0-9)

2002
InferenceSMR: Inference About the Standardized Mortality Ratio when Evaluating the Effect of a Screening Program on Survival (Version 1.0.2)

2013
InformativeCensoring: Multiple Imputation for Informative Censoring (Version 0.3.6)

2016
IrregLong: Analysis of Longitudinal Data with Irregular Observation Times (Version 0.4.0)

2019
JLPM: Joint Latent Process Models (Version 1.0.2)

2022
JM: Joint Modeling of Longitudinal and Survival Data (Version 1.5-2)

2008
JMH: Joint Model of Heterogeneous Repeated Measures and Survival Data (Version 1.0.3)

2023
JMbayes: Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach (Version 0.8-85)

2012
JMbayes2: Extended Joint Models for Longitudinal and Time-to-Event Data (Version 0.5-0)

2021
JSM: Semiparametric Joint Modeling of Survival and Longitudinal Data (Version 1.0.1)

2016
JointAI: Joint Analysis and Imputation of Incomplete Data (Version 1.0.6)

2018
JointFPM: A Parametric Model for Estimating the Mean Number of Events (Version 1.2.1)

2023
KMunicate: KMunicate-Style Kaplan–Meier Plots (Version 0.2.5)

2020
KONPsurv: KONP Tests: Powerful K-Sample Tests for Right-Censored Data (Version 1.0.4)

2019
LDM: Testing Hypotheses About the Microbiome using the Linear Decomposition Model (Version 6.0.1)

2023
LTRCtrees: Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data (Version 1.1.1)

2016
LTRCforests: Ensemble Methods for Survival Data with Time-Varying Covariates (Version 0.7.0)

2020
Landmarking: Analysis using Landmark Models (Version 1.0.0)

2022
LogicReg: Logic Regression (Version 1.6.6)

2005
LongCART: Recursive Partitioning for Longitudinal Data and Right Censored Data Using Baseline Covariates (Version 3.2)

2019
MAGNAMWAR: A Pipeline for Meta-Genome Wide Association (Version 2.0.4)

2017
MAICtools: Performing Matched-Adjusted Indirect Comparisons (MAIC) (Version 0.1.1)

2024
MASS: Support Functions and Datasets for Venables and Ripley's MASS (Version 7.3-61)

2009
MCPModBC: Improved Inference in Multiple Comparison Procedure – Modelling (Version 1.1)

2023
MCPModGeneral: A Supplement to the 'DoseFinding' Package for the General Case (Version 0.1-3)

2019
MFSIS: Model-Free Sure Independent Screening Procedures (Version 0.2.1)

2021
MMAD: MM Algorithm Based on the Assembly-Decomposition Technology (Version 1.0.0)

2023
MST: Multivariate Survival Trees (Version 2.2)

2014
MTLR: Survival Prediction with Multi-Task Logistic Regression (Version 0.2.1)

2018
MachineShop: Machine Learning Models and Tools (Version 3.8.0)

2018
MapGAM: Mapping Smoothed Effect Estimates from Individual-Level Data (Version 1.3)

2012
MatchIt: Nonparametric Preprocessing for Parametric Causal Inference (Version 4.6.0)

2005
Mediana: Clinical Trial Simulations (Version 1.0.8)

2015
MetabolicSurv: A Biomarker Validation Approach for Classification and Predicting Survival Using Metabolomics Signature (Version 1.1.2)

2019
MiMIR: Metabolomics-Based Models for Imputing Risk (Version 1.5)

2022
MiRKAT: Microbiome Regression-Based Kernel Association Tests (Version 1.2.3)

2017
MicrobiomeSurv: Biomarker Validation for Microbiome-Based Survival Classification and Prediction (Version 0.1.0)

2023
ModTools: Building Regression and Classification Models (Version 0.9.13)

2021
MonotoneHazardRatio: Nonparametric Estimation and Inference of a Monotone Hazard Ratio Function (Version 0.2.0)

2023
MuMIn: Multi-Model Inference (Version 1.48.4)

2010
My.stepwise: Stepwise Variable Selection Procedures for Regression Analysis (Version 0.1.0)

2017
NADA: Nondetects and Data Analysis for Environmental Data (Version 1.6-1.1)

2004
NADA2: Data Analysis for Censored Environmental Data (Version 1.1.8)

2021
NNMIS: Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates (Version 1.0.1)

2017
NPHMC: Sample Size Calculation for the Proportional Hazards Mixture Cure Model (Version 2.3)

2012
NPHazardRate: Nonparametric Hazard Rate Estimation (Version 0.1)

2018
NSM3: Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition (Version 1.19)

2013
ODS: Statistical Methods for Outcome-Dependent Sampling Designs (Version 0.2.0)

2018
OSTE: Optimal Survival Trees Ensemble (Version 1.0)

2021
OTRselect: Variable Selection for Optimal Treatment Decision (Version 1.2)

2016
Oncofilterfast: Aids in the Analysis of Genes Influencing Cancer Survival (Version 1.0.0)

2024
OneArm2stage: Phase II Single-Arm Two-Stage Designs with Time-to-Event Outcomes (Version 1.2.1)

2022
OneArmTTE: One-Arm Clinical Trial Designs for Time-to-Event Endpoint (Version 1.0)

2022
OneSampleLogRankTest: One-Sample Log-Rank Test (Version 0.9.2)

2024
OptimalTiming: Optimal Timing Identification (Version 0.1.0)

2017
OrdFacReg: Least Squares, Logistic, and Cox-Regression with Ordered Predictors (Version 1.0.6)

2009
PAmeasures: Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data (Version 0.1.0)

2018
PBIR: Estimating the Probability of Being in Response and Related Outcomes (Version 0.1-0)

2020
PCLassoReg: Group Regression Models for Risk Protein Complex Identification (Version 1.0.0)

2021
PDN: Personalized Disease Network (Version 0.1.0)

2017
PDXpower: Time to Event Outcome in Experimental Designs of Pre-Clinical Studies (Version 1.0.3)

2024
PHInfiniteEstimates: Tools for Inference in the Presence of a Monotone Likelihood (Version 2.9.5)

2020
PHeval: Evaluation of the Proportional Hazards Assumption and Test for Comparing Survival Curves with a Standardized Score Process (Version 1.1)

2014
PICBayes: Bayesian Models for Partly Interval-Censored Data (Version 1.0)

2021
PINSPlus: Clustering Algorithm for Data Integration and Disease Subtyping (Version 2.0.7)

2018
PJFM: Variational Inference for High-Dimensional Joint Frailty Model (Version 0.1.0)

2024
PMAPscore: Identify Prognosis-Related Pathways Altered by Somatic Mutation (Version 0.1.1)

2022
PRIMEplus: Study Design for Immunotherapy Clinical Trials (Version 1.0.16)

2024
PResiduals: Probability-Scale Residuals and Residual Correlations (Version 1.0-1)

2013
PScr: Estimation for the Power Series Cure Rate Model (Version 1.1)

2022
PTE: Personalized Treatment Evaluator (Version 1.7)

2014
PTERP: PTE and RP for Optimally-Transformed Surrogate (Version 1.0)

2022
PWEALL: Design and Monitoring of Survival Trials Accounting for Complex Situations (Version 1.3.0.1)

2016
PWEXP: Piecewise Exponential Distribution Prediction Model (Version 0.5.0)

2023
PenCoxFrail: Regularization in Cox Frailty Models (Version 2.0.0)

2016
Phase123: Simulating and Conducting Phase 123 Trials (Version 2.1)

2018
PlackettLuce: Plackett-Luce Models for Rankings (Version 0.4.3)

2017
ProSGPV: Penalized Regression with Second-Generation P-Values (Version 1.0.0)

2021
ProgModule: Identification of Prognosis-Related Mutually Exclusive Modules (Version 0.1.0)

2024
Publish: Format Output of Various Routines in a Suitable Way for Reports and Publication (Version 2023.01.17)

2017
PwrGSD: Power in a Group Sequential Design (Version 2.3.8)

2008
QTOCen: Quantile-Optimal Treatment Regimes with Censored Data (Version 0.1.1)

2019
Qest: Quantile-Based Estimator (Version 1.0.1)

2022
Qindex: Continuous and Dichotomized Index Predictors Based on Distribution Quantiles (Version 0.1.7)

2022
QoLMiss: Scales Score Calculation from Quality of Life Data (Version 0.1.0)

2022
R2Addhaz: R2 Measure of Explained Variation under the Additive Hazards Model (Version 0.1.0)

2020
R2HTML: HTML Exportation for R Objects (Version 2.3.4)

2001
R4HCR: R for Health Care Research (Version 0.1)

2024
RABR: Simulations for Response Adaptive Block Randomization Design (Version 0.1.1)

2021
RESI: Robust Effect Size Index (RESI) Estimation (Version 1.2.4)

2022
RISCA: Causal Inference and Prediction in Cohort-Based Analyses (Version 1.0.5)

2019
RItools: Randomization Inference Tools (Version 0.3-4)

2008
RLT: Reinforcement Learning Trees (Version 3.2.6)

2017
ROlogit: Fit Rank-Ordered Logit (RO-Logit) Model (Version 0.1.2)

2018
RVAideMemoire: Testing and Plotting Procedures for Biostatistics (Version 0.9-83-7)

2011
RcmdrPlugin.BWS1: R Commander Plug-in for Case 1 Best-Worst Scaling (Version 0.2-2)

2020
RcmdrPlugin.BWS3: R Commander Plug-in for Case 3 Best-Worst Scaling (Version 0.2-3)

2023
RcmdrPlugin.BWS2: R Commander Plug-in for Case 2 Best-Worst Scaling (Version 0.2-2)

2022
RcmdrPlugin.DCE: R Commander Plug-in for Discrete Choice Experiments (Version 0.2-3)

2021
RcmdrPlugin.KMggplot2: R Commander Plug-in for Data Visualization with 'ggplot2' (Version 0.2-6)

2012
RcmdrPlugin.survival: R Commander Plug-in for the 'survival' Package (Version 1.3-2)

2009
ReIns: Functions from "Reinsurance: Actuarial and Statistical Aspects" (Version 1.0.15)

2016
ReSurv: Machine Learning Models for Predicting Claim Counts (Version 1.0.0)

2024
RegrCoeffsExplorer: Efficient Visualization of Regression Coefficients for lm(), glm(), and glmnet() Objects (Version 1.1.0)

