Referenced by ⇅
Year
clusterPower : Power Calculations for Cluster-Randomized and Cluster-Randomized
Crossover Trials (Version 0.7.0)
2011
cRegulome : Obtain and Visualize Regulome-Gene Expression Correlations in
Cancer (Version 0.3.2)
2018
plotKML : Visualization of Spatial and Spatio-Temporal Objects in Google
Earth (Version 0.8-3)
2012
ruta : Implementation of Unsupervised Neural Architectures (Version 1.2.0)
2018
simPATHy : A Method for Simulating Data from Perturbed Biological Pathways (Version 0.6)
2016
TrustVDJ : Tools for Immune Repertoire Analysis (Version 0.1.0)
2022
xQTLbiolinks : Integrative Analysis of Quantitative Trait Locus Data of "xQTL" (Version 1.6.2)
2022
filibustr : Data Utilities for Congressional Research (Version 0.2.1)
2024
changeRangeR : Change Metrics for Species Geographic Ranges (Version 1.1.0)
2022
odbr : Download Data from Brazil's Origin Destination Surveys (Version 0.1.0)
2023
edgar : Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings (Version 2.0.7)
2015
epiCleanr : A Tidy Solution for Epidemiological Data (Version 0.2.0)
2023
ACNE : Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization (Version 0.9.1)
2011
AIFFtools : Read AIFF Files and Convert to WAVE Format (Version 1.0)
2024
ActivityIndex : Activity Index Calculation using Raw 'Accelerometry' Data (Version 0.3.7)
2018
BATSS : Bayesian Adaptive Trial Simulator Software (BATSS) for Generalised Linear Models (Version 1.0.0)
2024
BeeBDC : Occurrence Data Cleaning (Version 1.2.0)
2023
CB2 : CRISPR Pooled Screen Analysis using Beta-Binomial Test (Version 1.3.4)
2019
COVID19 : R Interface to COVID-19 Data Hub (Version 3.0.3)
2020
ChemoSpec : Exploratory Chemometrics for Spectroscopy (Version 6.1.10)
2011
ChemoSpec2D : Exploratory Chemometrics for 2D Spectroscopy (Version 0.5.0)
2018
CoronaNetR : API Access to 'CoronaNet' Data (Version 0.3.0)
2023
DIZtools : Lightweight Utilities for 'DIZ' R Package Development (Version 1.0.1)
2022
DatabaseConnector : Connecting to Various Database Platforms (Version 6.3.2)
2018
EEM : Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data (Version 1.1.1)
2015
Eagle : Multiple Locus Association Mapping on a Genome-Wide Scale (Version 2.5)
2017
EpiNow2 : Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters (Version 1.6.0)
2020
FAMoS : A Flexible Algorithm for Model Selection (Version 0.3.0)
2018
FCPS : Fundamental Clustering Problems Suite (Version 1.3.4)
2020
FSK2R : An Interface Between the 'FSKX' Standard and 'R' (Version 0.1.3)
2020
GSED : Group Sequential Enrichment Design (Version 2.6)
2016
GSODR : Global Surface Summary of the Day ('GSOD') Weather Data Client (Version 4.1.3)
2016
GWASinspector : Comprehensive and Easy to Use Quality Control of GWAS Results (Version 1.7.1)
2019
LSPFP : Lysate and Secretome Peptide Feature Plotter (Version 1.0.3)
2016
MIMSunit : Algorithm to Compute Monitor Independent Movement Summary Unit (MIMS-Unit) (Version 0.11.2)
2020
NEONiso : Tools to Calibrate and Work with NEON Atmospheric Isotope Data (Version 0.7.0)
2021
NMsim : Seamless 'Nonmem' Simulation Platform (Version 0.1.3)
2023
PAMhm : Generate Heatmaps Based on Partitioning Around Medoids (PAM) (Version 0.1.2)
2021
PSCBS : Analysis of Parent-Specific DNA Copy Numbers (Version 0.67.0)
2011
PhenotypeSimulator : Flexible Phenotype Simulation from Different Genetic and Noise Models (Version 0.3.4)
2017
