Referenced by ⇅
Year
ArchaeoPhases : Post-Processing of the Markov Chain Simulated by "ChronoModel",
"Oxcal" or "BCal" (Version 1.8)
2017
Biopeak : Identification of Impulse-Like Gene Expression Changes in Short
Genomic Series Data (Version 1.0)
2019
BNPMIXcluster : Bayesian Nonparametric Model for Clustering with Mixed Scale
Variables (Version 1.3)
2016
cancerTiming : Estimation of Temporal Ordering of Cancer Abnormalities (Version 3.1.8)
2012
corregp : Functions and Methods for Correspondence Regression (Version 2.0.2)
2015
CSFA : Connectivity Scores with Factor Analysis (Version 1.2.0)
2018
delaunay : 2d, 2.5d, and 3d Delaunay Tessellations (Version 2.0.0)
2022
highSCREEN : High-Throughput Screening for Plate Based Essays (Version 0.4)
2016
liayson : Linking Singe-Cell Transcriptomes Atween Contemporary
Subpopulation Genomes (Version 1.0.5)
2018
momr : Mining Metaomics Data (MetaOMineR) (Version 1.1)
2015
NBBttest : Negative Binomial Beta t-Test (Version 1.0.1)
2020
qat : Quality Assurance Toolkit (Version 0.74)
2011
ReorderCluster : Reordering the Dendrogram According to the Class Labels (Version 2.0)
2014
rich : Computes and Compares Species Richnesses (Version 1.0.1)
2011
GSNA : Gene Set Networking Analysis Package (Version 0.1.4.2)
2024
mlma : Multilevel Mediation Analysis (Version 6.3-1)
2015
BAMMtools : Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees (Version 2.1.11)
2014
BSPBSS : Bayesian Spatial Blind Source Separation (Version 1.0.5)
2022
BayesMultMeta : Bayesian Multivariate Meta-Analysis (Version 0.1.1)
2022
BayesianMediationA : Bayesian Mediation Analysis (Version 1.0.1)
2022
CJIVE : Canonical Joint and Individual Variation Explained (CJIVE) (Version 0.1.0)
2023
CTD : A Method for 'Connecting The Dots' in Weighted Graphs (Version 1.2)
2020
CoFRA : Complete Functional Regulation Analysis (Version 0.1002)
2016
CoNI : Correlation Guided Network Integration (CoNI) (Version 0.1.0)
2021
DNMF : Discriminant Non-Negative Matrix Factorization (Version 1.4.2)
2015
DPBBM : Dirichlet Process Beta-Binomial Mixture (Version 0.2.5)
2016
DandEFA : Dandelion Plot for R-Mode Exploratory Factor Analysis (Version 1.6)
2012
DensParcorr : Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks (Version 1.1)
2016
FAMetA : Fatty Acid Metabolic Analysis (Version 0.1.6)
2021
FLLat : Fused Lasso Latent Feature Model (Version 1.2-1)
2011
FRESA.CAD : Feature Selection Algorithms for Computer Aided Diagnosis (Version 3.4.7)
2014
HMP : Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP (Version 2.0.1)
2011
HistData : Data Sets from the History of Statistics and Data Visualization (Version 0.9-1)
2009
IPV : Item Pool Visualization (Version 1.0.0)
2020
KSEAapp : Kinase-Substrate Enrichment Analysis (Version 0.99.0)
2017
LSDirf : Impulse-Response Function Analysis for Agent-Based Models (Version 0.1.3)
2024
MAnorm2 : Tools for Normalizing and Comparing ChIP-seq Samples (Version 1.2.2)
2021
MDplot : Visualising Molecular Dynamics Analyses (Version 1.0.1)
2016
MKmisc : Miscellaneous Functions from M. Kohl (Version 1.9)
2008
MLZ : Mean Length-Based Estimators of Mortality using TMB (Version 0.1.4)
2018
MOQA : Basic Quality Data Assurance for Epidemiological Research (Version 2.0.0)
2017
MetProc : Separate Metabolites into Likely Measurement Artifacts and True Metabolites (Version 1.0.1)
2016
MetaIntegrator : Meta-Analysis of Gene Expression Data (Version 2.1.3)
2016
MetabolAnalyze : Probabilistic Latent Variable Models for Metabolomic Data (Version 1.3)
2010