2024
RelDists: Estimation for some Reliability Distributions (Version 1.0.0)

2022
RoBSA: Robust Bayesian Survival Analysis (Version 1.0.2)

2022
RobinCar: Robust Inference for Covariate Adjustment in Randomized Clinical Trials (Version 0.3.2)

2024
RobustAFT: Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case (Version 1.4-7)

2011
Rsurrogate: Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information (Version 3.2)

2015
SAME: Seamless Adaptive Multi-Arm Multi-Stage Enrichment (Version 0.1.0)

2023
SCCS: The Self-Controlled Case Series Method (Version 1.7)

2018
SCORNET: Semi-Supervised Calibration of Risk with Noisy Event Times (Version 0.1.1)

2020
SEERaBomb: SEER and Atomic Bomb Survivor Data Analysis Tools (Version 2019.2)

2012
SHELF: Tools to Support the Sheffield Elicitation Framework (Version 1.11.0)

2015
SIDES: Subgroup Identification Based on Differential Effect Search (Version 1.18)

2016
SIGN: Similarity Identification in Gene Expression (Version 0.1.0)

2018
SIMMS: Subnetwork Integration for Multi-Modal Signatures (Version 1.3.2)

2013
SIS: Sure Independence Screening (Version 0.8-8)

2009
SMDIC: Identification of Somatic Mutation-Driven Immune Cells (Version 0.1.6)

2020
SMPracticals: Practicals for Use with Davison (2003) Statistical Models (Version 1.4-3.1)

2006
SNPassoc: SNPs-Based Whole Genome Association Studies (Version 2.1-2)

2006
SPREDA: Statistical Package for Reliability Data Analysis (Version 1.1)

2014
SSLR: Semi-Supervised Classification, Regression and Clustering Methods (Version 0.9.3.3)

2020
SSRMST: Sample Size Calculation using Restricted Mean Survival Time (Version 0.1.1)

2015
STAND: Statistical Analysis of Non-Detects (Version 2.0)

2015
SUMMER: Small-Area-Estimation Unit/Area Models and Methods for Estimation in R (Version 1.4.0)

2017
SemiCompRisks: Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data (Version 3.4)

2013
SemiPar.depCens: Copula Based Cox Proportional Hazards Models for Dependent Censoring (Version 0.1.3)

2024
SensIAT: Sensitivity Analysis for Irregular Assessment Times (Version 0.1.1)

2024
SimHaz: Simulated Survival and Hazard Analysis for Time-Dependent Exposure (Version 0.1)

2015
SimNPH: Simulate Non-Proportional Hazards (Version 0.5.5)

2023
StepReg: Stepwise Regression Analysis (Version 1.5.6)

2017
StratifiedMedicine: Stratified Medicine (Version 1.0.5)

2019
SuRF.vs: Subsampling Ranking Forward Selection (SuRF) (Version 1.1.0.1)

2022
SubgrpID: Patient Subgroup Identification for Clinical Drug Development (Version 0.12)

2017
Sunclarco: Survival Analysis using Copulas (Version 1.0.0)

2017
Surrogate: Evaluation of Surrogate Endpoints in Clinical Trials (Version 3.3.0)

2014
SurrogateOutcome: Estimation of the Proportion of Treatment Effect Explained by Surrogate Outcome Information (Version 1.1)

2019
SurrogateTest: Early Testing for a Treatment Effect using Surrogate Marker Information (Version 1.3)

2017
SurvCorr: Correlation of Bivariate Survival Times (Version 1.1)

2015
SurvDisc: Discrete Time Survival and Longitudinal Data Analysis (Version 0.1.1)

2016
SurvEval: Methods for the Evaluation of Survival Models (Version 1.1)

2024
SurvHiDim: High Dimensional Survival Data Analysis (Version 0.1.1)

2021
SurvMA: Model Averaging Prediction of Personalized Survival Probabilities (Version 1.6.8)

2024
SurvMI: Multiple Imputation Method in Survival Analysis (Version 0.1.0)

2020
SurvMetrics: Predictive Evaluation Metrics in Survival Analysis (Version 0.5.0)

2021
SurvRegCensCov: Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate (Version 1.7)

2014
SurvTrunc: Analysis of Doubly Truncated Data (Version 0.2.0)

2018
SurvivalClusteringTree: Clustering Analysis Using Survival Tree and Forest Algorithms (Version 1.1.1)

2023
SurvivalTests: Survival Tests for One-Way Layout (Version 1.0)

2024
SvyNom: Nomograms for Right-Censored Outcomes from Survey Designs (Version 1.2)

2012
TH.data: TH's Data Archive (Version 1.1-2)

2013
TSDT: Treatment-Specific Subgroup Detection Tool (Version 1.0.7)

2018
ThomasJeffersonUniv: Handy Tools for TJU/TJUH Employees (Version 0.1.3)

2022
ThresholdROCsurvival: Diagnostic Ability Assessment with Right-Censored Data at a Fixed Time t (Version 1.2.1)

2022
TidyDensity: Functions for Tidy Analysis and Generation of Random Data (Version 1.5.0)

2022
TimeVTree: Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach (Version 0.3.1)

2018
TraMineRextras: TraMineR Extension (Version 0.6.8)

2012
TransModel: Fit Linear Transformation Models for Right Censored Data (Version 2.3)

2015
TreatmentSelection: Evaluate Treatment Selection Biomarkers (Version 2.1.1)

2014
TwoArmSurvSim: Simulate Survival Data for Randomized Clinical Trials (Version 0.2)

2020
TwoStepCLogit: Conditional Logistic Regression: A Two-Step Estimation Method (Version 1.2.5)

2011
UCSCXenaShiny: Interactive Analysis of UCSC Xena Data (Version 2.1.0)

2019
Umpire: Simulating Realistic Gene Expression and Clinical Data (Version 2.0.10)

2017
VBJM: Variational Inference for Joint Model (Version 0.1.0)

2023
VEwaning: Vaccine Efficacy Over Time (Version 1.3)

2021
VEwaningVariant: Vaccine Efficacy Over Time - Variant Aware (Version 1.4)

2021
VSOLassoBag: Variable Selection Oriented LASSO Bagging Algorithm (Version 0.99.1)

2022
VarReg: Semi-Parametric Variance Regression (Version 2.0)

2017
VirtualPop: Simulation of Populations by Sampling Waiting-Time Distributions (Version 2.0.2)

2022
WARDEN: Workflows for Health Technology Assessments in R using Discrete EveNts (Version 0.99.1)

2024
WCE: Weighted Cumulative Exposure Models (Version 1.0.3)

2015
WGCNA: Weighted Correlation Network Analysis (Version 1.73)

2010
WINS: The R WINS Package (Version 1.4.2)

2021
WLreg: Regression Analysis Based on Win Loss Endpoints (Version 1.0.0.1)

2017
WR: Win Ratio Analysis of Composite Time-to-Event Outcomes (Version 1.0)

2019
WRTDStidal: Weighted Regression for Water Quality Evaluation in Tidal Waters (Version 1.1.4)

2016
Wcompo: Semiparametric Proportional Means Regression of Weighted Composite Endpoint (Version 1.0)

2021
WeightIt: Weighting for Covariate Balance in Observational Studies (Version 1.3.2)

2017
WinRatio: Win Ratio for Prioritized Outcomes and 95% Confidence Interval (Version 1.0)

2020
YPBP: Yang and Prentice Model with Baseline Distribution Modeled by Bernstein Polynomials (Version 0.0.1)

2020
YPPE: Yang and Prentice Model with Piecewise Exponential Baseline Distribution (Version 1.0.1)

2019
YPmodelPhreg: The Short-Term and Long-Term Hazard Ratio Model with Proportional Adjustment (Version 1.0.0)

2023
addhazard: Fit Additive Hazards Models for Survival Analysis (Version 1.1.0)

2015
adjSURVCI: Parameter and Adjusted Probability Estimation for Right-Censored Data (Version 1.0)

2021
adjustedCurves: Confounder-Adjusted Survival Curves and Cumulative Incidence Functions (Version 0.11.2)

2022
aftR2: R-Squared Measure under Accelerated Failure Time (AFT) Models (Version 0.1.0)

2023
aftgee: Accelerated Failure Time Model with Generalized Estimating Equations (Version 1.2.1)

2012
afthd: Accelerated Failure Time for High Dimensional Data with MCMC (Version 1.1.0)

2021
aftsem: Semiparametric Accelerated Failure Time Model (Version 1.0)

2024
afttest: Model Diagnostics for Accelerated Failure Time Models (Version 4.3.2.3)

2022
agridat: Agricultural Datasets (Version 1.24)

2011
ahaz: Regularization for Semiparametric Additive Hazards Regression (Version 1.15.1)

2011
ahMLE: Methods for the Additive Hazard Model (Version 1.20.1)

2021
ahw: Calculates Continuous Time Likelihood Ratio Weights Assuming Multiplicative Intensity Models and Additive Hazard Models (Version 0.1.0)

2022
aisoph: Additive Isotonic Proportional Hazards Model (Version 0.4)

2022
allMT: Acute Lymphoblastic Leukemia Maintenance Therapy Analysis (Version 0.1.0)

2023
allestimates: Effect Estimates from All Models (Version 0.2.3)

2020
amt: Animal Movement Tools (Version 0.2.2.0)

2018
anoint: Analysis of Interactions (Version 1.5)

2012
aorsf: Accelerated Oblique Random Forests (Version 0.1.5)

2022
aplore3: Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013) (Version 0.9)

2014
arsenal: An Arsenal of 'R' Functions for Large-Scale Statistical Summaries (Version 3.6.3)