PopGenReport : A Simple Framework to Analyse Population and Landscape Genetic Data (Version 3.1)
2012
PvSTATEM : Reading, Quality Control and Preprocessing of MBA (Multiplex Bead Assay) Data (Version 0.0.4)
2024
QGameTheory : Quantum Game Theory Simulator (Version 0.1.2)
2020
R.cache : Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations (Version 0.16.0)
2007
R.devices : Unified Handling of Graphics Devices (Version 2.17.2)
2012
R.filesets : Easy Handling of and Access to Files Organized in Structured Directories (Version 2.15.1)
2009
R.huge : Methods for Accessing Huge Amounts of Data [deprecated] (Version 0.10.1)
2007
R.matlab : Read and Write MAT Files and Call MATLAB from Within R (Version 3.7.0)
2005
R.rsp : Dynamic Generation of Scientific Reports (Version 0.46.0)
2006
RAINBOWR : Genome-Wide Association Study with SNP-Set Methods (Version 0.1.35)
2019
ROI.models.miplib : 'ROI' Access to 'MIPLIB' 2010 Benchmark Instances (Version 1.0-0)
2017
RPANDA : Phylogenetic ANalyses of DiversificAtion (Version 2.3)
2014
RRphylo : Phylogenetic Ridge Regression Methods for Comparative Studies (Version 2.8.1)
2018
ReporterScore : Generalized Reporter Score-Based Enrichment Analysis for Omics Data (Version 0.1.8)
2024
SEMID : Identifiability of Linear Structural Equation Models (Version 0.4.1)
2013
SMDIC : Identification of Somatic Mutation-Driven Immune Cells (Version 0.1.6)
2020
SensusR : Sensus Analytics (Version 2.3.1)
2015
Seurat : Tools for Single Cell Genomics (Version 5.1.0)
2017
SimDesign : Structure for Organizing Monte Carlo Simulation Designs (Version 2.17.1)
2015
TheOpenAIR : Integrate 'OpenAI' Large Language Models into Your 'R' Workflows (Version 0.1.0)
2023
acc : Exploring Accelerometer Data (Version 1.3.3)
2015
acnr : Annotated Copy-Number Regions (Version 1.0.0)
2014
acroname : Engine for Acronyms and Initialisms (Version 0.1.0)
2021
adjustedCurves : Confounder-Adjusted Survival Curves and Cumulative Incidence Functions (Version 0.11.2)
2022
alphahull : Generalization of the Convex Hull of a Sample of Points in the Plane (Version 2.5)
2022
animate : A Web-Based Graphics Device for Animated Visualisations (Version 0.3.9.4)
2023
aplotExtra : Creating Composite Plots using 'aplot' (Version 0.0.2)
2023
arc : Association Rule Classification (Version 1.4)
2016
arkdb : Archive and Unarchive Databases Using Flat Files (Version 0.0.18)
2018
aroma.affymetrix : Analysis of Large Affymetrix Microarray Data Sets (Version 3.2.2)
2009
aroma.apd : A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] (Version 0.7.0)
2009
aroma.core : Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework (Version 3.3.1)
2009
aroma.cn : Copy-Number Analysis of Large Microarray Data Sets (Version 1.7.1)
2010
ausplotsR : TERN AusPlots Australian Ecosystem Monitoring Data (Version 2.0.5)
2020
babel : Ribosome Profiling Data Analysis (Version 0.3-0)
2013
bbmix : Bayesian Model for Genotyping using RNA-Seq (Version 1.0.0)
2023
bedr : Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix' (Version 1.0.7)
2015
bigstep : Stepwise Selection for Large Data Sets (Version 1.1.1)
2016
bigsnpr : Analysis of Massive SNP Arrays (Version 1.12.15)
2017
biomartr : Genomic Data Retrieval (Version 1.0.7)
2015
calmate : Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation (Version 0.13.0)
2011
casabourse : Casablanca Stock Exchange Data (Version 2.0.0)
2022