MicrobiomeSurv : Biomarker Validation for Microbiome-Based Survival Classification and Prediction (Version 0.1.0)
2023
MigConnectivity : Estimate Migratory Connectivity for Migratory Animals (Version 0.4.7)
2024
MoBPS : Modular Breeding Program Simulator (Version 1.6.64)
2020
MultBiplotR : Multivariate Analysis Using Biplots in R (Version 23.11.0)
2021
MultiGroupO : MultiGroup Method and Simulation Data Analysis (Version 0.1.0)
2022
NCA : Necessary Condition Analysis (Version 4.0.1)
2015
OmicsPLS : Data Integration with Two-Way Orthogonal Partial Least Squares (Version 2.0.2)
2017
PRISMA : Protocol Inspection and State Machine Analysis (Version 0.2-7)
2012
Patterns : Deciphering Biological Networks with Patterned Heterogeneous Measurements (Version 1.4)
2019
RAMClustR : Mass Spectrometry Metabolomics Feature Clustering and Interpretation (Version 1.3.1)
2019
RCA : Relational Class Analysis (Version 2.0)
2013
RCDT : Fast 2D Constrained Delaunay Triangulation (Version 1.3.0)
2022
ROCR : Visualizing the Performance of Scoring Classifiers (Version 1.0-11)
2005
RPPanalyzer : Reads, Annotates, and Normalizes Reverse Phase Protein Array Data (Version 1.4.9)
2010
RcmdrPlugin.BiclustGUI : 'Rcmdr' Plug-in GUI for Biclustering (Version 1.1.3.1)
2016
RobMixReg : Robust Mixture Regression (Version 1.1.0)
2020
SAMtool : Stock Assessment Methods Toolkit (Version 1.6.4)
2021
SCINA : A Semi-Supervised Category Identification and Assignment Tool (Version 1.2.0)
2018
TIMP : Fitting Separable Nonlinear Models in Spectroscopy and Microscopy (Version 1.13.6)
2007
TopKLists : Inference, Aggregation and Visualization for Top-K Ranked Lists (Version 1.0.8)
2014
asymmetry : Multidimensional Scaling of Asymmetric Proximities (Version 2.0.4)
2016
bayess : Bayesian Essentials with R (Version 1.6)
2013
bingat : Binary Graph Analysis Tools (Version 1.3)
2014
boundingbox : Create a Bounding Box in an Image (Version 1.0.1)
2020
caroline : A Collection of Database, Data Structure, Visualization, and Utility Functions for R (Version 0.9.2)
2009
cellVolumeDist : Functions to Fit Cell Volume Distributions and Thereby Estimate Cell Growth Rates and Division Times (Version 1.4)
2009
clusternomics : Integrative Clustering for Heterogeneous Biomedical Datasets (Version 0.1.1)
2016
colordistance : Distance Metrics for Image Color Similarity (Version 1.1.2)
2017
condvis : Conditional Visualization for Statistical Models (Version 0.5-1)
2016
corkscrew : Preprocessor for Data Modeling (Version 1.1)
2015
corto : Inference of Gene Regulatory Networks (Version 1.2.4)
2019
covid19.analytics : Load and Analyze Live Data from the COVID-19 Pandemic (Version 2.1.3.3)
2020
crmReg : Cellwise Robust M-Regression and SPADIMO (Version 1.0.2)
2020
crqa : Unidimensional and Multidimensional Methods for Recurrence Quantification Analysis (Version 2.0.5)
2013
dartR.captive : Analysing 'SNP' Data to Support Captive Breeding (Version 0.75)
2023
dartR.base : Analysing 'SNP' and 'Silicodart' Data - Basic Functions (Version 0.65)
2023
dartR.popgen : Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 0.32)
2023
dartR.spatial : Applying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data (Version 0.78)
2023
dartR : Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis (Version 2.9.7)
2017
dendextend : Extending 'dendrogram' Functionality in R (Version 1.17.1)
2014
dendsort : Modular Leaf Ordering Methods for Dendrogram Nodes (Version 0.3.4)
2014
difconet : Differential Coexpressed Networks (Version 1.0-4)
2017
enveomics.R : Various Utilities for Microbial Genomics and Metagenomics (Version 1.9.1)
2016