2016
ascii: Export R Objects to Several Markup Languages (Version 2.6)

2009
atable: Create Tables for Reporting Clinical Trials (Version 0.1.15)

2018
autoReg: Automatic Linear and Logistic Regression and Survival Analysis (Version 0.3.3)

2022
autoslider.core: Slide Automation for Tables, Listings and Figures (Version 0.1.0)

2024
bamlss: Bayesian Additive Models for Location, Scale, and Shape (and Beyond) (Version 1.2-5)

2017
base.rms: Convert Regression Between Base Function and 'rms' Package (Version 1.0)

2020
basecamb: Utilities for Streamlined Data Import, Imputation and Modelling (Version 1.1.5)

2021
bayesCT: Simulation and Analysis of Adaptive Bayesian Clinical Trials (Version 0.99.3)

2019
bayesCureRateModel: Bayesian Cure Rate Modeling for Time-to-Event Data (Version 1.3)

2024
bayesDP: Implementation of the Bayesian Discount Prior Approach for Clinical Trials (Version 1.3.6)

2017
bayesSurv: Bayesian Survival Regression with Flexible Error and Random Effects Distributions (Version 3.8)

2004
bayesplot: Plotting for Bayesian Models (Version 1.11.1)

2016
baytrends: Long Term Water Quality Trend Analysis (Version 2.0.12)

2018
bcfrailph: Semiparametric Bivariate Correlated Frailty Models Fit (Version 0.1.1)

2020
bcfrailphdv: Bivariate Correlated Frailty Models with Varied Variances (Version 0.1.1)

2020
beanz: Bayesian Analysis of Heterogeneous Treatment Effect (Version 3.1)

2016
bestridge: A Comprehensive R Package for Best Subset Selection (Version 1.0.7)

2021
bhm: Biomarker Threshold Models (Version 1.18)

2016
bigSurvSGD: Big Survival Analysis Using Stochastic Gradient Descent (Version 0.0.1)

2020
biglasso: Extending Lasso Model Fitting to Big Data (Version 1.6.0)

2016
binequality: Methods for Analyzing Binned Income Data (Version 1.0.4)

2014
biostat3: Utility Functions, Datasets and Extended Examples for Survival Analysis (Version 0.2.2)

2018
biospear: Biomarker Selection in Penalized Regression Models (Version 1.0.2)

2017
blapsr: Bayesian Inference with Laplace Approximations and P-Splines (Version 0.6.1)

2020
blockForest: Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data (Version 0.2.6)

2018
bnnSurvival: Bagged k-Nearest Neighbors Survival Prediction (Version 0.1.5)

2016
bonsaiforest: Shrinkage Based Forest Plots (Version 0.1.1)

2024
boot: Bootstrap Functions (Originally by Angelo Canty for S) (Version 1.3-31)

1999
boot.pval: Bootstrap p-Values (Version 0.5)

2021
cancerGI: Analyses of Cancer Gene Interaction (Version 1.0.1)

2016
carSurv: Correlation-Adjusted Regression Survival (CARS) Scores (Version 1.0.0)

2018
car: Companion to Applied Regression (Version 3.1-3)

2001
carcass: Estimation of the Number of Fatalities from Carcass Searches (Version 1.7)

2012
cardx: Extra Analysis Results Data Utilities (Version 0.2.2)

2024
casebase: Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression (Version 0.10.6)

2017
causalCmprsk: Nonparametric and Cox-Based Estimation of Average Treatment Effects in Competing Risks (Version 2.0.0)

2020
cchs: Cox Model for Case-Cohort Data with Stratified Subcohort-Selection (Version 0.4.5)

2015
ccostr: Estimation of Mean Costs in Censored Data (Version 0.1.0)

2019
cenROC: Estimating Time-Dependent ROC Curve and AUC for Censored Data (Version 2.0.0)

2020
censCov: Linear Regression with a Randomly Censored Covariate (Version 1.0-0)

2017
censored: 'parsnip' Engines for Survival Models (Version 0.3.2)

2022
cequre: Censored Quantile Regression & Monotonicity-Respecting Restoring (Version 1.5)

2023
cforward: Forward Selection using Concordance/C-Index (Version 0.1.0)

2021
cg: Compare Groups, Analytically and Graphically (Version 1.0-3)

2010
chest: Change-in-Estimate Approach to Assess Confounding Effects (Version 0.3.7)

2019
chngpt: Estimation and Hypothesis Testing for Threshold Regression (Version 2024.11-15)

2013
choplump: Permutation Test for Some Positive and Many Zero Responses (Version 1.1.2)

2007
ciTools: Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models (Version 0.6.1)

2017
clespr: Composite Likelihood Estimation for Spatial Data (Version 1.1.2)

2018
clinfun: Clinical Trial Design and Data Analysis Functions (Version 1.1.5)

2007
clintools: Tools for Clinical Research (Version 0.9.10.1)

2021
cloneRate: Estimate Growth Rates from Phylogenetic Trees (Version 0.2.3)

2023
clustcurv: Determining Groups in Multiples Curves (Version 2.0.2)

2019
cmprsk: Subdistribution Analysis of Competing Risks (Version 2.2-12)

2001
cmprskQR: Analysis of Competing Risks Using Quantile Regressions (Version 0.9.2)

2014
cmprskcoxmsm: Use IPW to Estimate Treatment Effect under Competing Risks (Version 0.2.1)

2021
coda4microbiome: Compositional Data Analysis for Microbiome Studies (Version 0.2.4)

2022
cohorttools: Cohort Data Analyses (Version 0.1.6)

2019
coin: Conditional Inference Procedures in a Permutation Test Framework (Version 1.4-3)

2005
comets: Covariance Measure Tests for Conditional Independence (Version 0.1-0)

2024
compareGroups: Descriptive Analysis by Groups (Version 4.9.1)

2010
compound.Cox: Univariate Feature Selection and Compound Covariate for Predicting Survival, Including Copula-Based Analyses for Dependent Censoring (Version 3.31)

2012
cond: Approximate Conditional Inference for Logistic and Loglinear Models (Version 1.2-3.1)

2009
condSURV: Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data (Version 2.0.4)

2016
confSAM: Estimates and Bounds for the False Discovery Proportion, by Permutation (Version 0.2)

2017
contTimeCausal: Continuous Time Causal Models (Version 1.1)

2021
controlTest: Quantile Comparison for Two-Sample Right-Censored Survival Data (Version 1.1.0)

2015
contsurvplot: Visualize the Effect of a Continuous Variable on a Time-to-Event Outcome (Version 0.2.1)

2022
copcor: Correlates of Protection and Correlates of Risk Functions (Version 2024.7-31)

2023
coreSim: Core Functionality for Simulating Quantities of Interest from Generalised Linear Models (Version 0.2.4)

2016
cotram: Count Transformation Models (Version 0.5-2)

2019
coxed: Duration-Based Quantities of Interest for the Cox Proportional Hazards Model (Version 0.3.3)

2018
coxme: Mixed Effects Cox Models (Version 2.2-22)

2009
coxphSGD: Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model (Version 0.2.1)

2017
coxphf: Cox Regression with Firth's Penalized Likelihood (Version 1.13.4)

2007
coxphm: Time-to-Event Data Analysis with Missing Survival Times (Version 0.1.0)

2024
coxphw: Weighted Estimation in Cox Regression (Version 4.0.3)

2008
coxrobust: Fit Robustly Proportional Hazards Regression Model (Version 1.0.1)

2006
coxrt: Cox Proportional Hazards Regression for Right-Truncated Data (Version 1.0.3)

2018
crosstable: Crosstables for Descriptive Analyses (Version 0.8.1)

2021
crrSC: Competing Risks Regression for Stratified and Clustered Data (Version 1.1.2)

2011
crrcbcv: Bias-Corrected Variance for Competing Risks Regression with Clustered Data (Version 1.0)

2021
csampling: Functions for Conditional Simulation in Regression-Scale Models (Version 1.2-2.1)

2009
csmpv: Biomarker Confirmation, Selection, Modelling, Prediction, and Validation (Version 1.0.3)

2024
ctqr: Censored and Truncated Quantile Regression (Version 2.1)

2016
cuRe: Parametric Cure Model Estimation (Version 1.1.1)

2020
curephEM: NPMLE for Logistic-Cox Cure-Rate Model (Version 0.3.0)

2020
curesurv: Mixture and Non Mixture Parametric Cure Models to Estimate Cure Indicators (Version 0.1.1)

2024
currentSurvival: Estimation of CCI and CLFS Functions (Version 1.1)

2013
cutoff: Seek the Significant Cutoff Value (Version 1.3)

2019
cvwrapr: Tools for Cross Validation (Version 1.0)

2021
cyclomort: Survival Modeling with a Periodic Hazard Function (Version 1.0.2)

2020
dawai: Discriminant Analysis with Additional Information (Version 1.2.7)

2014
dcurves: Decision Curve Analysis for Model Evaluation (Version 0.5.0)

2021
debest: Duration Estimation for Biomarker Enrichment Studies and Trials (Version 0.1.0)

2024
deeptrafo: Fitting Deep Conditional Transformation Models (Version 1.0-0)

2022
denstrip: Density Strips and Other Methods for Compactly Illustrating Distributions (Version 1.5.4)

2008
depCensoring: Statistical Methods for Survival Data with Dependent Censoring (Version 0.1.5)

2024
depigner: A Utility Package to Help you Deal with "Pignas" (Version 0.9.1)

2020
desctable: Produce Descriptive and Comparative Tables Easily (Version 0.3.0)

2017
dipm: Depth Importance in Precision Medicine (DIPM) Method (Version 1.9)

2021
dirttee: Distributional Regression for Time to Event Data (Version 1.0.2)

2022
discfrail: Cox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties (Version 0.1)

2019
discSurv: Discrete Time Survival Analysis (Version 2.0.0)

2015
distcomp: Computations over Distributed Data without Aggregation (Version 1.3-3)

2015
diversityForest: Innovative Complex Split Procedures in Random Forests Through Candidate Split Sampling (Version 0.5.0)

