msm: Multi-State Markov and Hidden Markov Models in Continuous Time

Canonical link: https://rscholar.com/pkg/msm

Christopher Jackson • View description and downloads View dependencies GitHub project

2002 Published

0 Citations

1 Authors

59 Revisions

1.8.2 Version

GPL-2 License

Referenced by ⇅	Year
iBATCGH: Integrative Bayesian Analysis of Transcriptomic and CGH Data (Version 1.3.1)	2014
WPC: Weighted Predictiveness Curve (Version 1.0)	2016
stUPscales: Spatio-Temporal Uncertainty Propagation Across Multiple Scales (Version 1.0.3.5)	2018
msmtools: Building Augmented Data to Run Multi-State Models with 'msm' Package (Version 2.0.1)	2016
ARCensReg: Fitting Univariate Censored Linear Regression Model with Autoregressive Errors (Version 3.0.1)	2016
ARDL: ARDL, ECM and Bounds-Test for Cointegration (Version 0.2.4)	2020
BSTZINB: Association Among Disease Counts and Socio-Environmental Factors (Version 2.0.0)	2024
BayesRGMM: Bayesian Robust Generalized Mixed Models for Longitudinal Data (Version 2.2)	2021
BayesianTools: General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics (Version 0.1.8)	2017
CEoptim: Cross-Entropy R Package for Optimization (Version 1.3)	2015
CensSpatial: Censored Spatial Models (Version 3.6)	2016
CopCTS: Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits (Version 1.0.0)	2018
DFIT: Differential Functioning of Items and Tests (Version 1.1)	2014
EAinference: Estimator Augmentation and Simulation-Based Inference (Version 0.2.3)	2017
EMC2: Bayesian Hierarchical Analysis of Cognitive Models of Choice (Version 3.0.0)	2024
EventPredInCure: Event Prediction Including Cured Population (Version 1.0)	2024
FLORAL: Fit Log-Ratio Lasso Regression for Compositional Data (Version 0.4.0)	2023
Families: Kinship Ties in (Virtual) Multi-Generation Populations (Version 2.0.2)	2022
ICcalib: Cox Model with Interval-Censored Starting Time of a Covariate (Version 1.0.8)	2018
MCMCglmm: MCMC Generalised Linear Mixed Models (Version 2.36)	2009
OneSampleMR: One Sample Mendelian Randomization and Instrumental Variable Analyses (Version 0.1.5)	2021
PRIMEplus: Study Design for Immunotherapy Clinical Trials (Version 1.0.16)	2024
PanCanVarSel: Pan-Cancer Variable Selection (Version 0.0.3)	2019
Petersen: Estimators for Two-Sample Capture-Recapture Studies (Version 2025.3.1)	2023
RMark: R Code for Mark Analysis (Version 3.0.0)	2011
Rchoice: Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters (Version 0.3-6)	2014
SPAS: Stratified-Petersen Analysis System (Version 2025.2.1)	2019
SightabilityModel: Wildlife Sightability Modeling (Version 1.5.5)	2012
SizeEstimation: Estimating the Sizes of Populations at Risk of HIV Infection from Multiple Data Sources Using a Bayesian Hierarchical Model (Version 1.1.1)	2016
TrenchR: Tools for Microclimate and Biophysical Ecology (Version 1.1.1)	2022
TropFishR: Tropical Fisheries Analysis (Version 1.6.5)	2016
VirtualPop: Simulation of Populations by Sampling Waiting-Time Distributions (Version 2.0.2)	2022
ammiBayes: Bayesian Ammi Model for Continuous Data (Version 1.0-2)	2022
biodosetools: An R Shiny Application for Biological Dosimetry (Version 3.6.1)	2022
breakpoint: An R Package for Multiple Break-Point Detection via the Cross-Entropy Method (Version 1.2)	2014
bsam: Bayesian State-Space Models for Animal Movement (Version 1.1.3)	2016
ccostr: Estimation of Mean Costs in Censored Data (Version 0.1.0)	2019
ccrs: Correct and Cluster Response Style Biased Data (Version 0.1.0)	2019
cfda: Categorical Functional Data Analysis (Version 0.12.1)	2021
clustMD: Model Based Clustering for Mixed Data (Version 1.2.1)	2014
cosa: Bound Constrained Optimal Sample Size Allocation (Version 2.1.0)	2018
decisionSupport: Quantitative Support of Decision Making under Uncertainty (Version 1.114)	2015
difNLR: DIF and DDF Detection by Non-Linear Regression Models (Version 1.5.1-1)	2016
drugdevelopR: Utility-Based Optimal Phase II/III Drug Development Planning (Version 1.0.2)	2024
