Referenced by ⇅
Year
Biopeak : Identification of Impulse-Like Gene Expression Changes in Short
Genomic Series Data (Version 1.0)
2019
BNPMIXcluster : Bayesian Nonparametric Model for Clustering with Mixed Scale
Variables (Version 1.3)
2016
cancerTiming : Estimation of Temporal Ordering of Cancer Abnormalities (Version 3.1.8)
2012
corregp : Functions and Methods for Correspondence Regression (Version 2.0.2)
2015
CSFA : Connectivity Scores with Factor Analysis (Version 1.2.0)
2018
delaunay : 2d, 2.5d, and 3d Delaunay Tessellations (Version 2.0.0)
2022
highSCREEN : High-Throughput Screening for Plate Based Essays (Version 0.4)
2016
liayson : Linking Singe-Cell Transcriptomes Atween Contemporary
Subpopulation Genomes (Version 1.0.5)
2018
momr : Mining Metaomics Data (MetaOMineR) (Version 1.1)
2015
NBBttest : Negative Binomial Beta t-Test (Version 1.0.1)
2020
qat : Quality Assurance Toolkit (Version 0.74)
2011
ReorderCluster : Reordering the Dendrogram According to the Class Labels (Version 2.0)
2014
rich : Computes and Compares Species Richnesses (Version 1.0.1)
2011
GSNA : Gene Set Networking Analysis Package (Version 0.1.4.2)
2024
MetaIntegrator : Meta-Analysis of Gene Expression Data (Version 2.1.3)
2016
FLLat : Fused Lasso Latent Feature Model (Version 1.2-1)
2011
boundingbox : Create a Bounding Box in an Image (Version 1.0.1)
2020
BAMMtools : Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees (Version 2.1.12)
2014
BSPBSS : Bayesian Spatial Blind Source Separation (Version 1.0.5)
2022
BayesMultMeta : Bayesian Multivariate Meta-Analysis (Version 0.1.1)
2022
BayesianMediationA : Bayesian Mediation Analysis (Version 1.0.1)
2022
CJIVE : Canonical Joint and Individual Variation Explained (CJIVE) (Version 0.1.0)
2023
CTD : A Method for 'Connecting The Dots' in Weighted Graphs (Version 1.3)
2020
CoFRA : Complete Functional Regulation Analysis (Version 0.1002)
2016
CoNI : Correlation Guided Network Integration (CoNI) (Version 0.1.0)
2021
DNMF : Discriminant Non-Negative Matrix Factorization (Version 1.4.2)
2015
DPBBM : Dirichlet Process Beta-Binomial Mixture (Version 0.2.5)
2016
DandEFA : Dandelion Plot for R-Mode Exploratory Factor Analysis (Version 1.6)
2012
DensParcorr : Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks (Version 1.1)
2016
FAMetA : Fatty Acid Metabolic Analysis (Version 0.1.6)
2021
FRESA.CAD : Feature Selection Algorithms for Computer Aided Diagnosis (Version 3.4.8)
2014
HMP : Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP (Version 2.0.1)
2011
HistData : Data Sets from the History of Statistics and Data Visualization (Version 0.9-1)
2009
IPV : Item Pool Visualization (Version 1.0.0)
2020
KSEAapp : Kinase-Substrate Enrichment Analysis (Version 0.99.0)
2017
LSDirf : Impulse-Response Function Analysis for Agent-Based Models (Version 0.1.3)
2024
MAnorm2 : Tools for Normalizing and Comparing ChIP-seq Samples (Version 1.2.2)
2021
MDplot : Visualising Molecular Dynamics Analyses (Version 1.0.1)
2016
MKmisc : Miscellaneous Functions from M. Kohl (Version 1.9)
2008
MLZ : Mean Length-Based Estimators of Mortality using TMB (Version 0.1.5)
2018
MOQA : Basic Quality Data Assurance for Epidemiological Research (Version 2.0.0)
2017
MetProc : Separate Metabolites into Likely Measurement Artifacts and True Metabolites (Version 1.0.1)
2016
MetabolAnalyze : Probabilistic Latent Variable Models for Metabolomic Data (Version 1.3.1)
2010