2020
dlnm: Distributed Lag Non-Linear Models (Version 2.4.7)

2009
dnn: Deep Neural Network Tools for Probability and Statistic Models (Version 0.0.6)

2024
doBy: Groupwise Statistics, LSmeans, Linear Estimates, Utilities (Version 4.6.24)

2006
dpasurv: Dynamic Path Analysis of Survival Data via Aalen's Additive Hazards Model (Version 0.1.0)

2024
drcSeedGerm: Utilities for Data Analyses in Seed Germination/Emergence Assays (Version 1.0.1)

2023
drcte: Statistical Approaches for Time-to-Event Data in Agriculture (Version 1.0.30)

2023
drgee: Doubly Robust Generalized Estimating Equations (Version 1.1.10)

2013
dropR: Dropout Analysis by Condition (Version 1.0.3)

2015
drugDemand: Drug Demand Forecasting (Version 0.1.3)

2023
dscoreMSM: Survival Proximity Score Matching in Multi-State Survival Model (Version 0.1.0)

2024
dtrSurv: Dynamic Treatment Regimes for Survival Analysis (Version 1.4)

2020
dtrackr: Track your Data Pipelines (Version 0.4.6)

2022
dynpred: Companion Package to "Dynamic Prediction in Clinical Survival Analysis" (Version 0.1.2)

2011
dynsurv: Dynamic Models for Survival Data (Version 0.4-7)

2011
ePCR: Ensemble Penalized Cox Regression for Survival Prediction (Version 0.11.0)

2017
easy.glmnet: Functions to Simplify the Use of 'glmnet' for Machine Learning (Version 1.0)

2024
easysurv: Simplify Survival Data Analysis and Model Fitting (Version 2.0.1)

2024
ebmstate: Empirical Bayes Multi-State Cox Model (Version 0.1.5)

2020
ecpc: Flexible Co-Data Learning for High-Dimensional Prediction (Version 3.1.1)

2021
edecob: Event Detection Using Confidence Bounds (Version 1.2.2)

2021
eha: Event History Analysis (Version 2.11.5)

2003
em: Generic EM Algorithm (Version 1.0.0)

2023
emmeans: Estimated Marginal Means, aka Least-Squares Means (Version 1.10.6)

2017
ems: Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units (Version 1.3.11)

2017
eoa3: Wildlife Mortality Estimator for Low Fatality Rates and Imperfect Detection (Version 1.0.0.2)

2023
epade: Easy Plots (Version 0.5.1)

2011
epiDisplay: Epidemiological Data Display Package (Version 3.5.0.2)

2015
epiR: Tools for the Analysis of Epidemiological Data (Version 2.0.78)

2008
epiomics: Analysis of Omics Data in Observational Studies (Version 1.1.0)

2023
epitab: Flexible Contingency Tables for Epidemiology (Version 0.2.2)

2017
etm: Empirical Transition Matrix (Version 1.1.1)

2008
etree: Classification and Regression with Structured and Mixed-Type Data (Version 0.1.0)

2022
eventPred: Event Prediction (Version 0.2.6)

2023
eventTrack: Event Prediction for Time-to-Event Endpoints (Version 1.0.3)

2021
eventglm: Regression Models for Event History Outcomes (Version 1.2.2)

2020
exactRankTests: Exact Distributions for Rank and Permutation Tests (Version 0.8-35)

2001
extrafrail: Estimation and Additional Tools for Alternative Shared Frailty Models (Version 1.12)

2022
extremefit: Estimation of Extreme Conditional Quantiles and Probabilities (Version 1.0.2)

2016
ezcox: Easily Process a Batch of Cox Models (Version 1.0.4)

2019
factorial2x2: Design and Analysis of a 2x2 Factorial Trial (Version 0.2.0)

2019
fairml: Fair Models in Machine Learning (Version 0.8)

2020
familiar: End-to-End Automated Machine Learning and Model Evaluation (Version 1.5.0)

2022
fastAFT: Fast Regression for the Accelerated Failure Time (AFT) Model (Version 1.4)

2023
fastcmprsk: Fine-Gray Regression via Forward-Backward Scan (Version 1.24.10)

2019
fic: Focused Information Criteria for Model Comparison (Version 1.0.0)

2019
figuRes2: Support for a Variety of Figure Production Tasks (Version 1.0.0)

2022
finalfit: Quickly Create Elegant Regression Results Tables and Plots when Modelling (Version 1.0.8)

2018
fitdistrplus: Help to Fit of a Parametric Distribution to Non-Censored or Censored Data (Version 1.2-1)

2009
flexsurvcure: Flexible Parametric Cure Models (Version 1.3.1)

2017
flexsurv: Flexible Parametric Survival and Multi-State Models (Version 2.3.2)

2011
fluoSurv: Estimate Insect Survival from Fluorescence Data (Version 1.0.0)

2018
forestmodel: Forest Plots from Regression Models (Version 0.6.2)

2015
forplo: Flexible Forest Plots (Version 0.2.5)

2021
forsearch: Diagnostic Analysis Using Forward Search Procedure for Various Models (Version 6.3.0)

2022
frailtyEM: Fitting Frailty Models with the EM Algorithm (Version 1.0.1)

2017
frailtyHL: Frailty Models via Hierarchical Likelihood (Version 2.3)

2011
frailtyMMpen: Efficient Algorithm for High-Dimensional Frailty Model (Version 1.2.1)

2023
frailtySurv: General Semiparametric Shared Frailty Model (Version 1.3.8)

2015
frailtypack: Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints (Version 3.6.5)

2005
frequentistSSD: Screened Selection Design with Survival Endpoints (Version 0.1.1)

2021
fwb: Fractional Weighted Bootstrap (Version 0.2.0)

2022
gamair: Data for 'GAMs: An Introduction with R' (Version 1.0-2)

2005
gamboostLSS: Boosting Methods for 'GAMLSS' (Version 2.0-7)

2011
gamlss.cens: Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions (Version 5.0-7)

2007
gamlss.inf: Fitting Mixed (Inflated and Adjusted) Distributions (Version 1.0-1)

2017
gamlss: Generalized Additive Models for Location Scale and Shape (Version 5.4-22)

2012
gap: Genetic Analysis Package (Version 1.6)

2004
gbm: Generalized Boosted Regression Models (Version 2.2.2)

2003
gcerisk: Generalized Competing Event Model (Version 19.05.24)

2016
geecure: Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations (Version 1.0-6)

2017
genSurv: Generating Multi-State Survival Data (Version 1.0.4)

2012
gestate: Generalised Survival Trial Assessment Tool Environment (Version 1.6.0)

2019
gfoRmula: Parametric G-Formula (Version 1.1.0)

2019
ggRandomForests: Visually Exploring Random Forests (Version 2.2.1)

2014
ggeffects: Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs (Version 2.0.0)

2017
ggformula: Formula Interface to the Grammar of Graphics (Version 0.12.0)

2017
ggfortify: Data Visualization Tools for Statistical Analysis Results (Version 0.4.17)

2015
ggparty: 'ggplot' Visualizations for the 'partykit' Package (Version 1.0.0)

2019
ggplot2.utils: Selected Utilities Extending 'ggplot2' (Version 0.3.2)

2023
ggpolar: Dots and Their Connections in Polar Coordinate System (Version 0.2.2)

2021
ggquickeda: Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables (Version 0.3.1)

2018
ggrisk: Risk Score Plot for Cox Regression (Version 1.3)

2020
ggscidca: Plotting Decision Curve Analysis with Coloured Bars (Version 0.2.3)

2024
ggstats: Extension to 'ggplot2' for Plotting Stats (Version 0.7.0)

2022
ggstatsplot: 'ggplot2' Based Plots with Statistical Details (Version 0.13.0)

2018
ggsurvfit: Flexible Time-to-Event Figures (Version 1.1.0)

2022
glm.predict: Predicted Values and Discrete Changes for Regression Models (Version 4.3-0)

2016
glmglrt: GLRT P-Values in Generalized Linear Models (Version 0.2.2)

2020
glmmPen: High Dimensional Penalized Generalized Linear Mixed Models (pGLMM) (Version 1.5.4.8)

2022
glmnet: Lasso and Elastic-Net Regularized Generalized Linear Models (Version 4.1-8)

2008
glmnetr: Nested Cross Validation for the Relaxed Lasso and Other Machine Learning Models (Version 0.5-4)

2022
glmpath: L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model (Version 0.98)

2005
glmulti: Model Selection and Multimodel Inference Made Easy (Version 1.0.8)

2009
gmvjoint: Joint Models of Survival and Multivariate Longitudinal Data (Version 0.4.5)

2022
gofreg: Bootstrap-Based Goodness-of-Fit Tests for Parametric Regression (Version 1.0.0)

2024
grImport: Importing Vector Graphics (Version 0.9-7)

2006
graphPAF: Estimating and Displaying Population Attributable Fractions (Version 2.0.0)

2022
gravity: Estimation Methods for Gravity Models (Version 1.1)

2017
greport: Graphical Reporting for Clinical Trials (Version 0.7-4)

2014
grf: Generalized Random Forests (Version 2.4.0)

2017
grpreg: Regularization Paths for Regression Models with Grouped Covariates (Version 3.5.0)

2008
gsDesign2: Group Sequential Design with Non-Constant Effect (Version 1.1.3)

2023
gsMAMS: Group Sequential Designs of Multi-Arm Multi-Stage Trials (Version 0.7.2)

2023
gte: Generalized Turnbull's Estimator (Version 1.2-3)

2013
gtsummary: Presentation-Ready Data Summary and Analytic Result Tables (Version 2.0.4)

2019
h2o: R Interface for the 'H2O' Scalable Machine Learning Platform (Version 3.44.0.3)

2014
hal9001: The Scalable Highly Adaptive Lasso (Version 0.4.6)

2020
haplo.ccs: Estimate Haplotype Relative Risks in Case-Control Data (Version 1.3.2)

