dendextend: Extending 'dendrogram' Functionality in R

Canonical link: https://scholar.rpkg.net/pkg/dendextend

Tal Galili • Yoav Benjamini • Gavin Simpson • Gregory Jefferis (imported code from his dendroextras • package), • Marco Gallotta • Johan Renaudie • The R Core Team (Thanks for the Infastructure, and code in the • examples), • Kurt Hornik • Uwe Ligges • Andrej-Nikolai Spiess • Steve Horvath • Peter Langfelder • skullkey • Mark Van Der Loo • Andrie de Vries • Zuguang Gu • Cath • John Ma • Krzysiek G • Manuela Hummel • Chase Clark • Lucas Graybuck • jdetribol • Ben Ho • Samuel Perreault • Christian Hennig • David Bradley • Houyun Huang • Patrick Schupp • View description and downloads View dependencies GitHub project

2014 Published

1.17.1 Version

0 Citations

31 Authors

Referenced by ⇅	Year
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CALANGO: Comparative Analysis with Annotation-Based Genomic Components (Version 1.0.16)	2021
CINNA: Deciphering Central Informative Nodes in Network Analysis (Version 1.2.2)	2017
ClustAssess: Tools for Assessing Clustering (Version 0.3.0)	2021
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DatabionicSwarm: Swarm Intelligence for Self-Organized Clustering (Version 1.2.1)	2017
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EnsCat: Clustering of Categorical Data (Version 1.1)	2017
FCPS: Fundamental Clustering Problems Suite (Version 1.3.4)	2020
GaMaBioMD: Diversity Analysis for Sequence Data (Version 0.2.0)	2024
HCD: Hierarchical Community Detection by Recursive Partitioning (Version 1.0)	2019
IncDTW: Incremental Calculation of Dynamic Time Warping (Version 1.1.4.4)	2017
Mercator: Clustering and Visualizing Distance Matrices (Version 1.1.2)	2019
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PdPDB: Pattern Discovery in PDB Structures of Metalloproteins (Version 2.0.1)	2016
ProjectionBasedClustering: Projection Based Clustering (Version 1.2.1)	2017
SISIR: Select Intervals Suited for Functional Regression (Version 0.2.2)	2020
adjclust: Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix (Version 0.6.9)	2017
celltrackR: Motion Trajectory Analysis (Version 1.2.0)	2020
circlize: Circular Visualization (Version 0.4.16)	2013
conos: Clustering on Network of Samples (Version 1.5.2)	2021
dbscan: Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms (Version 1.1-12)	2015
ecan: Ecological Analysis and Visualization (Version 0.2.1)	2023
factoextra: Extract and Visualize the Results of Multivariate Data Analyses (Version 1.0.7)	2016
heatmaply: Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' (Version 1.5.0)	2016
hfr: Estimate Hierarchical Feature Regression Models (Version 0.7.1)	2022
isocat: Isotope Origin Clustering and Assignment Tools (Version 0.3.0)	2019
kanjistat: A Statistical Framework for the Analysis of Japanese Kanji Characters (Version 0.9.1)	2023
kmer: Fast K-Mer Counting and Clustering for Biological Sequence Analysis (Version 1.1.2)	2018
ldaPrototype: Prototype of Multiple Latent Dirichlet Allocation Runs (Version 0.3.1)	2020
mFD: Compute and Illustrate the Multiple Facets of Functional Diversity (Version 1.0.7)	2021
mappoly: Genetic Linkage Maps in Autopolyploids (Version 0.4.1)	2020
mdendro: Extended Agglomerative Hierarchical Clustering (Version 2.2.1)	2018
metaprotr: Metaproteomics Post-Processing Analysis (Version 1.2.2)	2021
numbat: Haplotype-Aware CNV Analysis from scRNA-Seq (Version 1.4.0)	2022
onemap: Construction of Genetic Maps in Experimental Crosses (Version 3.0.0)	2008
phylogram: Dendrograms for Evolutionary Analysis (Version 2.1.0)	2017
plotly: Create Interactive Web Graphics via 'plotly.js' (Version 4.10.4)	2015
protti: Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools (Version 0.8.0)	2021
rSAFE: Surrogate-Assisted Feature Extraction (Version 0.1.4)	2021
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rare: Linear Model with Tree-Based Lasso Regularization for Rare Features (Version 0.1.1)	2018
rnmamod: Bayesian Network Meta-Analysis with Missing Participants (Version 0.4.0)	2021
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segregation: Entropy-Based Segregation Indices (Version 1.1.0)	2018
seriation: Infrastructure for Ordering Objects Using Seriation (Version 1.5.4)	2007
sharpshootR: A Soil Survey Toolkit (Version 2.3)	2014
sits: Satellite Image Time Series Analysis for Earth Observation Data Cubes (Version 1.4.2-1)	2022
spiralize: Visualize Data on Spirals (Version 1.0.6)	2021
tidyHeatmap: A Tidy Implementation of Heatmap (Version 1.8.1)	2020
tsibbletalk: Interactive Graphics for Tsibble Objects (Version 0.1.0)	2020
uclust: Clustering and Classification Inference with U-Statistics (Version 1.0.0)	2019
visxhclust: A Shiny App for Visual Exploration of Hierarchical Clustering (Version 1.1.0)	2021

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