eatRep: Educational Assessment Tools for Replication Methods (Version 0.15.1)	2021
ei: Ecological Inference (Version 1.3-3)	2016
eiPack: Ecological Inference and Higher-Dimension Data Management (Version 0.2-2)	2006
elect: Estimation of Life Expectancies Using Multi-State Models (Version 1.2)	2018
endoSwitch: Endogenous Switching Regression Models (Version 1.0.0)	2020
epiphy: Analysis of Plant Disease Epidemics (Version 0.5.0)	2018
extrafrail: Estimation and Additional Tools for Alternative Shared Frailty Models (Version 1.12)	2022
fic: Focused Information Criteria for Model Comparison (Version 1.0.0)	2019
fitteR: Fit Hundreds of Theoretical Distributions to Empirical Data (Version 0.2.0)	2017
flexsurv: Flexible Parametric Survival and Multi-State Models (Version 2.3.2)	2011
frailtyEM: Fitting Frailty Models with the EM Algorithm (Version 1.0.1)	2017
gems: Generalized Multistate Simulation Model (Version 1.1.1)	2013
gmnl: Multinomial Logit Models with Random Parameters (Version 1.1-3.2)	2015
grmsem: Genetic-Relationship-Matrix Structural Equation Modelling (GRMSEM) (Version 1.1.0)	2021
hesim: Health Economic Simulation Modeling and Decision Analysis (Version 0.5.5)	2017
hmsr: Multipopulation Evolutionary Strategy HMS (Version 1.0.1)	2023
horseshoenlm: Nonlinear Regression using Horseshoe Prior (Version 0.0.6)	2020
httk: High-Throughput Toxicokinetics (Version 2.5.0)	2015
hysteresis: Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses (Version 2.7.2)	2013
icmstate: Interval Censored Multi-State Models (Version 0.1.1)	2024
interactionR: Full Reporting of Interaction Analyses (Version 0.1.7)	2020
interactionRCS: Calculate Estimates in Models with Interaction (Version 0.1.1)	2022
ltm: Latent Trait Models under IRT (Version 1.2-0)	2005
markovchain: Easy Handling Discrete Time Markov Chains (Version 0.10.0)	2013
nhm: Non-Homogeneous Markov and Hidden Markov Multistate Models (Version 0.1.1)	2019
optBiomarker: Estimation of Optimal Number of Biomarkers for Two-Group Microarray Based Classifications at a Given Error Tolerance Level for Various Classification Rules (Version 1.0-28)	2009
oro.pet: Rigorous - Positron Emission Tomography (Version 0.2.7)	2012
parfm: Parametric Frailty Models (Version 2.7.7)	2012
pder: Panel Data Econometrics with R (Version 1.0-2)	2017
pexm: Loading a JAGS Module for the Piecewise Exponential Distribution (Version 1.1.3)	2020
qte: Quantile Treatment Effects (Version 1.3.1)	2015
riAFTBART: A Flexible Approach for Causal Inference with Multiple Treatments and Clustered Survival Outcomes (Version 0.3.3)	2022
rriskDistributions: Fitting Distributions to Given Data or Known Quantiles (Version 2.1.2)	2012
rtdists: Response Time Distributions (Version 0.11-5)	2014
scDECO: Estimating Dynamic Correlation (Version 0.1.0)	2024
score: A Package to Score Behavioral Questionnaires (Version 1.0.2)	2015
semmcmc: Bayesian Structural Equation Modeling in Multiple Omics Data Integration (Version 0.0.6)	2021
simExam: Generate Simulated Data for IRT-Enabled Exams (Version 1.0.0)	2019
spBFA: Spatial Bayesian Factor Analysis (Version 1.3)	2019
spCP: Spatially Varying Change Points (Version 1.3)	2018
sparsereg: Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data (Version 1.2)	2015
stochLAB: Stochastic Collision Risk Model (Version 1.1.2)	2022
surrosurv: Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses (Version 1.1.26)	2016
surveillance: Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena (Version 1.24.1)	2005
tradepolicy: Replication of 'An Advanced Guide To Trade Policy Analysis' (Version 0.7.0)	2021
varTestnlme: Variance Components Testing for Linear and Nonlinear Mixed Effects Models (Version 1.3.5)	2020
womblR: Spatiotemporal Boundary Detection Model for Areal Unit Data (Version 1.0.5)	2017
wxgenR: A Stochastic Weather Generator with Seasonality (Version 1.4.2)	2023

RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN). Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.