2006
hdbma: Bayesian Mediation Analysis with High-Dimensional Data (Version 1.0)

2023
hdcuremodels: Penalized Mixture Cure Models for High-Dimensional Data (Version 0.0.1)

2024
hdnom: Benchmarking and Visualization Toolkit for Penalized Cox Models (Version 6.0.4)

2015
hds: Hazard Discrimination Summary (Version 0.8.1)

2016
heemod: Markov Models for Health Economic Evaluations (Version 1.0.2)

2015
hesim: Health Economic Simulation Modeling and Decision Analysis (Version 0.5.5)

2017
highMLR: Feature Selection for High Dimensional Survival Data (Version 0.1.1)

2021
highcharter: A Wrapper for the 'Highcharts' Library (Version 0.9.4)

2016
homomorpheR: Homomorphic Computations in R (Version 0.2-2)

2015
horseshoenlm: Nonlinear Regression using Horseshoe Prior (Version 0.0.6)

2020
hrcomprisk: Nonparametric Assessment Between Competing Risks Hazard Ratios (Version 0.1.1)

2020
iBST: Improper Bagging Survival Tree (Version 1.2)

2017
iClusterVB: Fast Integrative Clustering and Feature Selection for High Dimensional Data (Version 0.1.4)

2024
iNZightRegression: Tools for Exploring Regression Models with 'iNZight' (Version 1.3.4)

2020
icenReg: Regression Models for Interval Censored Data (Version 2.0.16)

2015
icensBKL: Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre (Version 1.5)

2017
icmstate: Interval Censored Multi-State Models (Version 0.1.1)

2024
icpack: Survival Analysis of Interval-Censored Data (Version 0.1.0)

2024
idem: Inference in Randomized Controlled Trials with Death and Missingness (Version 5.2)

2016
imsig: Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours (Version 1.1.3)

2018
incubate: Parametric Time-to-Event Analysis with Variable Incubation Phases (Version 1.3.0)

2022
injurytools: A Toolkit for Sports Injury Data Analysis (Version 1.0.3)

2023
insight: Easy Access to Model Information for Various Model Objects (Version 1.0.0)

2019
interactionRCS: Calculate Estimates in Models with Interaction (Version 0.1.1)

2022
interval: Weighted Logrank Tests and NPMLE for Interval Censored Data (Version 1.1-1.0)

2009
invGauss: Threshold Regression that Fits the (Randomized Drift) Inverse Gaussian Distribution to Survival Data (Version 1.2)

2014
ipcwswitch: Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials (Version 1.0.4)

2018
ipflasso: Integrative Lasso with Penalty Factors (Version 1.1)

2015
ipred: Improved Predictors (Version 0.9-15)

2002
ipw: Estimate Inverse Probability Weights (Version 1.2.1)

2010
ipwCoxCSV: Inverse Probability Weighted Cox Model with Corrected Sandwich Variance (Version 1.0)

2019
irboost: Iteratively Reweighted Boosting for Robust Analysis (Version 0.1-1.5)

2022
isoSurv: Isotonic Regression on Survival Analysis (Version 0.3.0)

2020
ivtools: Instrumental Variables (Version 2.3.0)

2018
jlctree: Joint Latent Class Trees for Joint Modeling of Time-to-Event and Longitudinal Data (Version 0.0.2)

2018
jmBIG: Joint Longitudinal and Survival Model for Big Data (Version 0.1.2)

2023
joint.Cox: Joint Frailty-Copula Models for Tumour Progression and Death in Meta-Analysis (Version 3.16)

2015
jomo: Multilevel Joint Modelling Multiple Imputation (Version 2.7-6)

2014
joineR: Joint Modelling of Repeated Measurements and Time-to-Event Data (Version 1.2.8)

2012
joineRML: Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes (Version 0.4.6)

2016
jskm: Kaplan-Meier Plot with 'ggplot2' (Version 0.5.6)

2019
jstable: Create Tables from Different Types of Regression (Version 1.3.8)

2019
jsmodule: 'RStudio' Addins and 'Shiny' Modules for Medical Research (Version 1.6.0)

2019
kdry: K's "Don't Repeat Yourself"-Collection (Version 0.0.2)

2023
kernhaz: Kernel Estimation of Hazard Function in Survival Analysis (Version 0.1.0)

2018
kin.cohort: Analysis of Kin-Cohort Studies (Version 0.7)

2007
km.ci: Confidence Intervals for the Kaplan-Meier Estimator (Version 0.5-6)

2006
kmc: Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm (Version 0.4-2)

2013
kmi: Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting (Version 0.5.5)

2009
kyotil: Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies (Version 2024.11-01)

2013
landest: Landmark Estimation of Survival and Treatment Effect (Version 1.2)

2015
landmulti: Landmark Prediction with Multiple Short-Term Events (Version 0.5.0)

2023
landpred: Landmark Prediction of a Survival Outcome (Version 1.2)

2014
lava: Latent Variable Models (Version 1.8.0)

2012
lavaSearch2: Tools for Model Specification in the Latent Variable Framework (Version 2.0.3)

2018
lcmm: Extended Mixed Models Using Latent Classes and Latent Processes (Version 2.1.0)

2010
lillies: Estimation of Life Years Lost (Version 0.2.12)

2019
lilikoi: Metabolomics Personalized Pathway Analysis Tool (Version 2.1.1)

2018
linERR: Linear Excess Relative Risk Model (Version 1.0)

2016
lmtest: Testing Linear Regression Models (Version 0.9-40)

1999
lnmixsurv: Bayesian Mixture Log-Normal Survival Model (Version 3.1.6)

2024
lodGWAS: Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection (Version 1.0-7)

2015
longROC: Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores (Version 1.0)

2017
longitudinalcascade: Longitudinal Cascade (Version 0.3.2.6)

2019
lpl: Local Partial Likelihood Estimation and Simultaneous Confidence Band (Version 0.11)

2021
lrstat: Power and Sample Size Calculation for Non-Proportional Hazards and Beyond (Version 0.2.11)

2021
lss2: The Accelerated Failure Time Model to Right Censored Data Based on Least-Squares Principle (Version 1.1)

2019
luca: Likelihood Inference from Case-Control Data under Covariate Assumptions (Version 1.0-6)

2007
mRMRe: Parallelized Minimum Redundancy, Maximum Relevance (mRMR) (Version 2.1.2.2)

2012
mable: Maximum Approximate Bernstein/Beta Likelihood Estimation (Version 4.1.1)

2018
mMARCH.AC: Processing of Accelerometry Data with 'GGIR' in mMARCH (Version 2.9.4.0)

2022
maczic: Mediation Analysis for Count and Zero-Inflated Count Data (Version 1.0.0)

2020
marg: Approximate Marginal Inference for Regression-Scale Models (Version 1.2-2.1)

2009
marginalizedRisk: Estimating Marginalized Risk (Version 2024.5-17)

2021
marginaleffects: Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis Tests (Version 0.24.0)

2021
markovMSM: Methods for Checking the Markov Condition in Multi-State Survival Data (Version 0.1.3)

2021
maxcombo: The Group Sequential Max-Combo Test for Comparing Survival Curves (Version 1.0)

2020
maxstat: Maximally Selected Rank Statistics (Version 0.7-25)

2001
mboost: Model-Based Boosting (Version 2.9-11)

2006
mc2d: Tools for Two-Dimensional Monte-Carlo Simulations (Version 0.2.1)

2009
mccmeiv: Analysis of Matched Case Control Data with a Mismeasured Exposure that is Accompanied by Instrumental Variables (Version 2.1)

2018
mediation: Causal Mediation Analysis (Version 4.5.0)

2009
meerva: Analysis of Data with Measurement Error Using a Validation Subsample (Version 0.2-2)

2021
metaSurvival: Meta-Analysis of a Single Survival Curve (Version 0.1.0)

2020
metafor: Meta-Analysis Package for R (Version 4.6-0)

2009
mets: Analysis of Multivariate Event Times (Version 1.3.4)

2012
mexhaz: Mixed Effect Excess Hazard Models (Version 2.6)

2016
mfp: Multivariable Fractional Polynomials (Version 1.5.4.1)

2004
mfp2: Multivariable Fractional Polynomial Models with Extensions (Version 1.0.0)

2023
mgcv: Mixed GAM Computation Vehicle with Automatic Smoothness Estimation (Version 1.9-1)

2000
mhazard: Nonparametric and Semiparametric Methods for Multivariate Failure Time Data (Version 0.2.3)

2020
mhurdle: Multiple Hurdle Tobit Models (Version 1.3-1)

2010
mi: Missing Data Imputation and Model Checking (Version 1.1)

2008
miCoPTCM: Promotion Time Cure Model with Mis-Measured Covariates (Version 1.1)

2016
miRecSurv: Left-Censored Recurrent Events Survival Models (Version 1.0.2)

2020
miWQS: Multiple Imputation Using Weighted Quantile Sum Regression (Version 0.4.4)

2018
mice: Multivariate Imputation by Chained Equations (Version 3.17.0)

2006
miceafter: Data and Statistical Analyses after Multiple Imputation (Version 0.5.0)

2021
microsimulation: Discrete Event Simulation in R and C++, with Tools for Cost-Effectiveness Analysis (Version 1.4.4)

2021
missDeaths: Simulating and Analyzing Time to Event Data in the Presence of Population Mortality (Version 2.8)

2015
mitml: Tools for Multiple Imputation in Multilevel Modeling (Version 0.4-5)

2015
mixPHM: Mixtures of Proportional Hazard Models (Version 0.7-2)

2007
mixcure: Mixture Cure Models (Version 2.0)

2020
mixtools: Tools for Analyzing Finite Mixture Models (Version 2.0.0)

2006
mlma: Multilevel Mediation Analysis (Version 6.3-1)

2015
mlr: Machine Learning in R (Version 2.19.2)

2013
mlr3filters: Filter Based Feature Selection for 'mlr3' (Version 0.8.1)

2019
mlsurvlrnrs: R6-Based ML Survival Learners for 'mlexperiments' (Version 0.0.4)