chillR : Statistical Methods for Phenology Analysis in Temperate Fruit Trees (Version 0.75)
2013
cifti : Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files (Version 0.4.5)
2017
civis : R Client for the 'Civis Platform API' (Version 3.1.2)
2017
cmdfun : Framework for Building Interfaces to Shell Commands (Version 1.0.2)
2020
cmsaf : A Toolbox for CM SAF NetCDF Data (Version 3.5.2)
2015
cometr : 'Comet' API for R (Version 0.4.0)
2020
data.table : Extension of 'data.frame' (Version 1.16.2)
2006
ddtlcm : Latent Class Analysis with Dirichlet Diffusion Tree Process Prior (Version 0.2.1)
2023
delayed : A Framework for Parallelizing Dependent Tasks (Version 0.5.0)
2020
detrendr : Detrend Images (Version 0.6.15)
2017
dgpsi : Interface to 'dgpsi' for Deep and Linked Gaussian Process Emulations (Version 2.4.0)
2022
downsize : A Tool to Downsize Large Analysis Projects for Testing (Version 0.2.3)
2016
dplR : Dendrochronology Program Library in R (Version 1.7.7)
2007
dwdradar : Read Binary Radar Files from 'DWD' (German Weather Service) (Version 0.2.10)
2019
dycdtools : Calibration Assistant and Post-Processing Tool for Aquatic Ecosystem Model DYRESM-CAEDYM (Version 0.4.4)
2020
easyclimate : Easy Access to High-Resolution Daily Climate Data for Europe (Version 0.2.1)
2023
eurodata : Fast and Easy Eurostat Data Import and Search (Version 1.7.0)
2022
evclass : Evidential Distance-Based Classification (Version 2.0.2)
2016
evclust : Evidential Clustering (Version 2.0.3)
2016
expowo : Data Mining of Plant Diversity and Distribution (Version 2.0)
2023
ezknitr : Avoid the Typical Working Directory Pain When Using 'knitr' (Version 0.6.3)
2015
fastai : Interface to 'fastai' (Version 2.2.2)
2020
findInGit : Find Pattern in Files of All Branches of a 'git' Repository (Version 0.1.1)
2021
fitlandr : Fit Vector Fields and Potential Landscapes from Intensive Longitudinal Data (Version 0.1.0)
2023
fitteR : Fit Hundreds of Theoretical Distributions to Empirical Data (Version 0.2.0)
2017
flexrsurv : Flexible Relative Survival Analysis (Version 2.0.18)
2016
freesurfer : Wrapper Functions for 'Freesurfer' (Version 1.6.10)
2016
fscache : File System Cache (Version 1.0.5)
2024
fslr : Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB') (Version 2.25.3)
2014
gamstransfer : A Data Interface Between 'GAMS' and R (Version 3.0.4)
2024
gde : GBIF Dataset Explorer (Version 0.2.1)
2020
geneExpressionFromGEO : Easily Downloads a Gene Expression Dataset from a GEO Code and Retrieves the Gene Symbols of Its Probesets (Version 0.9)
2020
geno2proteo : Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci (Version 0.0.6)
2017
geodata : Download Geographic Data (Version 0.6-2)
2021
gifti : Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information (Version 0.8.0)
2017
gofCopula : Goodness-of-Fit Tests for Copulae (Version 0.4-1)
2015
growthcleanr : Data Cleaner for Anthropometric Measurements (Version 2.2.0)
2022
grwat : River Hydrograph Separation and Analysis (Version 0.0.4)
2022
hoardeR : Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices (Version 0.10)
2014
homologene : Quick Access to Homologene and Gene Annotation Updates (Version 1.4.68.19.3.27)
2018
htmldf : Simple Scraping and Tidy Webpage Summaries (Version 0.6.0)
2020
iClusterVB : Fast Integrative Clustering and Feature Selection for High Dimensional Data (Version 0.1.2)
2024
