permute: Functions for Generating Restricted Permutations of Data

Canonical link: https://rscholar.com/pkg/permute

Gavin L. Simpson • R Core Team • Douglas M. Bates • Jari Oksanen • View description and downloads View dependencies GitHub project

2011 Published

0.9-7 Version

0 Citations

4 Authors

Referenced by ⇅	Year
HierDpart: Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems (Version 1.5.0)	2018
MiRKAT: Microbiome Regression-Based Kernel Association Tests (Version 1.2.3)	2018
BiodiversityR: Package for Community Ecology and Suitability Analysis (Version 2.16-1)	2007
LDM: Testing Hypotheses About the Microbiome using the Linear Decomposition Model (Version 6.0.1)	2023
LorMe: Lightening One-Code Resolving Microbial Ecology Solution (Version 1.1.0)	2024
MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis (Version 0.10.1)	2024
NST: Normalized Stochasticity Ratio (Version 3.1.10)	2019
ProcMod: Informative Procrustean Matrix Correlation (Version 1.0.8)	2019
SYNCSA: Analysis of Functional and Phylogenetic Patterns in Metacommunities (Version 1.3.4)	2011
Storm: Write Storm Bolts in R using the Storm Multi-Language Protocol (Version 1.2)	2014
bipartite: Visualising Bipartite Networks and Calculating Some (Ecological) Indices (Version 2.20)	2007
brainGraph: Graph Theory Analysis of Brain MRI Data (Version 3.1.0)	2015
codyn: Community Dynamics Metrics (Version 2.0.5)	2015
douconca: Double Constrained Correspondence Analysis for Trait-Environment Analysis in Ecology (Version 1.2.1)	2024
ecostats: Code and Data Accompanying the Eco-Stats Text (Warton 2022) (Version 1.2.1)	2020
ggordiplots: Make 'ggplot2' Versions of Vegan's Ordiplots (Version 0.4.3)	2023
iCAMP: Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis (Version 1.5.12)	2020
indicspecies: Relationship Between Species and Groups of Sites (Version 1.7.15)	2010
mixAR: Mixture Autoregressive Models (Version 0.22.8)	2020
monoClust: Perform Monothetic Clustering with Extensions to Circular Data (Version 1.2.1)	2020
npcure: Nonparametric Estimation in Mixture Cure Models (Version 0.1-5)	2019
pRF: Permutation Significance for Random Forests (Version 1.2)	2015
pctax: Professional Comprehensive Omics Data Analysis (Version 0.1.1)	2024
permuco: Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals (Version 1.1.3)	2018
randomizationInference: Flexible Randomization-Based Inference (Version 1.0.4)	2013
rankdist: Distance Based Ranking Models (Version 1.1.4)	2015
spaceNet: Latent Space Models for Multidimensional Networks (Version 1.2)	2018
text2map: R Tools for Text Matrices, Embeddings, and Networks (Version 0.2.0)	2021
vegan: Community Ecology Package (Version 2.6-8)	2001

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