2023
mlt.docreg: Most Likely Transformations: Documentation and Regression Tests (Version 1.1-10)

2016
mlt: Most Likely Transformations (Version 1.6-1)

2016
mma: Multiple Mediation Analysis (Version 10.7-1)

2015
mmabig: Multiple Mediation Analysis for Big Data Sets (Version 3.2-0)

2018
mmc: Multivariate Measurement Error Correction (Version 0.0.3)

2015
modeLLtest: Compare Models with Cross-Validated Log-Likelihood (Version 1.0.4)

2019
model4you: Stratified and Personalised Models Based on Model-Based Trees and Forests (Version 0.9-8)

2018
modelsummary: Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready (Version 2.2.0)

2019
modgo: Mock Data Generation (Version 1.0.1)

2024
mombf: Model Selection with Bayesian Methods and Information Criteria (Version 3.5.4)

2008
momentuHMM: Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models (Version 1.5.5)

2017
moonBook: Functions and Datasets for the Book by Keon-Woong Moon (Version 0.3.1)

2014
mpr: Multi-Parameter Regression (MPR) (Version 1.0.6)

2016
mratios: Ratios of Coefficients in the General Linear Model (Version 1.4.2)

2006
muhaz: Hazard Function Estimation in Survival Analysis (Version 1.2.6.4)

2001
multcomp: Simultaneous Inference in General Parametric Models (Version 1.4-26)

2002
multinma: Bayesian Network Meta-Analysis of Individual and Aggregate Data (Version 0.7.2)

2020
multipleNCC: Weighted Cox-Regression for Nested Case-Control Data (Version 1.2-4)

2014
multipleOutcomes: Asymptotic Covariance Matrix of Regression Models for Multiple Outcomes (Version 0.4)

2024
multiridge: Fast Cross-Validation for Multi-Penalty Ridge Regression (Version 1.11)

2021
multisite.accuracy: Estimation of Accuracy in Multisite Machine-Learning Models (Version 1.3)

2021
multiview: Cooperative Learning for Multi-View Analysis (Version 0.8)

2022
mxfda: A Functional Data Analysis Package for Spatial Single Cell Data (Version 0.2.2)

2024
ncvreg: Regularization Paths for SCAD and MCP Penalized Regression Models (Version 3.14.3)

2009
netdiffuseR: Analysis of Diffusion and Contagion Processes on Networks (Version 1.22.6)

2016
obliqueRSF: Oblique Random Forests for Right-Censored Time-to-Event Data (Version 0.1.2)

2018
oceCens: Ordered Composite Endpoints with Censoring (Version 0.1.2)

2022
opera: Online Prediction by Expert Aggregation (Version 1.2.0)

2016
optband: 'surv' Object Confidence Bands Optimized by Area (Version 0.2.2)

2016
ordinalgmifs: Ordinal Regression for High-Dimensional Data (Version 1.0.8)

2014
orthoDr: Semi-Parametric Dimension Reduction Models Using Orthogonality Constrained Optimization (Version 0.6.8)

2017
oscar: Optimal Subset Cardinality Regression (OSCAR) Models Using the L0-Pseudonorm (Version 1.2.1)

2022
otrKM: Optimal Treatment Regimes in Survival Contexts with Kaplan-Meier-Like Estimators (Version 0.2.1)

2023
outreg: Regression Table for Publication (Version 0.2.2)

2017
p3state.msm: Analyzing Survival Data from an Illness-Death Model (Version 1.3.2)

2009
packHV: A few Useful Functions for Statisticians (Version 2.2)

2012
palasso: Sparse Regression with Paired Covariates (Version 1.0.0)

2018
pammtools: Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis (Version 0.5.93)

2018
pamr: Pam: Prediction Analysis for Microarrays (Version 1.57)

2003
pander: An R 'Pandoc' Writer (Version 0.6.5)

2012
papeR: A Toolbox for Writing Pretty Papers and Reports (Version 1.0-5)

2013
parTimeROC: Parametric Time-Dependent Receiver Operating Characteristic (Version 0.1.0)

2024
parameters: Processing of Model Parameters (Version 0.24.0)

2019
parfm: Parametric Frailty Models (Version 2.7.7)

2012
parmsurvfit: Parametric Models for Survival Data (Version 0.1.0)

2018
partDSA: Partitioning Using Deletion, Substitution, and Addition Moves (Version 0.9.14)

2013
parsnip: A Common API to Modeling and Analysis Functions (Version 1.2.1)

2018
party: A Laboratory for Recursive Partytioning (Version 1.3-17)

2005
partykit: A Toolkit for Recursive Partytioning (Version 1.2-23)

2011
pathwayTMB: Pathway Based Tumor Mutational Burden (Version 0.1.3)

2021
pbatR: Pedigree/Family-Based Genetic Association Tests Analysis and Power (Version 2.2-17)

2005
pch: Piecewise Constant Hazard Models for Censored and Truncated Data (Version 2.1)

2015
pcvr: Plant Phenotyping and Bayesian Statistics (Version 1.1.1.0)

2024
pda: Privacy-Preserving Distributed Algorithms (Version 1.2.7)

2020
pder: Panel Data Econometrics with R (Version 1.0-2)

2017
pec: Prediction Error Curves for Risk Prediction Models in Survival Analysis (Version 2023.04.12)

2008
penPHcure: Variable Selection in PH Cure Model with Time-Varying Covariates (Version 1.0.2)

2019
penalized: L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model (Version 0.9-52)

2007
penalizedclr: Integrative Penalized Conditional Logistic Regression (Version 2.0.0)

2021
pencal: Penalized Regression Calibration (PRC) for the Dynamic Prediction of Survival (Version 2.2.2)

2020
pensim: Simulation of High-Dimensional Data and Parallelized Repeated Penalized Regression (Version 1.3.6)

2011
peperr: Parallelised Estimation of Prediction Error (Version 1.5)

2008
performance: Assessment of Regression Models Performance (Version 0.12.4)

2019
permGS: Permutational Group Sequential Test for Time-to-Event Data (Version 0.2.5)

2017
permimp: Conditional Permutation Importance (Version 1.0-2)

2020
personalized: Estimation and Validation Methods for Subgroup Identification and Personalized Medicine (Version 0.2.7)

2017
ph2bye: Phase II Clinical Trial Design Using Bayesian Methods (Version 0.1.4)

2016
ph2mult: Phase II Clinical Trial Design for Multinomial Endpoints (Version 0.1.1)

2016
phers: Calculate Phenotype Risk Scores (Version 1.0.2)

2022
phyloregion: Biogeographic Regionalization and Macroecology (Version 1.0.8)

2020
pillar: Coloured Formatting for Columns (Version 1.9.0)

2017
plac: A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data (Version 0.1.3)

2016
plasma: Partial LeAst Squares for Multiomic Analysis (Version 1.1.3)

2022
pldamixture: Post-Linkage Data Analysis Based on Mixture Modelling (Version 0.1.1)

2024
plgraphics: User Oriented Plotting Functions (Version 1.2)

2023
plsRcox: Partial Least Squares Regression for Cox Models and Related Techniques (Version 1.7.7)

2011
plsmselect: Linear and Smooth Predictor Modelling with Penalisation and Variable Selection (Version 0.2.0)

2019
pmartR: Panomics Marketplace - Quality Control and Statistical Analysis for Panomics Data (Version 2.4.6)

2023
pmcalibration: Calibration Curves for Clinical Prediction Models (Version 0.1.0)

2023
pmml: Generate PMML for Various Models (Version 2.5.2)

2007
pmxpartab: Parameter Tables for PMx Analyses (Version 0.5.0)

2022
polle: Policy Learning (Version 1.5)

2022
popEpi: Functions for Epidemiological Analysis using Population Data (Version 0.4.12)

2015
postGGIR: Data Processing after Running 'GGIR' for Accelerometer Data (Version 2.4.0.2)

2021
powerSurvEpi: Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies (Version 0.1.3)

2009
pre: Prediction Rule Ensembles (Version 1.0.7)

2016
precmed: Precision Medicine (Version 1.1.0)

2022
predRupdate: Prediction Model Validation and Updating (Version 0.2.0)

2023
prediction: Tidy, Type-Safe 'prediction()' Methods (Version 0.3.18)

2016
prioritylasso: Analyzing Multiple Omics Data with an Offset Approach (Version 0.3.1)

2017
prodlim: Product-Limit Estimation for Censored Event History Analysis (Version 2024.06.25)

2008
psBayesborrow: Bayesian Information Borrowing with Propensity Score Matching (Version 1.1.0)

2024
psbcGroup: Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors (Version 1.7)

2013
psbcSpeedUp: Penalized Semiparametric Bayesian Cox Models (Version 2.0.7)

2023
psborrow: Bayesian Dynamic Borrowing with Propensity Score (Version 0.2.1)

2021
psborrow2: Bayesian Dynamic Borrowing Analysis and Simulation (Version 0.0.3.4)

2024
psc: Personalised Synthetic Controls (Version 1.1.0)

2024
pseval: Methods for Evaluating Principal Surrogates of Treatment Response (Version 1.3.1)

2015
psfmi: Prediction Model Pooling, Selection and Performance Evaluation Across Multiply Imputed Datasets (Version 1.4.0)

2019
psm3mkv: Evaluate Partitioned Survival and State Transition Models (Version 0.3.2)

2024
pubh: A Toolbox for Public Health and Epidemiology (Version 2.0.0)

2018
purge: Purge Training Data from Models (Version 0.2.1)

2015
qgcompint: Quantile G-Computation Extensions for Effect Measure Modification (Version 0.7.0)

2021
qgcomp: Quantile G-Computation (Version 2.15.2)

2019
qrcm: Quantile Regression Coefficients Modeling (Version 3.1)

2015
qrcmNP: Nonlinear and Penalized Quantile Regression Coefficients Modeling (Version 0.2.1)

2017
qris: Quantile Regression Model for Residual Lifetime Using an Induced Smoothing Approach (Version 1.1.1)