iimi : Identifying Infection with Machine Intelligence (Version 1.1.1)
2024
imagefluency : Image Statistics Based on Processing Fluency (Version 0.2.5)
2019
immunaut : Machine Learning Immunogenicity and Vaccine Response Analysis (Version 1.0.1)
2024
installr : Using R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!) (Version 0.23.4)
2013
intSDM : Reproducible Integrated Species Distribution Models Across Norway using 'INLA' (Version 2.1.0)
2022
isobxr : Stable Isotope Box Modelling in R (Version 2.0.0)
2021
jagstargets : Targets for JAGS Pipelines (Version 1.2.1)
2021
joinXL : Perform Joins or Minus Queries on 'Excel' Files (Version 1.0.1)
2016
jrc : Exchange Commands Between R and 'JavaScript' (Version 0.6.0)
2019
jsTreeR : A Wrapper of the JavaScript Library 'jsTree' (Version 2.6.0)
2020
kaigiroku : Programmatic Access to the API for Japanese Diet Proceedings (Version 0.5)
2022
kidsides : Download, Cache, and Connect to KidSIDES (Version 0.5.0)
2023
kmeRtone : Multi-Purpose and Flexible k-Meric Enrichment Analysis Software (Version 1.0)
2024
latrend : A Framework for Clustering Longitudinal Data (Version 1.6.1)
2020
lboxcox : Implementation of Logistic Box-Cox Regression (Version 1.2)
2022
link2GI : Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools (Version 0.6-1)
2017
listenv : Environments Behaving (Almost) as Lists (Version 0.9.1)
2015
logger : A Lightweight, Modern and Flexible Logging Utility (Version 0.4.0)
2019
macrocol : Colombian Macro-Financial Time Series Generator (Version 0.1.0)
2022
maestro : Orchestration of Data Pipelines (Version 0.3.0)
2024
mailR : A Utility to Send Emails from R (Version 0.8)
2014
manhplot : The Manhattan++ Plot (Version 1.1)
2019
mcparallelDo : A Simplified Interface for Running Commands on Parallel Processes (Version 1.1.0)
2015
mglasso : Multiscale Graphical Lasso (Version 0.1.2)
2022
namedropR : Create Visual Citations for Presentations and Posters (Version 2.4.1)
2022
nc : Named Capture to Data Tables (Version 2024.9.20)
2019
neo4jshell : Querying and Managing 'Neo4J' Databases in 'R' (Version 0.1.2)
2020
neonUtilities : Utilities for Working with NEON Data (Version 2.4.2)
2018
neonstore : NEON Data Store (Version 0.5.1)
2020
networktools : Tools for Identifying Important Nodes in Networks (Version 1.5.2)
2017
neurobase : 'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects (Version 1.32.4)
2016
nhdplusTools : NHDPlus Tools (Version 1.2.1)
2019
nodbi : 'NoSQL' Database Connector (Version 0.10.7)
2018
numbat : Haplotype-Aware CNV Analysis from scRNA-Seq (Version 1.4.2)
2022
oce : Analysis of Oceanographic Data (Version 1.8-3)
2009
osrmr : Wrapper for the 'OSRM' API (Version 0.1.36)
2018
ottrpal : Companion Tools for Open-Source Tools for Training Resources (OTTR) (Version 1.2.1)
2022
packageRank : Computation and Visualization of Package Download Counts and Percentile Ranks (Version 0.9.3)
2019
pagoda2 : Single Cell Analysis and Differential Expression (Version 1.0.12)
2021
pathfindR : Enrichment Analysis Utilizing Active Subnetworks (Version 2.4.1)
2018
pins : Pin, Discover, and Share Resources (Version 1.4.0)
2019
plinkQC : Genotype Quality Control with 'PLINK' (Version 0.3.4)
2018
plotHMM : Plot Hidden Markov Models (Version 2023.8.28)
2022
pmparser : Create and Maintain a Relational Database of Data from PubMed/MEDLINE (Version 1.0.20)
2022