MicrobiomeSurv : Biomarker Validation for Microbiome-Based Survival Classification and Prediction (Version 0.1.0)
2023
MigConnectivity : Estimate Migratory Connectivity for Migratory Animals (Version 0.4.7)
2024
MoBPS : Modular Breeding Program Simulator (Version 1.6.64)
2020
MultBiplotR : Multivariate Analysis Using Biplots in R (Version 23.11.0)
2021
MultiGroupO : MultiGroup Method and Simulation Data Analysis (Version 0.4.0)
2022
NCA : Necessary Condition Analysis (Version 4.0.2)
2015
OmicsPLS : Data Integration with Two-Way Orthogonal Partial Least Squares (Version 2.0.2)
2017
PRISMA : Protocol Inspection and State Machine Analysis (Version 0.2-7)
2012
Path.Analysis : Path Coefficient Analysis (Version 0.1)
2024
Patterns : Deciphering Biological Networks with Patterned Heterogeneous Measurements (Version 1.5)
2019
RAMClustR : Mass Spectrometry Metabolomics Feature Clustering and Interpretation (Version 1.3.1)
2019
RCA : Relational Class Analysis (Version 2.0)
2013
RCDT : Fast 2D Constrained Delaunay Triangulation (Version 1.3.0)
2022
ROCR : Visualizing the Performance of Scoring Classifiers (Version 1.0-11)
2005
RPPanalyzer : Reads, Annotates, and Normalizes Reverse Phase Protein Array Data (Version 1.4.9)
2010
RcmdrPlugin.BiclustGUI : 'Rcmdr' Plug-in GUI for Biclustering (Version 1.1.3.1)
2016
RobMixReg : Robust Mixture Regression (Version 1.1.0)
2020
SAMtool : Stock Assessment Methods Toolkit (Version 1.8.0)
2021
SCINA : A Semi-Supervised Category Identification and Assignment Tool (Version 1.2.0)
2018
TIMP : Fitting Separable Nonlinear Models in Spectroscopy and Microscopy (Version 1.13.6)
2007
TopKLists : Inference, Aggregation and Visualization for Top-K Ranked Lists (Version 1.0.8)
2014
asymmetry : Multidimensional Scaling of Asymmetric Proximities (Version 2.0.4)
2016
bayess : Bayesian Essentials with R (Version 1.6)
2013
bingat : Binary Graph Analysis Tools (Version 1.3)
2014
caroline : A Collection of Database, Data Structure, Visualization, and Utility Functions for R (Version 0.9.9)
2009
cellVolumeDist : Functions to Fit Cell Volume Distributions and Thereby Estimate Cell Growth Rates and Division Times (Version 1.4)
2009
clusternomics : Integrative Clustering for Heterogeneous Biomedical Datasets (Version 0.1.1)
2016
colordistance : Distance Metrics for Image Color Similarity (Version 1.1.2)
2017
condvis : Conditional Visualization for Statistical Models (Version 0.5-1)
2016
corkscrew : Preprocessor for Data Modeling (Version 1.1)
2015
corto : Inference of Gene Regulatory Networks (Version 1.2.4)
2019
covid19.analytics : Load and Analyze Live Data from the COVID-19 Pandemic (Version 2.1.3.3)
2020
crmReg : Cellwise Robust M-Regression and SPADIMO (Version 1.0.2)
2020
crqa : Unidimensional and Multidimensional Methods for Recurrence Quantification Analysis (Version 2.0.6)
2013
dartR.captive : Analysing 'SNP' Data to Support Captive Breeding (Version 0.75)
2023
dartR.base : Analysing 'SNP' and 'Silicodart' Data - Basic Functions (Version 0.98)
2023
dartR.popgen : Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 1.0.0)
2023
dartR.spatial : Applying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data (Version 0.78)
2023
dartR : Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 2.9.7)
2017
dendextend : Extending 'dendrogram' Functionality in R (Version 1.19.0)
2014
dendsort : Modular Leaf Ordering Methods for Dendrogram Nodes (Version 0.3.4)