2022
quantreg: Quantile Regression (Version 5.99.1)

1999
quickReg: Build Regression Models Quickly and Display the Results Using 'ggplot2' (Version 1.5.0)

2016
qvcalc: Quasi Variances for Factor Effects in Statistical Models (Version 1.0.3)

2002
qwraps2: Quick Wraps 2 (Version 0.6.1)

2015
randomForestSRC: Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC) (Version 3.3.1)

2012
randomGLM: Random General Linear Model Prediction (Version 1.10-1)

2013
randomizeR: Randomization for Clinical Trials (Version 3.0.2)

2015
ranger: A Fast Implementation of Random Forests (Version 0.17.0)

2015
rankhazard: Rank-Hazard Plots (Version 1.1.0)

2009
rattle: Graphical User Interface for Data Science in R (Version 5.5.1)

2013
rcssci: Visualization of Restricted Cubic Splines (Version 0.4.0)

2022
reReg: Recurrent Event Regression (Version 1.4.7)

2015
recforest: Random Survival Forest for Recurrent Events (Version 1.0.0)

2024
recodeflow: Interface Functions for PMML Creation, and Data Recoding (Version 0.1.0)

2021
reconstructKM: Reconstruct Individual-Level Data from Published KM Plots (Version 0.3.0)

2020
recurrentpseudo: Creates Pseudo-Observations and Analysis for Recurrent Event Data (Version 1.0.0)

2022
regmedint: Regression-Based Causal Mediation Analysis with Interaction and Effect Modification Terms (Version 1.0.1)

2020
regplot: Enhanced Regression Nomogram Plot (Version 1.1)

2017
regport: Regression Model Processing Port (Version 0.3.0)

2022
relevance: Calculate Relevance and Significance Measures (Version 2.1)

2021
relsurv: Relative Survival (Version 2.2-9)

2005
remiod: Reference-Based Multiple Imputation for Ordinal/Binary Response (Version 1.0.2)

2022
remss: Refining Evaluation Methodology on Stage System (Version 1.0.1)

2019
report: Automated Reporting of Results and Statistical Models (Version 0.5.9)

2021
reportRmd: Tidy Presentation of Clinical Reporting (Version 0.1.0)

2022
reporttools: Generate "LaTeX"" Tables of Descriptive Statistics (Version 1.1.3)

2008
reservr: Fit Distributions and Neural Networks to Censored and Truncated Data (Version 0.0.3)

2022
riAFTBART: A Flexible Approach for Causal Inference with Multiple Treatments and Clustered Survival Outcomes (Version 0.3.3)

2022
ricu: Intensive Care Unit Data with R (Version 0.5.6)

2020
rigr: Regression, Inference, and General Data Analysis Tools in R (Version 1.0.4)

2021
rineq: Concentration Index and Decomposition for Health Inequalities (Version 0.2.3)

2023
riskRegression: Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks (Version 2023.12.21)

2011
risksetROC: Riskset ROC Curve Estimation from Censored Survival Data (Version 1.0.4.1)

2008
rmdl: Language to Manage Many Models (Version 0.1.0)

2024
rms: Regression Modeling Strategies (Version 6.9-0)

2009
rmsb: Bayesian Regression Modeling Strategies (Version 1.1-1)

2020
rmstcompsens: Comparing Restricted Mean Survival Time as Sensitivity Analysis (Version 0.1.5)

2023
rocTree: Receiver Operating Characteristic (ROC)-Guided Classification and Survival Tree (Version 1.1.1)

2019
rolr: Finding Optimal Three-Group Splits Based on a Survival Outcome (Version 1.0.0)

2017
rpart: Recursive Partitioning and Regression Trees (Version 4.1.23)

1999
rprev: Estimating Disease Prevalence from Registry Data (Version 1.0.5)

2016
rpsftm: Rank Preserving Structural Failure Time Models (Version 1.2.9)

2016
rsides: SIDES-Based Subgroup Search Algorithms (Version 0.1)

2024
rsimsum: Analysis of Simulation Studies Including Monte Carlo Error (Version 0.13.0)

2018
rsmatch: Matching Methods for Time-Varying Observational Studies (Version 0.2.1)

2023
rstanarm: Bayesian Applied Regression Modeling via Stan (Version 2.32.1)

2016
rstpm2: Smooth Survival Models, Including Generalized Survival Models (Version 1.6.6)

2015
rsurv: Random Generation of Survival Data (Version 0.0.2)

2024
rtables: Reporting Tables (Version 0.6.10)

2021
sGBJ: Survival Extension of the Generalized Berk-Jones Test (Version 0.1.0)

2021
sMSROC: Assessment of Diagnostic and Prognostic Markers (Version 0.1.2)

2022
saemix: Stochastic Approximation Expectation Maximization (SAEM) Algorithm (Version 3.3)

2011
safestats: Safe Anytime-Valid Inference (Version 0.8.7)

2022
sandwich: Robust Covariance Matrix Estimators (Version 3.1-1)

2004
scRNAtools: Single Cell RNA Sequencing Data Analysis Tools (Version 1.0)

2018
season: Seasonal Analysis of Health Data (Version 0.3.15)

2009
seawaveQ: SEAWAVE-Q Model (Version 2.0.2)

2013
selectiveInference: Tools for Post-Selection Inference (Version 1.2.5)

2015
semicmprskcoxmsm: Use Inverse Probability Weighting to Estimate Treatment Effect for Semi Competing Risks Data (Version 0.2.0)

2022
seqDesign: Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints (Version 1.2)

2014
sglg: Fitting Semi-Parametric Generalized log-Gamma Regression Models (Version 0.2.2)

2017
sharp: Stability-enHanced Approaches using Resampling Procedures (Version 1.4.6)

2022
shinyCox: Create 'shiny' Applications for Cox Proportional Hazards Models (Version 1.1.2)

2023
shinyPredict: Predictions using Shiny (Version 0.1.1)

2021
shrink: Global, Parameterwise and Joint Shrinkage Factor Estimation (Version 1.2.3)

2013
sievePH: Sieve Analysis Methods for Proportional Hazards Models (Version 1.1)

2019
signatureSurvival: Signature Survival Analysis (Version 1.0.0)

2023
sim.BA: Simulation-Based Bias Analysis for Observational Studies (Version 0.1.0)

2024
simIDM: Simulating Oncology Trials using an Illness-Death Model (Version 0.1.0)

2023
simMSM: Simulation of Event Histories for Multi-State Models (Version 1.1.42)

2013
simPH: Simulate and Plot Estimates from Cox Proportional Hazards Models (Version 1.3.13)

2013
simex: SIMEX- And MCSIMEX-Algorithm for Measurement Error Models (Version 1.8)

2005
simexaft: simexaft (Version 1.0.7.1)

2010
simsurv: Simulate Survival Data (Version 1.0.0)

2017
simstudy: Simulation of Study Data (Version 0.8.1)

2016
simtrial: Clinical Trial Simulation (Version 0.4.2)

2023
sirus: Stable and Interpretable RUle Set (Version 0.3.3)

2019
skpr: Design of Experiments Suite: Generate and Evaluate Optimal Designs (Version 1.7.1)

2017
smcfcs: Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification (Version 1.9.1)

2015
smcure: Fit Semiparametric Mixture Cure Models (Version 2.1)

2012
smdi: Perform Structural Missing Data Investigations (Version 0.3.1)

2023
smof: Scoring Methodology for Ordered Factors (Version 1.2.2)

2023
smoothHR: Smooth Hazard Ratio Curves Taking a Reference Value (Version 1.0.5)

2013
smoothROCtime: Smooth Time-Dependent ROC Curve Estimation (Version 0.1.0)

2018
smoothSurv: Survival Regression with Smoothed Error Distribution (Version 2.6)

2003
sox: Structured Learning in Time-Dependent Cox Models (Version 1.2.1)

2023
sp23design: Design and Simulation of Seamless Phase II-III Clinical Trials (Version 0.9-1)

2014
spBayesSurv: Bayesian Modeling and Analysis of Spatially Correlated Survival Data (Version 1.1.8)

2014
sparseR: Variable Selection under Ranked Sparsity Principles for Interactions and Polynomials (Version 0.3.1)

2022
spatsurv: Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models (Version 2.0-1)

2014
spef: Semiparametric Estimating Functions (Version 1.0.9)

2010
speff2trial: Semiparametric Efficient Estimation for a Two-Sample Treatment Effect (Version 1.0.5)

2009
spsurv: Bernstein Polynomial Based Semiparametric Survival Analysis (Version 1.0.0)

2020
squant: Subgroup Identification Based on Quantitative Objectives (Version 1.1.7)

2022
srvyr: 'dplyr'-Like Syntax for Summary Statistics of Survey Data (Version 1.3.0)

2016
ssMutPA: Single-Sample Mutation-Based Pathway Analysis (Version 0.1.2)

2024
ssym: Fitting Semi-Parametric log-Symmetric Regression Models (Version 1.5.8)

2014
starnet: Stacked Elastic Net (Version 0.0.7)

2020
stargazer: Well-Formatted Regression and Summary Statistics Tables (Version 5.2.3)

2012
statsExpressions: Tidy Dataframes and Expressions with Statistical Details (Version 1.6.2)

2019
stdReg: Regression Standardization (Version 3.4.1)

2016
stdReg2: Regression Standardization for Causal Inference (Version 1.0.1)

2024
stepp: Subpopulation Treatment Effect Pattern Plot (STEPP) (Version 3.2.7)

2012
stpm: Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes (Version 1.7.12)

2016
stratamatch: Stratification and Matching for Large Observational Data Sets (Version 0.1.9)

2019
subscreen: Systematic Screening of Study Data for Subgroup Effects (Version 3.0.7)

2017
success: Survival Control Charts Estimation Software (Version 1.1.0)

2022
superpc: Supervised Principal Components (Version 1.12)

2004
support.BWS: Tools for Case 1 Best-Worst Scaling (Version 0.4-6)

2013
support.BWS2: Tools for Case 2 Best-Worst Scaling (Version 0.4-0)

