TMB: Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'

Canonical link: https://rscholar.com/pkg/TMB

Kasper Kristensen • Brad Bell • Hans Skaug • Arni Magnusson • Casper Berg • Anders Nielsen • Martin Maechler • Theo Michelot • Mollie Brooks • Alex Forrence • Christoffer Moesgaard Albertsen • Cole Monnahan • View description and downloads View dependencies GitHub project

2015 Published

1.9.15 Version

0 Citations

12 Authors

Referenced by ⇅	Year
mumm: Multiplicative Mixed Models using the Template Model Builder (Version 0.2.1)	2018
yaps: Track Estimation using YAPS (Yet Another Positioning Solver) (Version 1.2.5)	2021
stochvolTMB: Likelihood Estimation of Stochastic Volatility Models (Version 0.2.0)	2020
broom.mixed: Tidying Methods for Mixed Models (Version 0.2.9.6)	2018
ASMbook: Functions for the Book "Applied Statistical Modeling for Ecologists" (Version 1.0.2)	2024
BayesGP: Efficient Implementation of Gaussian Process in Bayesian Hierarchical Models (Version 0.1.3)	2024
DLMtool: Data-Limited Methods Toolkit (Version 6.0.6)	2014
FRK: Fixed Rank Kriging (Version 2.3.1)	2017
GeoAdjust: Accounting for Random Displacements of True GPS Coordinates of Data (Version 2.0.0)	2023
LocalCop: Local Likelihood Inference for Conditional Copula Models (Version 0.0.2)	2024
MLZ: Mean Length-Based Estimators of Mortality using TMB (Version 0.1.5)	2018
MSEtool: Management Strategy Evaluation Toolkit (Version 3.7.3)	2018
QFASA: Quantitative Fatty Acid Signature Analysis (Version 1.2.1)	2016
RTMB: 'R' Bindings for 'TMB' (Version 1.6)	2023
SAMtool: Stock Assessment Methods Toolkit (Version 1.8.0)	2021
SPAS: Stratified-Petersen Analysis System (Version 2024.1.31)	2019
SpatialGEV: Fit Spatial Generalized Extreme Value Models (Version 1.0.1)	2022
adnuts: No-U-Turn MCMC Sampling for 'ADMB' Models (Version 1.1.2)	2018
bage: Bayesian Estimation and Forecasting of Age-Specific Rates (Version 0.7.4)	2024
clustTMB: Spatio-Temporal Finite Mixture Model using 'TMB' (Version 0.1.0)	2024
covafillr: Local Polynomial Regression of State Dependent Covariates in State-Space Models (Version 0.4.4)	2016
disaggregation: Disaggregation Modelling (Version 0.4.0)	2019
dsem: Fit Dynamic Structural Equation Models (Version 1.3.0)	2023
ecostate: State-Space Mass-Balance Model for Marine Ecosystems (Version 0.2.0)	2024
ef: Modelling Framework for the Estimation of Salmonid Abundance (Version 1.2.0)	2020
epigrowthfit: Nonlinear Mixed Effects Models of Epidemic Growth (Version 0.15.3)	2024
fishmethods: Fishery Science Methods and Models (Version 1.12-1)	2009
gadget3: Globally-Applicable Area Disaggregated General Ecosystem Toolbox V3 (Version 0.12-1)	2022
gllvm: Generalized Linear Latent Variable Models (Version 2.0)	2017
glmmTMB: Generalized Linear Mixed Models using Template Model Builder (Version 1.1.10)	2017
hmmTMB: Fit Hidden Markov Models using Template Model Builder (Version 1.0.2)	2023
insight: Easy Access to Model Information for Various Model Objects (Version 1.0.0)	2019
marked: Mark-Recapture Analysis for Survival and Abundance Estimation (Version 1.2.8)	2013
mmrm: Mixed Models for Repeated Measures (Version 0.3.14)	2022
parameters: Processing of Model Parameters (Version 0.24.0)	2019
phylosem: Phylogenetic Structural Equation Model (Version 1.1.4)	2023
sdmTMB: Spatial and Spatiotemporal SPDE-Based GLMMs with 'TMB' (Version 0.6.0)	2023
sjPlot: Data Visualization for Statistics in Social Science (Version 2.8.17)	2013
ssdtools: Species Sensitivity Distributions (Version 2.1.0)	2018
stelfi: Hawkes and Log-Gaussian Cox Point Processes Using Template Model Builder (Version 1.0.1)	2022
tmbstan: MCMC Sampling from 'TMB' Model Object using 'Stan' (Version 1.0.91)	2017
tramME: Transformation Models with Mixed Effects (Version 1.0.7)	2020
tsdistributions: Location Scale Standardized Distributions (Version 1.0.2)	2024
tsgarch: Univariate GARCH Models (Version 1.0.3)	2024
unmarked: Models for Data from Unmarked Animals (Version 1.4.3)	2010

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