2014
difconet : Differential Coexpressed Networks (Version 1.0-4)
2017
enveomics.R : Various Utilities for Microbial Genomics and Metagenomics (Version 1.9.1)
2016
fDMA : Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes (Version 2.2.7)
2017
fst4pg : Genetic Distance Segmentation for Population Genetics (Version 1.0.0)
2022
fusedMGM : Implementation of Fused MGM to Infer 2-Class Networks (Version 0.1.2)
2023
gmodels : Various R Programming Tools for Model Fitting (Version 2.19.1)
2005
graphsim : Simulate Expression Data from 'igraph' Networks (Version 1.0.3)
2020
gtools : Various R Programming Tools (Version 3.9.5)
2005
hdbma : Bayesian Mediation Analysis with High-Dimensional Data (Version 1.0)
2023
heatmaply : Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' (Version 1.5.0)
2016
heplots : Visualizing Hypothesis Tests in Multivariate Linear Models (Version 1.7.1)
2007
httk : High-Throughput Toxicokinetics (Version 2.4.0)
2015
indirect : Elicitation of Independent Conditional Means Priors for Generalised Linear Models (Version 0.2.1)
2018
ionr : Test for Indifference of Indicator (Version 0.3.0)
2016
metaGE : Meta-Analysis for Detecting Genotype x Environment Associations (Version 1.1.0)
2023
metamicrobiomeR : Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects (Version 1.2)
2019
mlma : Multilevel Mediation Analysis (Version 6.3-1)
2015
mma : Multiple Mediation Analysis (Version 10.7-1)
2015
mmabig : Multiple Mediation Analysis for Big Data Sets (Version 3.2-0)
2018
multiUS : Functions for the Courses Multivariate Analysis and Computer Intensive Methods (Version 1.2.3)
2022
plotMCMC : MCMC Diagnostic Plots (Version 2.0.1)
2014
polimetrics : R Tools for Political Measures (Version 1.2.1.14)
2022
poliscidata : Datasets and Functions Featured in Pollock and Edwards, an R Companion to Essentials of Political Analysis, Second Edition (Version 2.3.0)
2016
r.jive : Perform JIVE Decomposition for Multi-Source Data (Version 2.4)
2015
r4ss : R Code for Stock Synthesis (Version 1.44.0)
2009
rSRD : Sum of Ranking Differences Statistical Test (Version 0.1.8)
2022
rattle : Graphical User Interface for Data Science in R (Version 5.5.1)
2013
rdi : Repertoire Dissimilarity Index (Version 1.0.0)
2018
scPloidy : Infer Ploidy of Single Cells (Version 0.6.2)
2022
sensitivity : Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.1)
2006
serieslcb : Lower Confidence Bounds for Binomial Series System (Version 0.4.0)
2018
sesem : Spatially Explicit Structural Equation Modeling (Version 1.0.2)
2014
shinyMobile : Mobile Ready 'shiny' Apps with Standalone Capabilities (Version 2.0.1)
2019
sigQC : Quality Control Metrics for Gene Signatures (Version 0.1.24)
2017
signatureSurvival : Signature Survival Analysis (Version 1.0.0)
2023
sim1000G : Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes (Version 1.40)
2017
swamp : Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations (Version 1.5.1)
2011
tmod : Feature Set Enrichment Analysis for Metabolomics and Transcriptomics (Version 0.50.13)
2015
vannstats : Simplified Statistics for PA 606 (Version 1.3.4.14)
2021
varrank : Heuristics Tools Based on Mutual Information for Variable Ranking (Version 0.5)
2018
washeR : Time Series Outlier Detection (Version 0.1.3)
2018
wilson : Web-Based Interactive Omics Visualization (Version 2.4.2)
2018
Showing 1-126 of 126
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