portfolioBacktest : Automated Backtesting of Portfolios over Multiple Datasets (Version 0.4.1)
2019
poweRbal : Phylogenetic Tree Models and the Power of Tree Shape Statistics (Version 0.0.1.1)
2024
protti : Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools (Version 0.9.1)
2021
pubtatordb : Create and Query a Local 'PubTator' Database (Version 0.1.4)
2019
rCBA : CBA Classifier (Version 0.4.3)
2015
rCNV : Detect Copy Number Variants from SNPs Data (Version 1.3.0)
2022
rbiom : Read/Write, Transform, and Summarize 'BIOM' Data (Version 1.0.3)
2020
rddapp : Regression Discontinuity Design Application (Version 1.3.2)
2017
rdomains : Get the Category of Content Hosted by a Domain (Version 0.2.1)
2016
rdwd : Select and Download Climate Data from 'DWD' (German Weather Service) (Version 1.8.0)
2017
read.gt3x : Parse 'ActiGraph' 'GT3X'/'GT3X+' 'Accelerometer' Data (Version 1.2.0)
2021
readmoRe : Utilities for Importing and Manipulating Biomedical Data Files (Version 0.2-12)
2021
rechaRge : HydroBudget – Groundwater Recharge Model (Version 1.0.0)
2024
regtools : Regression and Classification Tools (Version 1.7.0)
2016
rehh : Searching for Footprints of Selection using 'Extended Haplotype Homozygosity' Based Tests (Version 3.2.2)
2012
reproducible : Enhance Reproducibility of R Code (Version 2.1.0)
2017
restez : Create and Query a Local Copy of 'GenBank' in R (Version 2.1.4)
2018
rio : A Swiss-Army Knife for Data I/O (Version 1.2.3)
2013
rutifier : Chilean Rol Unico Tributario (Version 1.0.4)
2020
sdmpredictors : Species Distribution Modelling Predictor Datasets (Version 0.2.15)
2016
seeker : Simplified Fetching and Processing of Microarray and RNA-Seq Data (Version 1.1.6)
2022
seeds : Estimate Hidden Inputs using the Dynamic Elastic Net (Version 0.9.1)
2020
shinydbauth : Simple Authentification for 'shiny' Applications (Version 1.0.0.1)
2023
shinydrive : File Sharing Shiny Module (Version 0.1.3)
2021
shinymanager : Authentication Management for 'Shiny' Applications (Version 1.0.410)
2019
sigminer : Extract, Analyze and Visualize Mutational Signatures for Genomic Variations (Version 2.3.1)
2019
snplist : Tools to Create Gene Sets (Version 0.18.2)
2013
starter : Starter Kit for New Projects (Version 0.1.16)
2021
studentlife : Tidy Handling and Navigation of the Student-Life Dataset (Version 1.1.0)
2019
tLagInterim : Interim Monitoring of Clinical Trials with Time-Lagged Outcome (Version 1.0)
2022
tLagPropOdds : Proportional Odds Model with Censored, Time-Lagged Categorical Outcome (Version 1.9)
2021
tablet : Tabulate Descriptive Statistics in Multiple Formats (Version 0.6.11)
2021
targets : Dynamic Function-Oriented 'Make'-Like Declarative Pipelines (Version 1.8.0)
2021
taxonomizr : Functions to Work with NCBI Accessions and Taxonomy (Version 0.10.6)
2017
tinyProject : A Lightweight Template for Data Analysis Projects (Version 0.6.1)
2017
tinyscholar : Get and Show Personal 'Google Scholar' Profile (Version 0.1.7)
2020
todor : Find All TODO Comments and More (Version 0.1.2)
2019
understandBPMN : Calculator of Understandability Metrics for BPMN (Version 1.1.1)
2018
voice : Tools for Voice Analysis, Speaker Recognition and Mood Inference (Version 0.4.21)
2022
wearables : Tools to Read and Convert Wearables Data (Version 0.8.1)
2021
wrProteo : Proteomics Data Analysis Functions (Version 1.12.0)
2020
Showing 1-209 of 209
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