2017
support.BWS3: Tools for Case 3 Best-Worst Scaling (Version 0.2-1)

2019
support.CEs: Basic Functions for Supporting an Implementation of Choice Experiments (Version 0.7-0)

2011
surrosurv: Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses (Version 1.1.26)

2016
surrosurvROC: Surrogate Survival ROC (Version 0.1.0)

2018
surv2sampleComp: Inference for Model-Free Between-Group Parameters for Censored Survival Data (Version 1.0-5)

2013
survAH: Survival Data Analysis using Average Hazard (Version 1.0.0)

2023
survAUC: Estimators of Prediction Accuracy for Time-to-Event Data (Version 1.3-0)

2011
survAWKMT2: Two-Sample Tests Based on Differences of Kaplan-Meier Curves (Version 1.0.1)

2016
survBootOutliers: Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis (Version 1.0)

2018
survC1: C-Statistics for Risk Prediction Models with Censored Survival Data (Version 1.0-3)

2011
survCurve: Plots Survival Curves Element by Element (Version 1.0)

2020
survELtest: Comparing Multiple Survival Functions with Crossing Hazards (Version 2.0.1)

2018
survIDINRI: IDI and NRI for Comparing Competing Risk Prediction Models with Censored Survival Data (Version 1.1-2)

2012
survML: Tools for Flexible Survival Analysis Using Machine Learning (Version 1.2.0)

2023
survMisc: Miscellaneous Functions for Survival Data (Version 0.5.6)

2013
survParamSim: Parametric Survival Simulation with Parameter Uncertainty (Version 0.1.6)

2020
survRM2: Comparing Restricted Mean Survival Time (Version 1.0-4)

2015
survRM2adapt: Flexible and Coherent Test/Estimation Procedure Based on Restricted Mean Survival Times (Version 1.1.0)

2018
survRM2perm: Permutation Test for Comparing Restricted Mean Survival Time (Version 0.1.0)

2020
survSAKK: Create Publication Ready Kaplan-Meier Plots (Version 1.3.1)

2024
survSNP: Power Calculations for SNP Studies with Censored Outcomes (Version 0.26)

2012
survSens: Sensitivity Analysis with Time-to-Event Outcomes (Version 1.1.0)

2020
survcompare: Nested Cross-Validation to Compare Cox-PH, Cox-Lasso, Survival Random Forests (Version 0.2.0)

2024
survex: Explainable Machine Learning in Survival Analysis (Version 1.2.0)

2022
survexp.fr: Relative Survival, AER and SMR Based on French Death Rates (Version 1.1)

2013
survey: Analysis of Complex Survey Samples (Version 4.4-2)

2003
surveynnet: Neural Network for Complex Survey Data (Version 1.0.0)

2024
survival.svb: Fit High-Dimensional Proportional Hazards Models (Version 0.0-2)

2021
survidm: Inference and Prediction in an Illness-Death Model (Version 1.3.2)

2017
survivalAnalysis: High-Level Interface for Survival Analysis and Associated Plots (Version 0.3.0)

2018
survivalMPL: Penalised Maximum Likelihood for Survival Analysis Models (Version 0.2-3)

2014
survivalMPLdc: Penalised Likelihood for Survival Analysis with Dependent Censoring (Version 0.1.1)

2020
survivalPLANN: Neural Networks to Predict Survival (Version 0.1)

2024
survivalREC: Nonparametric Estimation of the Distribution of Gap Times for Recurrent Events (Version 1.1)

2022
survivalVignettes: Survival Analysis Vignettes and Optional Datasets (Version 0.1.6)

2024
survivalSL: Super Learner for Survival Prediction from Censored Data (Version 0.96)

2023
survivalmodels: Models for Survival Analysis (Version 0.1.191)

2020
survivalsvm: Survival Support Vector Analysis (Version 0.0.5)

2017
survminer: Drawing Survival Curves using 'ggplot2' (Version 0.5.0)

2016
survobj: Objects to Simulate Survival Times (Version 3.1.1)

2023
survout: Excel Conversion of R Surival Analysis Output (Version 0.1.0)

2022
survstan: Fitting Survival Regression Models via 'Stan' (Version 0.0.7.1)

2023
synthpop: Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control (Version 1.8-0)

2014
tLagInterim: Interim Monitoring of Clinical Trials with Time-Lagged Outcome (Version 1.0)

2022
tLagPropOdds: Proportional Odds Model with Censored, Time-Lagged Categorical Outcome (Version 1.9)

2021
tab: Create Summary Tables for Statistical Reports (Version 5.1.1)

2014
tableeasy: Tables of Clinical Study (Version 1.1.2)

2022
tableone: Create 'Table 1' to Describe Baseline Characteristics with or without Propensity Score Weights (Version 0.13.2)

2014
targeted: Targeted Inference (Version 0.5)

2020
tauProcess: Tau Measure with Right-Censored Data (Version 2.1.3)

2023
tbm: Transformation Boosting Machines (Version 0.3-6)

2019
tdROC: Nonparametric Estimation of Time-Dependent ROC, Brier Score, and Survival Difference from Right Censored Time-to-Event Data with or without Competing Risks (Version 2.0)

2016
tern: Create Common TLGs Used in Clinical Trials (Version 0.9.6)

2023
texmex: Statistical Modelling of Extreme Values (Version 2.4.9)

2010
texreg: Conversion of R Regression Output to LaTeX or HTML Tables (Version 1.39.4)

2012
tfCox: Fits Piecewise Polynomial with Data-Adaptive Knots in Cox Model (Version 0.1.0)

2019
tfrmt: Applies Display Metadata to Analysis Results Datasets (Version 0.1.3)

2022
threg: Threshold Regression (Version 1.0.3)

2013
thregI: Threshold Regression for Interval-Censored Data with a Cure Rate Option (Version 1.0.4)

2016
tidyCDISC: Quick Table Generation & Exploratory Analyses on ADaM-Ish Datasets (Version 0.2.1)

2022
tidycmprsk: Competing Risks Estimation (Version 1.1.0)

2021
tidytidbits: A Collection of Tools and Helpers Extending the Tidyverse (Version 0.3.2)

2018
timeEL: Time to Event Analysis via Empirical Likelihood Inference (Version 0.9.1)

2024
timeROC: Time-Dependent ROC Curve and AUC for Censored Survival Data (Version 0.4)

2012
timereg: Flexible Regression Models for Survival Data (Version 2.0.6)

2008
tinyarray: Expression Data Analysis and Visualization (Version 2.4.2)

2021
tnet: Weighted, Two-Mode, and Longitudinal Networks Analysis (Version 3.0.16)

2009
tornado: Plots for Model Sensitivity and Variable Importance (Version 0.1.3)

2022
trajmsm: Marginal Structural Models with Latent Class Growth Analysis of Treatment Trajectories (Version 0.1.3)

2024
tram: Transformation Models (Version 1.2-0)

2018
tramME: Transformation Models with Mixed Effects (Version 1.0.7)

2020
tramicp: Model-Based Causal Feature Selection for General Response Types (Version 0.0-2)

2023
tramnet: Penalized Transformation Models (Version 0.0-8)

2020
tramvs: Optimal Subset Selection for Transformation Models (Version 0.0-6)

2022
transmdl: Semiparametric Transformation Models (Version 0.1.0)

2021
treeshap: Compute SHAP Values for Your Tree-Based Models Using the 'TreeSHAP' Algorithm (Version 0.3.1)

2023
trtf: Transformation Trees and Forests (Version 0.4-2)

2018
trtswitch: Treatment Switching (Version 0.1.2)

2024
truncAIPW: Doubly Robust Estimation under Covariate-Induced Dependent Left Truncation (Version 1.0.1)

2023
truncreg: Truncated Gaussian Regression Models (Version 0.2-5)

2009
tsriadditive: Two Stage Residual Inclusion Additive Hazards Estimator (Version 1.0.0)

2020
tuneRanger: Tune Random Forest of the 'ranger' Package (Version 0.7)

2018
uni.survival.tree: A Survival Tree Based on Stabilized Score Tests for High-dimensional Covariates (Version 1.5)

2021
uniah: Unimodal Additive Hazards Model (Version 1.2)

2015
utile.tables: Build Tables for Publication (Version 0.3.0)

2019
utile.tools: Summarize Data for Publication (Version 0.3.0)

2019
utile.visuals: Create Visuals for Publication (Version 0.3.3)

2019
vaccine: Statistical Tools for Immune Correlates Analysis of Vaccine Clinical Trial Data (Version 1.2.1)

2023
vaccineff: Estimate Vaccine Effectiveness Based on Different Study Designs (Version 1.0.0)

2024
valorate: Velocity and Accuracy of the LOg-RAnk TEst (Version 1.0-1)

2016
vaxpmx: Vaccines Pharmacometrics (Version 0.0.6)

2024
visreg: Visualization of Regression Models (Version 2.7.0)

2012
vpc: Create Visual Predictive Checks (Version 1.2.2)

2017
vsd: Graphical Shim for Visual Survival Data Analysis (Version 0.1.0)

2021
wally: The Wally Calibration Plot for Risk Prediction Models (Version 1.0.10)

2017
wcox: Weights to Correct for Outcome Dependent Sampling in Time to Event Data (Version 1.0)

2023
wintime: Win Time Methods for Time-to-Event Data in Clinical Trials (Version 0.3.0)

2024
xhaz: Excess Hazard Modelling Considering Inappropriate Mortality Rates (Version 2.0.2)

2022
xlink: Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes (Version 1.0.1)

2019
xpose4: Diagnostics for Nonlinear Mixed-Effect Models (Version 4.7.3)

2010
xtable: Export Tables to LaTeX or HTML (Version 1.8-4)

2000
yardstick: Tidy Characterizations of Model Performance (Version 1.3.1)

2017
zlog: Z(log) Transformation for Laboratory Measurements (Version 1.0.2)

2021
ztable: Zebra-Striped Tables in LaTeX and HTML Formats (Version 0.2.3)

2014

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