fDMA : Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes (Version 2.2.7)
2017
fst4pg : Genetic Distance Segmentation for Population Genetics (Version 1.0.0)
2022
fusedMGM : Implementation of Fused MGM to Infer 2-Class Networks (Version 0.1.0.1)
2023
gmodels : Various R Programming Tools for Model Fitting (Version 2.19.1)
2005
graphsim : Simulate Expression Data from 'igraph' Networks (Version 1.0.3)
2020
gtools : Various R Programming Tools (Version 3.9.5)
2005
hdbma : Bayesian Mediation Analysis with High-Dimensional Data (Version 1.0)
2023
heatmaply : Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' (Version 1.5.0)
2016
heplots : Visualizing Hypothesis Tests in Multivariate Linear Models (Version 1.6.2)
2007
httk : High-Throughput Toxicokinetics (Version 2.3.1)
2015
indirect : Elicitation of Independent Conditional Means Priors for Generalised Linear Models (Version 0.2.1)
2018
ionr : Test for Indifference of Indicator (Version 0.3.0)
2016
metaGE : Meta-Analysis for Detecting Genotype x Environment Associations (Version 1.0.3)
2023
metamicrobiomeR : Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects (Version 1.2)
2019
mma : Multiple Mediation Analysis (Version 10.7-1)
2015
mmabig : Multiple Mediation Analysis for Big Data Sets (Version 3.2-0)
2018
multiUS : Functions for the Courses Multivariate Analysis and Computer Intensive Methods (Version 1.2.3)
2022
plotMCMC : MCMC Diagnostic Plots (Version 2.0.1)
2014
polimetrics : R Tools for Political Measures (Version 1.2.1.14)
2022
poliscidata : Datasets and Functions Featured in Pollock and Edwards, an R Companion to Essentials of Political Analysis, Second Edition (Version 2.3.0)
2016
r.jive : Perform JIVE Decomposition for Multi-Source Data (Version 2.4)
2015
r4ss : R Code for Stock Synthesis (Version 1.44.0)
2009
rSRD : Sum of Ranking Differences Statistical Test (Version 0.1.7)
2022
rattle : Graphical User Interface for Data Science in R (Version 5.5.1)
2013
rdi : Repertoire Dissimilarity Index (Version 1.0.0)
2018
scPloidy : Infer Ploidy of Single Cells (Version 0.3.0)
2022
sensitivity : Global Sensitivity Analysis of Model Outputs and Importance Measures (Version 1.30.0)
2006
serieslcb : Lower Confidence Bounds for Binomial Series System (Version 0.4.0)
2018
sesem : Spatially Explicit Structural Equation Modeling (Version 1.0.2)
2014
shinyMobile : Mobile Ready 'shiny' Apps with Standalone Capabilities (Version 1.0.1)
2019
sigQC : Quality Control Metrics for Gene Signatures (Version 0.1.23)
2017
signatureSurvival : Signature Survival Analysis (Version 1.0.0)
2023
sim1000G : Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes (Version 1.40)
2017
swamp : Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations (Version 1.5.1)
2011
tmod : Feature Set Enrichment Analysis for Metabolomics and Transcriptomics (Version 0.50.13)
2015
vannstats : Simplified Statistics for PA 606 (Version 1.3.4.14)
2021
varrank : Heuristics Tools Based on Mutual Information for Variable Ranking (Version 0.5)
2018
washeR : Time Series Outlier Detection (Version 0.1.3)
2018
wilson : Web-Based Interactive Omics Visualization (Version 2.4.2)
2018
Showing 1-126 of 126
RPKG Scholar presents a tabulation of an author's contribution in the development of R packages stored in the Comprehensive R Archive Network (CRAN).
Within this site, we consider package dependencies (suggests,imports,depends,enhances) as citations because we believe that using one's package to develop another is tantamount to citing the author of the package being imported, suggested or enhanced.
